Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 AC117490.2-201ENST00000610042 594 ntBASIC6.11□□□□□ -1.43
VPS33AQ96AX1 IGKV2OR2-10-201ENST00000613976 311 ntBASIC6.11□□□□□ -1.43
VPS33AQ96AX1 U1.25-201ENST00000614085 162 ntBASIC6.11□□□□□ -1.43
VPS33AQ96AX1 U1.31-201ENST00000620022 160 ntBASIC6.11□□□□□ -1.43
VPS33AQ96AX1 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC6.11□□□□□ -1.43
VPS33AQ96AX1 DLST-216ENST00000626051 252 ntTSL 5 BASIC6.11□□□□□ -1.43
VPS33AQ96AX1 TTN-AS1-268ENST00000629094 604 ntTSL 5 BASIC6.11□□□□□ -1.43
VPS33AQ96AX1 AL049541.1-201ENST00000630976 642 ntTSL 2 BASIC6.11□□□□□ -1.43
VPS33AQ96AX1 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC6.11□□□□□ -1.43
VPS33AQ96AX1 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
VPS33AQ96AX1 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC6.11□□□□□ -1.43
VPS33AQ96AX1 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
VPS33AQ96AX1 AL391704.1-201ENST00000422206 2368 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
VPS33AQ96AX1 CIR1-201ENST00000342016 1921 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
VPS33AQ96AX1 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
VPS33AQ96AX1 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
VPS33AQ96AX1 AC015799.1-201ENST00000622996 3122 ntBASIC6.1□□□□□ -1.43
VPS33AQ96AX1 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
VPS33AQ96AX1 MTCO1P8-201ENST00000416914 1523 ntBASIC6.1□□□□□ -1.43
VPS33AQ96AX1 MTCO1P28-201ENST00000574177 1528 ntBASIC6.1□□□□□ -1.43
VPS33AQ96AX1 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
VPS33AQ96AX1 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC6.1□□□□□ -1.43
VPS33AQ96AX1 AC003973.2-201ENST00000596778 1394 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
VPS33AQ96AX1 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
VPS33AQ96AX1 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC6.1□□□□□ -1.43
VPS33AQ96AX1 PPIAP24-201ENST00000328558 471 ntBASIC6.1□□□□□ -1.43
VPS33AQ96AX1 RNA5SP355-201ENST00000365317 135 ntBASIC6.1□□□□□ -1.43
VPS33AQ96AX1 CDY17P-201ENST00000414121 1282 ntBASIC6.1□□□□□ -1.43
VPS33AQ96AX1 AC007349.3-201ENST00000415356 872 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
VPS33AQ96AX1 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC6.1□□□□□ -1.43
VPS33AQ96AX1 AC007562.1-201ENST00000421819 517 ntBASIC6.1□□□□□ -1.43
VPS33AQ96AX1 AL358394.1-201ENST00000422807 535 ntTSL 2 BASIC6.1□□□□□ -1.43
VPS33AQ96AX1 TBX18-AS1-201ENST00000423086 421 ntTSL 3 BASIC6.1□□□□□ -1.43
VPS33AQ96AX1 CDY8P-201ENST00000428380 1279 ntBASIC6.1□□□□□ -1.43
VPS33AQ96AX1 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC6.1□□□□□ -1.43
VPS33AQ96AX1 ATP6V1G1P4-201ENST00000438388 335 ntBASIC6.1□□□□□ -1.43
VPS33AQ96AX1 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC6.1□□□□□ -1.43
VPS33AQ96AX1 AC023274.2-201ENST00000445264 521 ntBASIC6.1□□□□□ -1.43
VPS33AQ96AX1 CDY20P-201ENST00000447528 1279 ntBASIC6.1□□□□□ -1.43
VPS33AQ96AX1 AL022319.1-201ENST00000458183 1167 ntBASIC6.1□□□□□ -1.43
VPS33AQ96AX1 GPX6-202ENST00000474923 716 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
VPS33AQ96AX1 RPS10P28-201ENST00000480396 498 ntBASIC6.1□□□□□ -1.43
VPS33AQ96AX1 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC6.1□□□□□ -1.43
VPS33AQ96AX1 AC093878.1-201ENST00000515630 432 ntBASIC6.1□□□□□ -1.43
VPS33AQ96AX1 GNG2-203ENST00000553432 577 ntTSL 4 BASIC6.1□□□□□ -1.43
VPS33AQ96AX1 AL157871.4-201ENST00000557226 385 ntTSL 2 BASIC6.1□□□□□ -1.43
VPS33AQ96AX1 RN7SL131P-201ENST00000579043 256 ntBASIC6.1□□□□□ -1.43
VPS33AQ96AX1 AC005208.1-202ENST00000587325 725 ntTSL 3 BASIC6.1□□□□□ -1.43
VPS33AQ96AX1 AC006305.3-201ENST00000590589 454 ntTSL 2 BASIC6.1□□□□□ -1.43
VPS33AQ96AX1 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC6.1□□□□□ -1.43
