Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 AL121830.1-206ENST00000608476 1254 ntTSL 5 BASIC7.79□□□□□ -1.16
NPAS4Q8IUM7 AC009237.15-201ENST00000610252 501 ntBASIC7.79□□□□□ -1.16
NPAS4Q8IUM7 VN1R74P-201ENST00000613259 503 ntBASIC7.79□□□□□ -1.16
NPAS4Q8IUM7 AC011939.3-201ENST00000613686 466 ntBASIC7.79□□□□□ -1.16
NPAS4Q8IUM7 AL139407.1-201ENST00000613826 1175 ntBASIC7.79□□□□□ -1.16
NPAS4Q8IUM7 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC7.79□□□□□ -1.16
NPAS4Q8IUM7 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC7.79□□□□□ -1.16
NPAS4Q8IUM7 ZNF663P-202ENST00000641770 1131 ntBASIC7.79□□□□□ -1.16
NPAS4Q8IUM7 STOM-201ENST00000286713 3010 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
NPAS4Q8IUM7 ATP2B4-201ENST00000341360 4658 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
NPAS4Q8IUM7 ZSCAN5A-201ENST00000391713 3562 ntAPPRIS P3 TSL 1 (best) BASIC7.79□□□□□ -1.16
NPAS4Q8IUM7 OPALIN-206ENST00000611913 3115 ntTSL 5 BASIC7.79□□□□□ -1.16
NPAS4Q8IUM7 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
NPAS4Q8IUM7 CD46-208ENST00000367042 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC7.79□□□□□ -1.16
NPAS4Q8IUM7 KIFAP3-203ENST00000367767 2718 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
NPAS4Q8IUM7 GDNF-202ENST00000344622 3655 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
NPAS4Q8IUM7 LIMD1-201ENST00000273317 11331 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
NPAS4Q8IUM7 TYW1B-203ENST00000620995 3113 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
NPAS4Q8IUM7 SLC26A5-206ENST00000393727 2270 ntAPPRIS ALT1 TSL 1 (best) BASIC7.78□□□□□ -1.16
NPAS4Q8IUM7 AC061975.5-201ENST00000584928 1441 ntBASIC7.78□□□□□ -1.16
NPAS4Q8IUM7 GABRQ-201ENST00000598523 6172 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
NPAS4Q8IUM7 LINC01537-201ENST00000450804 2450 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
NPAS4Q8IUM7 AC145207.5-201ENST00000582866 2682 ntBASIC7.78□□□□□ -1.16
NPAS4Q8IUM7 SLC6A16-202ENST00000454748 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC7.78□□□□□ -1.16
NPAS4Q8IUM7 HNRNPU-223ENST00000640001 4227 ntTSL 5 BASIC7.78□□□□□ -1.16
NPAS4Q8IUM7 IL31RA-207ENST00000490985 2414 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
NPAS4Q8IUM7 AC006213.6-201ENST00000623722 4179 ntBASIC7.78□□□□□ -1.16
NPAS4Q8IUM7 RAB2B-201ENST00000397762 2928 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
NPAS4Q8IUM7 RNA5SP472-201ENST00000363868 119 ntBASIC7.78□□□□□ -1.16
NPAS4Q8IUM7 AC092634.1-201ENST00000366505 199 ntBASIC7.78□□□□□ -1.16
NPAS4Q8IUM7 RNU6-413P-201ENST00000384115 107 ntBASIC7.78□□□□□ -1.16
NPAS4Q8IUM7 HNRNPH1P2-201ENST00000396845 1210 ntBASIC7.78□□□□□ -1.16
NPAS4Q8IUM7 MIR1266-201ENST00000408125 84 ntBASIC7.78□□□□□ -1.16
NPAS4Q8IUM7 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC7.78□□□□□ -1.16
NPAS4Q8IUM7 AL713923.1-201ENST00000414071 378 ntTSL 5 BASIC7.78□□□□□ -1.16
NPAS4Q8IUM7 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC7.78□□□□□ -1.16
NPAS4Q8IUM7 RPF2P1-201ENST00000424137 906 ntBASIC7.78□□□□□ -1.16
NPAS4Q8IUM7 AP003385.1-201ENST00000426387 893 ntBASIC7.78□□□□□ -1.16
NPAS4Q8IUM7 RPL12P49-201ENST00000441100 121 ntBASIC7.78□□□□□ -1.16
NPAS4Q8IUM7 AC006978.2-201ENST00000442800 666 ntAPPRIS P1 TSL 3 BASIC7.78□□□□□ -1.16
NPAS4Q8IUM7 AC010240.2-201ENST00000445363 1205 ntBASIC7.78□□□□□ -1.16
NPAS4Q8IUM7 AC104978.1-201ENST00000449387 391 ntBASIC7.78□□□□□ -1.16
NPAS4Q8IUM7 AL158835.1-204ENST00000449693 371 ntTSL 3 BASIC7.78□□□□□ -1.16
NPAS4Q8IUM7 HNRNPDLP3-201ENST00000456745 380 ntBASIC7.78□□□□□ -1.16
NPAS4Q8IUM7 AC016822.1-201ENST00000457975 439 ntTSL 3 BASIC7.78□□□□□ -1.16
NPAS4Q8IUM7 AC104825.1-201ENST00000503186 685 ntTSL 3 BASIC7.78□□□□□ -1.16
NPAS4Q8IUM7 HPRT1P2-201ENST00000505250 544 ntBASIC7.78□□□□□ -1.16
NPAS4Q8IUM7 TMEM97P2-201ENST00000517841 403 ntBASIC7.78□□□□□ -1.16
NPAS4Q8IUM7 OR5AK3P-201ENST00000527486 1297 ntBASIC7.78□□□□□ -1.16
NPAS4Q8IUM7 MTND2P26-201ENST00000528255 1029 ntBASIC7.78□□□□□ -1.16
