Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
MT-ND1P03886 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
MT-ND1P03886 RPL31P11-201ENST00000426558 1558 ntBASIC5.8□□□□□ -1.48
MT-ND1P03886 SLC25A30-204ENST00000519676 3670 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
MT-ND1P03886 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
MT-ND1P03886 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC5.8□□□□□ -1.48
MT-ND1P03886 AL391704.1-201ENST00000422206 2368 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
MT-ND1P03886 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
MT-ND1P03886 TAF12-202ENST00000373824 1334 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
MT-ND1P03886 LYPD6B-202ENST00000409029 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
MT-ND1P03886 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC5.8□□□□□ -1.48
MT-ND1P03886 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
MT-ND1P03886 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
MT-ND1P03886 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
MT-ND1P03886 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC5.8□□□□□ -1.48
MT-ND1P03886 RNU1-5P-201ENST00000362684 144 ntBASIC5.8□□□□□ -1.48
MT-ND1P03886 AL121977.1-201ENST00000401636 979 ntBASIC5.8□□□□□ -1.48
MT-ND1P03886 SMC4P1-201ENST00000414479 527 ntBASIC5.8□□□□□ -1.48
MT-ND1P03886 AC233728.1-201ENST00000418049 218 ntTSL 5 BASIC5.8□□□□□ -1.48
MT-ND1P03886 AL355994.1-201ENST00000424379 260 ntBASIC5.8□□□□□ -1.48
MT-ND1P03886 AC092106.2-201ENST00000436597 487 ntBASIC5.8□□□□□ -1.48
MT-ND1P03886 BMS1P11-201ENST00000442351 885 ntBASIC5.8□□□□□ -1.48
MT-ND1P03886 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC5.8□□□□□ -1.48
MT-ND1P03886 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC5.8□□□□□ -1.48
MT-ND1P03886 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC5.8□□□□□ -1.48
MT-ND1P03886 LINC01364-201ENST00000452509 889 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
MT-ND1P03886 TREML3P-201ENST00000457327 501 ntBASIC5.8□□□□□ -1.48
MT-ND1P03886 BMS1P9-201ENST00000457640 885 ntBASIC5.8□□□□□ -1.48
MT-ND1P03886 RNU7-157P-201ENST00000459600 66 ntBASIC5.8□□□□□ -1.48
MT-ND1P03886 AC090058.1-201ENST00000498788 435 ntBASIC5.8□□□□□ -1.48
MT-ND1P03886 AC093870.1-201ENST00000506837 213 ntBASIC5.8□□□□□ -1.48
MT-ND1P03886 AC094105.1-201ENST00000509745 560 ntTSL 4 BASIC5.8□□□□□ -1.48
MT-ND1P03886 MINOS1P4-201ENST00000515470 318 ntBASIC5.8□□□□□ -1.48
MT-ND1P03886 IGHVIII-47-1-201ENST00000518187 331 ntBASIC5.8□□□□□ -1.48
MT-ND1P03886 AZIN1-AS1-211ENST00000520455 480 ntTSL 3 BASIC5.8□□□□□ -1.48
MT-ND1P03886 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC5.8□□□□□ -1.48
MT-ND1P03886 AC005833.3-202ENST00000544741 770 ntAPPRIS P1 TSL 3 BASIC5.8□□□□□ -1.48
MT-ND1P03886 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
MT-ND1P03886 RNU4ATAC-201ENST00000580972 127 ntBASIC5.8□□□□□ -1.48
MT-ND1P03886 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC5.8□□□□□ -1.48
MT-ND1P03886 ZNF431-203ENST00000594425 610 ntTSL 2 BASIC5.8□□□□□ -1.48
MT-ND1P03886 AL078624.2-201ENST00000605063 554 ntBASIC5.8□□□□□ -1.48
MT-ND1P03886 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC5.8□□□□□ -1.48
MT-ND1P03886 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC5.8□□□□□ -1.48
MT-ND1P03886 LINC02495-203ENST00000636704 242 ntBASIC5.8□□□□□ -1.48
MT-ND1P03886 OR7A1P-202ENST00000641542 1158 ntBASIC5.8□□□□□ -1.48
MT-ND1P03886 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
MT-ND1P03886 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
MT-ND1P03886 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
MT-ND1P03886 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
