Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC7.36□□□□□ -1.23
VTA1Q9NP79 EIF2S2P4-201ENST00000461070 984 ntBASIC7.36□□□□□ -1.23
VTA1Q9NP79 CBX1-205ENST00000495350 550 ntTSL 2 BASIC7.36□□□□□ -1.23
VTA1Q9NP79 LINC02059-201ENST00000503843 452 ntTSL 3 BASIC7.36□□□□□ -1.23
VTA1Q9NP79 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC7.36□□□□□ -1.23
VTA1Q9NP79 SEC11B-201ENST00000518383 499 ntBASIC7.36□□□□□ -1.23
VTA1Q9NP79 MTND1P6-201ENST00000523621 946 ntBASIC7.36□□□□□ -1.23
VTA1Q9NP79 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC7.36□□□□□ -1.23
VTA1Q9NP79 AC020891.2-201ENST00000559672 776 ntTSL 2 BASIC7.36□□□□□ -1.23
VTA1Q9NP79 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC7.36□□□□□ -1.23
VTA1Q9NP79 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC7.36□□□□□ -1.23
VTA1Q9NP79 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC7.36□□□□□ -1.23
VTA1Q9NP79 AC107993.1-201ENST00000591343 684 ntBASIC7.36□□□□□ -1.23
VTA1Q9NP79 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC7.36□□□□□ -1.23
VTA1Q9NP79 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC7.36□□□□□ -1.23
VTA1Q9NP79 AL078623.1-201ENST00000602702 907 ntBASIC7.36□□□□□ -1.23
VTA1Q9NP79 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC7.36□□□□□ -1.23
VTA1Q9NP79 AL354718.1-201ENST00000619764 589 ntBASIC7.36□□□□□ -1.23
VTA1Q9NP79 Metazoa_SRP.106-201ENST00000622471 296 ntBASIC7.36□□□□□ -1.23
VTA1Q9NP79 POGZ-204ENST00000392723 6152 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
VTA1Q9NP79 SORBS1-219ENST00000607232 4374 ntAPPRIS ALT2 TSL 5 BASIC7.36□□□□□ -1.23
VTA1Q9NP79 SRGAP3-213ENST00000618999 3929 ntTSL 5 BASIC7.36□□□□□ -1.23
VTA1Q9NP79 PPP2R3A-202ENST00000334546 2196 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
VTA1Q9NP79 LRRIQ3-201ENST00000354431 2849 ntAPPRIS P2 TSL 5 BASIC7.36□□□□□ -1.23
VTA1Q9NP79 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
VTA1Q9NP79 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC7.36□□□□□ -1.23
VTA1Q9NP79 AC104966.1-201ENST00000467010 1464 ntBASIC7.36□□□□□ -1.23
VTA1Q9NP79 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC7.36□□□□□ -1.23
VTA1Q9NP79 BRWD1-203ENST00000342449 12929 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
VTA1Q9NP79 NOX1-202ENST00000372960 2418 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
VTA1Q9NP79 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
VTA1Q9NP79 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC7.35□□□□□ -1.23
VTA1Q9NP79 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
VTA1Q9NP79 CTPS1-201ENST00000372616 2037 ntAPPRIS P1 TSL 2 BASIC7.35□□□□□ -1.23
VTA1Q9NP79 OR3A3-203ENST00000641141 3800 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
VTA1Q9NP79 RAD17P2-201ENST00000451754 1977 ntBASIC7.35□□□□□ -1.23
VTA1Q9NP79 ZNF3-203ENST00000303915 3473 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
VTA1Q9NP79 NBPF9-206ENST00000613969 4624 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
VTA1Q9NP79 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
VTA1Q9NP79 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC7.35□□□□□ -1.23
VTA1Q9NP79 NCOA4P3-201ENST00000513203 1877 ntBASIC7.35□□□□□ -1.23
VTA1Q9NP79 WDR93-204ENST00000558000 1886 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.23
VTA1Q9NP79 OXCT1-206ENST00000512084 1593 ntTSL 2 BASIC7.35□□□□□ -1.23
VTA1Q9NP79 RNU6-697P-201ENST00000363348 107 ntBASIC7.35□□□□□ -1.23
VTA1Q9NP79 SNORD51.1-201ENST00000365405 77 ntBASIC7.35□□□□□ -1.23
VTA1Q9NP79 RFPL3S-201ENST00000382084 1117 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
VTA1Q9NP79 AL589994.1-201ENST00000404962 340 ntBASIC7.35□□□□□ -1.23
VTA1Q9NP79 UQCRFS1P3-201ENST00000407697 385 ntBASIC7.35□□□□□ -1.23
VTA1Q9NP79 AC096537.2-201ENST00000413707 714 ntBASIC7.35□□□□□ -1.23
VTA1Q9NP79 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC7.35□□□□□ -1.23
