Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
CCDC50Q8IVM0 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC6.6□□□□□ -1.35
CCDC50Q8IVM0 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
CCDC50Q8IVM0 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC6.6□□□□□ -1.35
CCDC50Q8IVM0 AC022306.1-201ENST00000560489 1562 ntBASIC6.6□□□□□ -1.35
CCDC50Q8IVM0 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
CCDC50Q8IVM0 RALGAPA1P1-201ENST00000443361 6232 ntBASIC6.6□□□□□ -1.35
CCDC50Q8IVM0 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC6.6□□□□□ -1.35
CCDC50Q8IVM0 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC6.59□□□□□ -1.35
CCDC50Q8IVM0 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC6.59□□□□□ -1.35
CCDC50Q8IVM0 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
CCDC50Q8IVM0 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC6.59□□□□□ -1.35
CCDC50Q8IVM0 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC6.59□□□□□ -1.35
CCDC50Q8IVM0 CASC19-260ENST00000641828 2001 ntBASIC6.59□□□□□ -1.35
CCDC50Q8IVM0 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC6.59□□□□□ -1.35
CCDC50Q8IVM0 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
CCDC50Q8IVM0 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC6.59□□□□□ -1.35
CCDC50Q8IVM0 XAGE3-201ENST00000346279 497 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
CCDC50Q8IVM0 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC6.59□□□□□ -1.35
CCDC50Q8IVM0 AP003385.1-201ENST00000426387 893 ntBASIC6.59□□□□□ -1.35
CCDC50Q8IVM0 AC083862.1-201ENST00000427378 1242 ntBASIC6.59□□□□□ -1.35
CCDC50Q8IVM0 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
CCDC50Q8IVM0 COL11A2P1-205ENST00000441798 676 ntBASIC6.59□□□□□ -1.35
CCDC50Q8IVM0 Z83838.1-202ENST00000456225 839 ntBASIC6.59□□□□□ -1.35
CCDC50Q8IVM0 TFP1-201ENST00000460564 572 ntTSL 4 BASIC6.59□□□□□ -1.35
CCDC50Q8IVM0 RN7SL714P-201ENST00000487050 298 ntBASIC6.59□□□□□ -1.35
CCDC50Q8IVM0 TFP1-203ENST00000490470 561 ntTSL 4 BASIC6.59□□□□□ -1.35
CCDC50Q8IVM0 AC122714.1-201ENST00000502510 459 ntBASIC6.59□□□□□ -1.35
CCDC50Q8IVM0 NREP-217ENST00000509025 987 ntTSL 3 BASIC6.59□□□□□ -1.35
CCDC50Q8IVM0 MINOS1P4-201ENST00000515470 318 ntBASIC6.59□□□□□ -1.35
CCDC50Q8IVM0 NREP-223ENST00000515855 801 ntTSL 4 BASIC6.59□□□□□ -1.35
CCDC50Q8IVM0 RN7SKP64-201ENST00000517206 328 ntBASIC6.59□□□□□ -1.35
CCDC50Q8IVM0 AP000755.1-201ENST00000527100 507 ntTSL 3 BASIC6.59□□□□□ -1.35
CCDC50Q8IVM0 OR4A40P-201ENST00000533878 948 ntBASIC6.59□□□□□ -1.35
CCDC50Q8IVM0 PATE4-203ENST00000534411 897 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
CCDC50Q8IVM0 AC090709.1-201ENST00000548384 716 ntTSL 3 BASIC6.59□□□□□ -1.35
CCDC50Q8IVM0 LINC01855-201ENST00000585520 396 ntTSL 3 BASIC6.59□□□□□ -1.35
CCDC50Q8IVM0 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC6.59□□□□□ -1.35
CCDC50Q8IVM0 AC125494.2-201ENST00000602431 657 ntBASIC6.59□□□□□ -1.35
CCDC50Q8IVM0 AL008582.1-201ENST00000609612 442 ntBASIC6.59□□□□□ -1.35
CCDC50Q8IVM0 AC116667.2-201ENST00000641075 823 ntBASIC6.59□□□□□ -1.35
CCDC50Q8IVM0 AC020656.2-201ENST00000613291 5309 ntBASIC6.59□□□□□ -1.35
CCDC50Q8IVM0 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
CCDC50Q8IVM0 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
CCDC50Q8IVM0 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
CCDC50Q8IVM0 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC6.59□□□□□ -1.35
CCDC50Q8IVM0 CASC15-201ENST00000444265 1497 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
CCDC50Q8IVM0 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC6.59□□□□□ -1.36
CCDC50Q8IVM0 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
CCDC50Q8IVM0 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC6.59□□□□□ -1.36
CCDC50Q8IVM0 CAP1P2-201ENST00000417455 1409 ntBASIC6.59□□□□□ -1.36