MT-ND1P03886 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC5.8□□□□□ -1.48
MT-ND1P03886 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC5.8□□□□□ -1.48
MT-ND1P03886 AC005702.3-201ENST00000585345 1447 ntBASIC5.8□□□□□ -1.48
MT-ND1P03886 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
MT-ND1P03886 HCFC2P1-201ENST00000392864 1592 ntBASIC5.8□□□□□ -1.48
MT-ND1P03886 AC114876.1-201ENST00000490962 1366 ntBASIC5.8□□□□□ -1.48
MT-ND1P03886 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC5.8□□□□□ -1.48
MT-ND1P03886 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
MT-ND1P03886 AC004023.1-201ENST00000561473 1744 ntBASIC5.79□□□□□ -1.48
MT-ND1P03886 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
MT-ND1P03886 SMG1P5-202ENST00000529428 4219 ntBASIC5.79□□□□□ -1.48
MT-ND1P03886 SMG1P2-201ENST00000566127 4221 ntBASIC5.79□□□□□ -1.48
MT-ND1P03886 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC5.79□□□□□ -1.48
MT-ND1P03886 AL355834.1-201ENST00000556602 3965 ntBASIC5.79□□□□□ -1.48
MT-ND1P03886 LINC01205-201ENST00000489670 1331 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
MT-ND1P03886 AL121985.1-201ENST00000598917 1308 ntTSL 5 BASIC5.79□□□□□ -1.48
MT-ND1P03886 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC5.79□□□□□ -1.48
MT-ND1P03886 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
MT-ND1P03886 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
MT-ND1P03886 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
MT-ND1P03886 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
MT-ND1P03886 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
MT-ND1P03886 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
MT-ND1P03886 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
MT-ND1P03886 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
MT-ND1P03886 AC010894.1-201ENST00000313760 361 ntBASIC5.79□□□□□ -1.48
MT-ND1P03886 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
MT-ND1P03886 SNORD16-201ENST00000362803 99 ntBASIC5.79□□□□□ -1.48
MT-ND1P03886 NACAP7-201ENST00000407371 609 ntBASIC5.79□□□□□ -1.48
MT-ND1P03886 XIST-201ENST00000416330 750 ntTSL 2 BASIC5.79□□□□□ -1.48
MT-ND1P03886 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC5.79□□□□□ -1.48
MT-ND1P03886 RPL12P16-201ENST00000431098 498 ntBASIC5.79□□□□□ -1.48
MT-ND1P03886 IGLV3-4-201ENST00000432300 244 ntBASIC5.79□□□□□ -1.48
MT-ND1P03886 LRRC23-208ENST00000436789 796 ntTSL 3 BASIC5.79□□□□□ -1.48
MT-ND1P03886 COL11A2P1-205ENST00000441798 676 ntBASIC5.79□□□□□ -1.48
MT-ND1P03886 AC016908.1-201ENST00000442571 1219 ntBASIC5.79□□□□□ -1.48
MT-ND1P03886 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC5.79□□□□□ -1.48
MT-ND1P03886 OR52I1-201ENST00000450052 1050 ntBASIC5.79□□□□□ -1.48
MT-ND1P03886 SLAMF6P1-201ENST00000451067 602 ntBASIC5.79□□□□□ -1.48
MT-ND1P03886 RANP2-201ENST00000456833 229 ntBASIC5.79□□□□□ -1.48
MT-ND1P03886 RN7SL655P-201ENST00000486087 298 ntBASIC5.79□□□□□ -1.48
MT-ND1P03886 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC5.79□□□□□ -1.48
MT-ND1P03886 COX6C-210ENST00000524245 513 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
MT-ND1P03886 AP004607.5-201ENST00000532034 217 ntBASIC5.79□□□□□ -1.48
MT-ND1P03886 RPA2P3-201ENST00000533268 770 ntBASIC5.79□□□□□ -1.48
MT-ND1P03886 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC5.79□□□□□ -1.48
MT-ND1P03886 ATP5G2-205ENST00000549748 728 ntTSL 2 BASIC5.79□□□□□ -1.48
MT-ND1P03886 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC5.79□□□□□ -1.48
MT-ND1P03886 NPM1P42-201ENST00000560329 862 ntBASIC5.79□□□□□ -1.48
MT-ND1P03886 RN7SL32P-201ENST00000580514 281 ntBASIC5.79□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 124.8 ms