VTA1Q9NP79 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC7.35□□□□□ -1.23
VTA1Q9NP79 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC7.35□□□□□ -1.23
VTA1Q9NP79 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC7.35□□□□□ -1.23
VTA1Q9NP79 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
VTA1Q9NP79 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
VTA1Q9NP79 MORF4L1P5-201ENST00000433352 961 ntBASIC7.35□□□□□ -1.23
VTA1Q9NP79 RBMY3AP-201ENST00000449381 1145 ntBASIC7.35□□□□□ -1.23
VTA1Q9NP79 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC7.35□□□□□ -1.23
VTA1Q9NP79 LINC01789-202ENST00000455614 491 ntTSL 3 BASIC7.35□□□□□ -1.23
VTA1Q9NP79 AL049650.1-201ENST00000461548 823 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
VTA1Q9NP79 NDUFA5P5-201ENST00000468361 342 ntBASIC7.35□□□□□ -1.23
VTA1Q9NP79 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC7.35□□□□□ -1.23
VTA1Q9NP79 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC7.35□□□□□ -1.23
VTA1Q9NP79 SUMO2P19-201ENST00000518920 295 ntBASIC7.35□□□□□ -1.23
VTA1Q9NP79 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC7.35□□□□□ -1.23
VTA1Q9NP79 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC7.35□□□□□ -1.23
VTA1Q9NP79 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC7.35□□□□□ -1.23
VTA1Q9NP79 BNIP3P40-201ENST00000596017 556 ntBASIC7.35□□□□□ -1.23
VTA1Q9NP79 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC7.35□□□□□ -1.23
VTA1Q9NP79 AL445649.1-201ENST00000615941 691 ntBASIC7.35□□□□□ -1.23
VTA1Q9NP79 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC7.35□□□□□ -1.23
VTA1Q9NP79 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
VTA1Q9NP79 AC022960.3-201ENST00000619794 441 ntBASIC7.35□□□□□ -1.23
VTA1Q9NP79 AC022400.9-201ENST00000623633 273 ntBASIC7.35□□□□□ -1.23
VTA1Q9NP79 ATP5S-202ENST00000311459 10212 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
VTA1Q9NP79 SEPT14-201ENST00000388975 3785 ntAPPRIS P1 TSL 2 BASIC7.35□□□□□ -1.23
VTA1Q9NP79 LINC01441-201ENST00000433766 2290 ntTSL 2 BASIC7.35□□□□□ -1.23
VTA1Q9NP79 CNOT1-216ENST00000569240 7660 ntAPPRIS ALT1 TSL 1 (best) BASIC7.35□□□□□ -1.23
VTA1Q9NP79 NBPF26-206ENST00000617913 2931 ntTSL 5 BASIC7.34□□□□□ -1.23
VTA1Q9NP79 DUXAP8-203ENST00000437781 2398 ntTSL 2 BASIC7.34□□□□□ -1.23
VTA1Q9NP79 AC126323.2-201ENST00000559985 2369 ntTSL 5 BASIC7.34□□□□□ -1.23
VTA1Q9NP79 ALB-220ENST00000621628 1606 ntTSL 5 BASIC7.34□□□□□ -1.23
VTA1Q9NP79 NIN-204ENST00000382043 4216 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
VTA1Q9NP79 CACNB4-225ENST00000636442 4232 ntTSL 5 BASIC7.34□□□□□ -1.23
VTA1Q9NP79 CORIN-211ENST00000610355 4696 ntTSL 5 BASIC7.34□□□□□ -1.23
VTA1Q9NP79 RRN3-202ENST00000327307 2039 ntTSL 2 BASIC7.34□□□□□ -1.23
VTA1Q9NP79 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC7.34□□□□□ -1.23
VTA1Q9NP79 NAA15-208ENST00000515576 2456 ntTSL 2 BASIC7.34□□□□□ -1.23
VTA1Q9NP79 CD96-201ENST00000283285 4324 ntAPPRIS P4 TSL 1 (best) BASIC7.34□□□□□ -1.23
VTA1Q9NP79 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC7.34□□□□□ -1.23
VTA1Q9NP79 SNORA72.3-201ENST00000365074 132 ntBASIC7.34□□□□□ -1.23
VTA1Q9NP79 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC7.34□□□□□ -1.23
VTA1Q9NP79 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC7.34□□□□□ -1.23
VTA1Q9NP79 RPL23AP85-201ENST00000421838 433 ntBASIC7.34□□□□□ -1.23
VTA1Q9NP79 AC115283.1-201ENST00000427353 400 ntBASIC7.34□□□□□ -1.23
VTA1Q9NP79 AL389925.1-201ENST00000432257 728 ntBASIC7.34□□□□□ -1.23
VTA1Q9NP79 CFAP58-AS1-201ENST00000435434 795 ntTSL 2 BASIC7.34□□□□□ -1.23
VTA1Q9NP79 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC7.34□□□□□ -1.23
VTA1Q9NP79 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC7.34□□□□□ -1.23
VTA1Q9NP79 RNF2P1-201ENST00000442955 1010 ntBASIC7.34□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 133.8 ms