VPS33AQ96AX1 OR7M1P-201ENST00000608946 533 ntBASIC6.1□□□□□ -1.43
VPS33AQ96AX1 AC127071.2-201ENST00000623293 527 ntBASIC6.1□□□□□ -1.43
VPS33AQ96AX1 Z83818.2-201ENST00000635331 433 ntTSL 3 BASIC6.1□□□□□ -1.43
VPS33AQ96AX1 LINC02341-202ENST00000637462 1295 ntTSL 5 BASIC6.1□□□□□ -1.43
VPS33AQ96AX1 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
VPS33AQ96AX1 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
VPS33AQ96AX1 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
VPS33AQ96AX1 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC6.1□□□□□ -1.43
VPS33AQ96AX1 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC6.1□□□□□ -1.43
VPS33AQ96AX1 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC6.1□□□□□ -1.43
VPS33AQ96AX1 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC6.1□□□□□ -1.43
VPS33AQ96AX1 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC6.1□□□□□ -1.43
VPS33AQ96AX1 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC6.09□□□□□ -1.43
VPS33AQ96AX1 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC6.09□□□□□ -1.43
VPS33AQ96AX1 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC6.09□□□□□ -1.43
VPS33AQ96AX1 GTF2H3-201ENST00000228955 1472 ntTSL 2 BASIC6.09□□□□□ -1.43
VPS33AQ96AX1 CALB1-208ENST00000518457 1490 ntTSL 2 BASIC6.09□□□□□ -1.43
VPS33AQ96AX1 ELOC-205ENST00000520210 1451 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
VPS33AQ96AX1 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
VPS33AQ96AX1 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC6.09□□□□□ -1.43
VPS33AQ96AX1 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
VPS33AQ96AX1 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC6.09□□□□□ -1.43
VPS33AQ96AX1 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
VPS33AQ96AX1 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
VPS33AQ96AX1 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC6.09□□□□□ -1.43
VPS33AQ96AX1 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
VPS33AQ96AX1 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
VPS33AQ96AX1 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC6.09□□□□□ -1.43
VPS33AQ96AX1 OR4F17-201ENST00000318050 1054 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
VPS33AQ96AX1 OR4F4-201ENST00000326183 1054 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
VPS33AQ96AX1 OR4F5-201ENST00000335137 1054 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
VPS33AQ96AX1 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC6.09□□□□□ -1.43
VPS33AQ96AX1 RAB9AP4-201ENST00000415230 609 ntBASIC6.09□□□□□ -1.43
VPS33AQ96AX1 AC007879.3-201ENST00000417096 556 ntTSL 4 BASIC6.09□□□□□ -1.43
VPS33AQ96AX1 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC6.09□□□□□ -1.43
VPS33AQ96AX1 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC6.09□□□□□ -1.43
VPS33AQ96AX1 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC6.09□□□□□ -1.43
VPS33AQ96AX1 BX679664.2-201ENST00000439282 283 ntBASIC6.09□□□□□ -1.43
VPS33AQ96AX1 OR52U1P-201ENST00000439752 923 ntBASIC6.09□□□□□ -1.43
VPS33AQ96AX1 AC239800.1-201ENST00000442049 719 ntBASIC6.09□□□□□ -1.43
VPS33AQ96AX1 AC079922.1-201ENST00000443291 359 ntBASIC6.09□□□□□ -1.43
VPS33AQ96AX1 AC019186.1-201ENST00000447019 545 ntTSL 3 BASIC6.09□□□□□ -1.43
VPS33AQ96AX1 DIRC3-AS1-201ENST00000452813 557 ntTSL 3 BASIC6.09□□□□□ -1.43
VPS33AQ96AX1 RPS27AP3-201ENST00000453803 454 ntBASIC6.09□□□□□ -1.43
VPS33AQ96AX1 AC006026.3-201ENST00000454029 143 ntTSL 3 BASIC6.09□□□□□ -1.43
VPS33AQ96AX1 RNU6-775P-201ENST00000459318 96 ntBASIC6.09□□□□□ -1.43
VPS33AQ96AX1 ZNF525-204ENST00000491101 569 ntTSL 4 BASIC6.09□□□□□ -1.43
VPS33AQ96AX1 HMGB3P14-201ENST00000494195 599 ntBASIC6.09□□□□□ -1.43
VPS33AQ96AX1 AC131392.1-201ENST00000506490 633 ntBASIC6.09□□□□□ -1.43
VPS33AQ96AX1 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms