Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
SRRM4A7MD48 ZNF658B-201ENST00000602828 3408 ntBASIC5.11□□□□□ -1.59
SRRM4A7MD48 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
SRRM4A7MD48 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
SRRM4A7MD48 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC5.11□□□□□ -1.59
SRRM4A7MD48 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
SRRM4A7MD48 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
SRRM4A7MD48 AMZ2-206ENST00000577985 2257 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
SRRM4A7MD48 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
SRRM4A7MD48 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
SRRM4A7MD48 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
SRRM4A7MD48 FUNDC2P3-201ENST00000334716 533 ntBASIC5.11□□□□□ -1.59
SRRM4A7MD48 SNORD16-201ENST00000362803 99 ntBASIC5.11□□□□□ -1.59
SRRM4A7MD48 RNU1-84P-201ENST00000365447 164 ntBASIC5.11□□□□□ -1.59
SRRM4A7MD48 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC5.11□□□□□ -1.59
SRRM4A7MD48 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC5.11□□□□□ -1.59
SRRM4A7MD48 RN7SKP221-201ENST00000410420 301 ntBASIC5.11□□□□□ -1.59
SRRM4A7MD48 AL356968.2-201ENST00000412769 1257 ntBASIC5.11□□□□□ -1.59
SRRM4A7MD48 SMARCE1P1-201ENST00000417747 1186 ntBASIC5.11□□□□□ -1.59
SRRM4A7MD48 AL139184.1-202ENST00000422303 222 ntBASIC5.11□□□□□ -1.59
SRRM4A7MD48 LHFPL3-AS1-204ENST00000433514 748 ntTSL 2 BASIC5.11□□□□□ -1.59
SRRM4A7MD48 AL138787.1-202ENST00000437804 898 ntBASIC5.11□□□□□ -1.59
SRRM4A7MD48 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC5.11□□□□□ -1.59
SRRM4A7MD48 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC5.11□□□□□ -1.59
SRRM4A7MD48 AL022237.1-201ENST00000446663 358 ntBASIC5.11□□□□□ -1.59
SRRM4A7MD48 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC5.11□□□□□ -1.59
SRRM4A7MD48 AC114752.1-201ENST00000448204 289 ntTSL 3 BASIC5.11□□□□□ -1.59
SRRM4A7MD48 AC103563.5-201ENST00000455643 364 ntBASIC5.11□□□□□ -1.59
SRRM4A7MD48 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC5.11□□□□□ -1.59
SRRM4A7MD48 AC005017.1-201ENST00000482002 490 ntBASIC5.11□□□□□ -1.59
SRRM4A7MD48 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC5.11□□□□□ -1.59
SRRM4A7MD48 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
SRRM4A7MD48 AC011396.2-201ENST00000515598 582 ntTSL 3 BASIC5.11□□□□□ -1.59
SRRM4A7MD48 AC099805.1-205ENST00000521794 837 ntTSL 2 BASIC5.11□□□□□ -1.59
SRRM4A7MD48 AP000755.1-201ENST00000527100 507 ntTSL 3 BASIC5.11□□□□□ -1.59
SRRM4A7MD48 AC084851.2-201ENST00000530377 364 ntBASIC5.11□□□□□ -1.59
SRRM4A7MD48 AP002833.2-201ENST00000531585 462 ntTSL 3 BASIC5.11□□□□□ -1.59
SRRM4A7MD48 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC5.11□□□□□ -1.59
SRRM4A7MD48 AC100768.2-201ENST00000534068 683 ntTSL 3 BASIC5.11□□□□□ -1.59
SRRM4A7MD48 AC090115.2-201ENST00000548060 883 ntBASIC5.11□□□□□ -1.59
SRRM4A7MD48 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
SRRM4A7MD48 AC067805.1-201ENST00000559344 470 ntBASIC5.11□□□□□ -1.59
SRRM4A7MD48 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC5.11□□□□□ -1.59
SRRM4A7MD48 AC009120.3-201ENST00000563335 499 ntBASIC5.11□□□□□ -1.59
SRRM4A7MD48 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
SRRM4A7MD48 SYPL1P2-201ENST00000582878 727 ntBASIC5.11□□□□□ -1.59
SRRM4A7MD48 NPM1P45-201ENST00000583151 559 ntBASIC5.11□□□□□ -1.59
SRRM4A7MD48 METTL23-207ENST00000588783 1184 ntTSL 5 BASIC5.11□□□□□ -1.59
SRRM4A7MD48 AL353729.2-201ENST00000605859 1249 ntBASIC5.11□□□□□ -1.59
SRRM4A7MD48 LINC01320-206ENST00000607437 528 ntTSL 5 BASIC5.11□□□□□ -1.59