NPAS4Q8IUM7 ASB8-207ENST00000536953 923 ntTSL 2 BASIC7.78□□□□□ -1.16
NPAS4Q8IUM7 PRB1-203ENST00000545626 710 ntAPPRIS ALT2 TSL 1 (best) BASIC7.78□□□□□ -1.16
NPAS4Q8IUM7 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC7.78□□□□□ -1.16
NPAS4Q8IUM7 AC027104.1-201ENST00000563702 681 ntBASIC7.78□□□□□ -1.16
NPAS4Q8IUM7 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC7.78□□□□□ -1.16
NPAS4Q8IUM7 AC022662.1-201ENST00000580252 331 ntBASIC7.78□□□□□ -1.16
NPAS4Q8IUM7 AC012593.1-208ENST00000587791 696 ntTSL 5 BASIC7.78□□□□□ -1.16
NPAS4Q8IUM7 MRPS35P3-201ENST00000603189 709 ntBASIC7.78□□□□□ -1.16
NPAS4Q8IUM7 AC010245.2-201ENST00000606908 1167 ntBASIC7.78□□□□□ -1.16
NPAS4Q8IUM7 AL360219.1-201ENST00000610230 366 ntBASIC7.78□□□□□ -1.16
NPAS4Q8IUM7 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
NPAS4Q8IUM7 AC211486.4-201ENST00000621495 113 ntBASIC7.78□□□□□ -1.16
NPAS4Q8IUM7 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC7.78□□□□□ -1.16
NPAS4Q8IUM7 MBD5-221ENST00000637159 902 ntTSL 5 BASIC7.78□□□□□ -1.16
NPAS4Q8IUM7 TMEM192-201ENST00000306480 10012 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
NPAS4Q8IUM7 DOCK8-204ENST00000432829 7452 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
NPAS4Q8IUM7 LRRC31-201ENST00000264676 2355 ntAPPRIS ALT2 TSL 2 BASIC7.78□□□□□ -1.16
NPAS4Q8IUM7 SLC10A7-201ENST00000335472 2798 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
NPAS4Q8IUM7 ZNF407-207ENST00000582337 5662 ntTSL 5 BASIC7.78□□□□□ -1.16
NPAS4Q8IUM7 AGL-201ENST00000294724 7446 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
NPAS4Q8IUM7 LSM8-204ENST00000424702 4030 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
NPAS4Q8IUM7 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC7.78□□□□□ -1.16
NPAS4Q8IUM7 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
NPAS4Q8IUM7 WDR75-201ENST00000314761 2701 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
NPAS4Q8IUM7 TDGF1P3-202ENST00000602699 2710 ntBASIC7.78□□□□□ -1.16
NPAS4Q8IUM7 SLC16A4-206ENST00000472422 2420 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
NPAS4Q8IUM7 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC7.78□□□□□ -1.16
NPAS4Q8IUM7 OSBPL6-207ENST00000409631 3273 ntTSL 1 (best) BASIC7.77□□□□□ -1.16
NPAS4Q8IUM7 ZNF639-201ENST00000326361 6064 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.16
NPAS4Q8IUM7 SLC8A3-208ENST00000533541 3409 ntTSL 2 BASIC7.77□□□□□ -1.17
NPAS4Q8IUM7 RAB27B-201ENST00000262094 7281 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
NPAS4Q8IUM7 MYLK4-201ENST00000274643 5806 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
NPAS4Q8IUM7 FBXO7-202ENST00000397426 1888 ntTSL 2 BASIC7.77□□□□□ -1.17
NPAS4Q8IUM7 CORIN-202ENST00000502252 3112 ntAPPRIS ALT2 TSL 2 BASIC7.77□□□□□ -1.17
NPAS4Q8IUM7 LGI1-211ENST00000630047 1751 ntTSL 2 BASIC7.77□□□□□ -1.17
NPAS4Q8IUM7 ZMYND8-216ENST00000471951 4053 ntAPPRIS ALT2 TSL 1 (best) BASIC7.77□□□□□ -1.17
NPAS4Q8IUM7 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
NPAS4Q8IUM7 AC007012.2-201ENST00000623206 1676 ntBASIC7.77□□□□□ -1.17
NPAS4Q8IUM7 RAPGEF5-201ENST00000344041 6621 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.17
NPAS4Q8IUM7 HIPK1-211ENST00000626993 8016 ntTSL 5 BASIC7.77□□□□□ -1.17
NPAS4Q8IUM7 Z98755.1-201ENST00000407015 1384 ntBASIC7.77□□□□□ -1.17
NPAS4Q8IUM7 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC7.77□□□□□ -1.17
NPAS4Q8IUM7 MTND4P34-201ENST00000572715 1371 ntBASIC7.77□□□□□ -1.17
NPAS4Q8IUM7 SNCAIP-201ENST00000261367 4986 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
NPAS4Q8IUM7 MAPK10-281ENST00000641170 3070 ntBASIC7.77□□□□□ -1.17
NPAS4Q8IUM7 HESX1-201ENST00000295934 981 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
NPAS4Q8IUM7 FAM133CP-201ENST00000332869 704 ntBASIC7.77□□□□□ -1.17
NPAS4Q8IUM7 Y_RNA.505-201ENST00000384489 102 ntBASIC7.77□□□□□ -1.17
NPAS4Q8IUM7 SUMO3-202ENST00000397893 520 ntTSL 2 BASIC7.77□□□□□ -1.17
NPAS4Q8IUM7 AL445238.1-204ENST00000400311 463 ntBASIC7.77□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 89.4 ms