CCDC50Q8IVM0 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC6.59□□□□□ -1.36
CCDC50Q8IVM0 CABYR-207ENST00000486759 1664 ntAPPRIS P4 TSL 5 BASIC6.58□□□□□ -1.36
CCDC50Q8IVM0 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
CCDC50Q8IVM0 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
CCDC50Q8IVM0 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
CCDC50Q8IVM0 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
CCDC50Q8IVM0 SEC61G-201ENST00000352861 462 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
CCDC50Q8IVM0 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
CCDC50Q8IVM0 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC6.58□□□□□ -1.36
CCDC50Q8IVM0 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC6.58□□□□□ -1.36
CCDC50Q8IVM0 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC6.58□□□□□ -1.36
CCDC50Q8IVM0 HCG14-201ENST00000444986 413 ntTSL 2 BASIC6.58□□□□□ -1.36
CCDC50Q8IVM0 AL031963.1-201ENST00000447644 695 ntTSL 3 BASIC6.58□□□□□ -1.36
CCDC50Q8IVM0 AL133319.1-201ENST00000447848 777 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
CCDC50Q8IVM0 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC6.58□□□□□ -1.36
CCDC50Q8IVM0 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC6.58□□□□□ -1.36
CCDC50Q8IVM0 RN7SL413P-201ENST00000482700 297 ntBASIC6.58□□□□□ -1.36
CCDC50Q8IVM0 ATP6V0E1-202ENST00000517669 502 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
CCDC50Q8IVM0 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC6.58□□□□□ -1.36
CCDC50Q8IVM0 FBXO16-207ENST00000518734 995 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
CCDC50Q8IVM0 AZIN1-AS1-211ENST00000520455 480 ntTSL 3 BASIC6.58□□□□□ -1.36
CCDC50Q8IVM0 AC099805.1-205ENST00000521794 837 ntTSL 2 BASIC6.58□□□□□ -1.36
CCDC50Q8IVM0 AC245519.1-201ENST00000522799 512 ntTSL 4 BASIC6.58□□□□□ -1.36
CCDC50Q8IVM0 OR9G2P-201ENST00000533326 880 ntBASIC6.58□□□□□ -1.36
CCDC50Q8IVM0 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC6.58□□□□□ -1.36
CCDC50Q8IVM0 AC023906.3-201ENST00000559825 874 ntTSL 5 BASIC6.58□□□□□ -1.36
CCDC50Q8IVM0 TTC39C-204ENST00000577185 533 ntTSL 3 BASIC6.58□□□□□ -1.36
CCDC50Q8IVM0 AC006924.1-201ENST00000610750 559 ntBASIC6.58□□□□□ -1.36
CCDC50Q8IVM0 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC6.58□□□□□ -1.36
CCDC50Q8IVM0 MIR7159-201ENST00000620587 66 ntBASIC6.58□□□□□ -1.36
CCDC50Q8IVM0 AL049767.1-201ENST00000636811 514 ntTSL 5 BASIC6.58□□□□□ -1.36
CCDC50Q8IVM0 AC000095.2-202ENST00000637415 154 ntBASIC6.58□□□□□ -1.36
CCDC50Q8IVM0 AP001541.1-201ENST00000623322 1904 ntBASIC6.58□□□□□ -1.36
CCDC50Q8IVM0 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
CCDC50Q8IVM0 AADAC-201ENST00000232892 1642 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
CCDC50Q8IVM0 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC6.57□□□□□ -1.36
CCDC50Q8IVM0 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
CCDC50Q8IVM0 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
CCDC50Q8IVM0 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
CCDC50Q8IVM0 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
CCDC50Q8IVM0 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
CCDC50Q8IVM0 AL442071.1-201ENST00000289890 558 ntTSL 3 BASIC6.57□□□□□ -1.36
CCDC50Q8IVM0 RN7SKP257-201ENST00000364525 309 ntBASIC6.57□□□□□ -1.36
CCDC50Q8IVM0 AL445238.1-204ENST00000400311 463 ntBASIC6.57□□□□□ -1.36
CCDC50Q8IVM0 AL121835.1-201ENST00000404250 354 ntBASIC6.57□□□□□ -1.36
CCDC50Q8IVM0 AC007562.1-201ENST00000421819 517 ntBASIC6.57□□□□□ -1.36
CCDC50Q8IVM0 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC6.57□□□□□ -1.36
CCDC50Q8IVM0 VTI1BP4-201ENST00000427516 527 ntBASIC6.57□□□□□ -1.36
CCDC50Q8IVM0 AC023274.2-201ENST00000445264 521 ntBASIC6.57□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 114.8 ms