SRRM4A7MD48 RNU6-84P-201ENST00000607737 102 ntBASIC5.11□□□□□ -1.59
SRRM4A7MD48 AC012467.1-201ENST00000607740 256 ntBASIC5.11□□□□□ -1.59
SRRM4A7MD48 BMS1P14-201ENST00000615056 606 ntTSL 5 BASIC5.11□□□□□ -1.59
SRRM4A7MD48 AC241377.1-201ENST00000619797 406 ntBASIC5.11□□□□□ -1.59
SRRM4A7MD48 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
SRRM4A7MD48 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
SRRM4A7MD48 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
SRRM4A7MD48 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
SRRM4A7MD48 LZIC-203ENST00000400903 1405 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
SRRM4A7MD48 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC5.11□□□□□ -1.59
SRRM4A7MD48 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
SRRM4A7MD48 CASC19-238ENST00000641523 1558 ntBASIC5.11□□□□□ -1.59
SRRM4A7MD48 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
SRRM4A7MD48 AF121898.1-201ENST00000440763 1860 ntTSL 5 BASIC5.11□□□□□ -1.59
SRRM4A7MD48 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC5.11□□□□□ -1.59
SRRM4A7MD48 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC5.11□□□□□ -1.59
SRRM4A7MD48 AOX3P-204ENST00000491025 2107 ntBASIC5.11□□□□□ -1.59
SRRM4A7MD48 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
SRRM4A7MD48 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
SRRM4A7MD48 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
SRRM4A7MD48 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
SRRM4A7MD48 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
SRRM4A7MD48 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
SRRM4A7MD48 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
SRRM4A7MD48 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
SRRM4A7MD48 RN7SKP257-201ENST00000364525 309 ntBASIC5.1□□□□□ -1.59
SRRM4A7MD48 CENPN-203ENST00000393335 1556 ntTSL 2 BASIC5.1□□□□□ -1.59
SRRM4A7MD48 CAV1-204ENST00000393470 598 ntTSL 4 BASIC5.1□□□□□ -1.59
SRRM4A7MD48 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
SRRM4A7MD48 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC5.1□□□□□ -1.59
SRRM4A7MD48 AL359976.1-201ENST00000418655 3528 ntBASIC5.1□□□□□ -1.59
SRRM4A7MD48 RPS17P17-201ENST00000419392 409 ntBASIC5.1□□□□□ -1.59
SRRM4A7MD48 AKAP17BP-201ENST00000431706 2719 ntBASIC5.1□□□□□ -1.59
SRRM4A7MD48 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC5.1□□□□□ -1.59
SRRM4A7MD48 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC5.1□□□□□ -1.59
SRRM4A7MD48 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC5.1□□□□□ -1.59
SRRM4A7MD48 GAPDHP37-201ENST00000442317 968 ntBASIC5.1□□□□□ -1.59
SRRM4A7MD48 OR13K1P-201ENST00000444577 975 ntBASIC5.1□□□□□ -1.59
SRRM4A7MD48 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC5.1□□□□□ -1.59
SRRM4A7MD48 CRYZL1-217ENST00000445393 824 ntTSL 5 BASIC5.1□□□□□ -1.59
SRRM4A7MD48 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC5.1□□□□□ -1.59
SRRM4A7MD48 RPL31P11-202ENST00000454082 372 ntBASIC5.1□□□□□ -1.59
SRRM4A7MD48 RN7SL221P-201ENST00000466190 281 ntBASIC5.1□□□□□ -1.59
SRRM4A7MD48 RN7SL267P-201ENST00000485107 261 ntBASIC5.1□□□□□ -1.59
SRRM4A7MD48 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC5.1□□□□□ -1.59
SRRM4A7MD48 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
SRRM4A7MD48 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC5.1□□□□□ -1.59
SRRM4A7MD48 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC5.1□□□□□ -1.59
SRRM4A7MD48 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC5.1□□□□□ -1.59
SRRM4A7MD48 BMPR1APS2-201ENST00000527904 1012 ntBASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 86.4 ms