Protein–RNA interactions for Protein: P28370

SMARCA1, Probable global transcription activator SNF2L1, humanhuman

Predictions only

Length 1,054 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1P28370 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
SMARCA1P28370 RNU6-316P-201ENST00000391027 107 ntBASIC7.36□□□□□ -1.23
SMARCA1P28370 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC7.36□□□□□ -1.23
SMARCA1P28370 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
SMARCA1P28370 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC7.36□□□□□ -1.23
SMARCA1P28370 SOCS5P1-201ENST00000440415 949 ntBASIC7.36□□□□□ -1.23
SMARCA1P28370 TIMM8BP2-201ENST00000445940 251 ntBASIC7.36□□□□□ -1.23
SMARCA1P28370 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC7.36□□□□□ -1.23
SMARCA1P28370 MORF4-201ENST00000447135 971 ntBASIC7.36□□□□□ -1.23
SMARCA1P28370 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC7.36□□□□□ -1.23
SMARCA1P28370 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC7.36□□□□□ -1.23
SMARCA1P28370 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC7.36□□□□□ -1.23
SMARCA1P28370 RN7SL552P-201ENST00000462094 276 ntBASIC7.36□□□□□ -1.23
SMARCA1P28370 AC025181.1-201ENST00000477507 416 ntBASIC7.36□□□□□ -1.23
SMARCA1P28370 RPS27P20-201ENST00000492051 246 ntBASIC7.36□□□□□ -1.23
SMARCA1P28370 AC106822.1-201ENST00000502647 526 ntBASIC7.36□□□□□ -1.23
SMARCA1P28370 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC7.36□□□□□ -1.23
SMARCA1P28370 AC036111.2-201ENST00000533247 901 ntBASIC7.36□□□□□ -1.23
SMARCA1P28370 MAGOHB-204ENST00000539554 666 ntTSL 3 BASIC7.36□□□□□ -1.23
SMARCA1P28370 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC7.36□□□□□ -1.23
SMARCA1P28370 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC7.36□□□□□ -1.23
SMARCA1P28370 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC7.36□□□□□ -1.23
SMARCA1P28370 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC7.36□□□□□ -1.23
SMARCA1P28370 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC7.36□□□□□ -1.23
SMARCA1P28370 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC7.36□□□□□ -1.23
SMARCA1P28370 AC233702.7-202ENST00000582941 211 ntBASIC7.36□□□□□ -1.23
SMARCA1P28370 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
SMARCA1P28370 AL391001.1-201ENST00000602747 715 ntBASIC7.36□□□□□ -1.23
SMARCA1P28370 AC009779.8-202ENST00000607990 932 ntBASIC7.36□□□□□ -1.23
SMARCA1P28370 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC7.36□□□□□ -1.23
SMARCA1P28370 NBPF25P-202ENST00000619932 3827 ntTSL 2 BASIC7.36□□□□□ -1.23
SMARCA1P28370 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC7.36□□□□□ -1.23
SMARCA1P28370 AL136359.1-201ENST00000625090 565 ntTSL 2 BASIC7.36□□□□□ -1.23
SMARCA1P28370 AL596275.2-207ENST00000641188 675 ntBASIC7.36□□□□□ -1.23
SMARCA1P28370 OR7E91P-202ENST00000642062 1198 ntBASIC7.36□□□□□ -1.23
SMARCA1P28370 REST-201ENST00000309042 7300 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
SMARCA1P28370 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
SMARCA1P28370 STK32A-202ENST00000397936 5393 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
SMARCA1P28370 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC7.36□□□□□ -1.23
SMARCA1P28370 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
SMARCA1P28370 AL391261.1-201ENST00000555712 1479 ntBASIC7.36□□□□□ -1.23
SMARCA1P28370 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.23
SMARCA1P28370 LUZP1-203ENST00000418342 8421 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
SMARCA1P28370 AL020995.1-201ENST00000427524 1680 ntTSL 2 BASIC7.35□□□□□ -1.23
SMARCA1P28370 AC007406.5-201ENST00000570140 3170 ntBASIC7.35□□□□□ -1.23
SMARCA1P28370 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
SMARCA1P28370 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
SMARCA1P28370 SLC17A8-201ENST00000323346 3983 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
SMARCA1P28370 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
SMARCA1P28370 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC7.35□□□□□ -1.23
SMARCA1P28370 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC7.35□□□□□ -1.23
SMARCA1P28370 CDY10P-201ENST00000452415 1567 ntBASIC7.35□□□□□ -1.23
SMARCA1P28370 AC024341.1-201ENST00000526444 1552 ntBASIC7.35□□□□□ -1.23
SMARCA1P28370 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
SMARCA1P28370 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
SMARCA1P28370 B3GALT5-203ENST00000380620 13170 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
SMARCA1P28370 RN7SKP86-201ENST00000410454 332 ntBASIC7.35□□□□□ -1.23
SMARCA1P28370 MTND2P9-201ENST00000422293 931 ntBASIC7.35□□□□□ -1.23
SMARCA1P28370 OSTCP4-201ENST00000424397 449 ntBASIC7.35□□□□□ -1.23
SMARCA1P28370 AL606534.4-201ENST00000427176 792 ntTSL 5 BASIC7.35□□□□□ -1.23
SMARCA1P28370 AK3P5-201ENST00000432033 519 ntBASIC7.35□□□□□ -1.23
SMARCA1P28370 AC099796.1-201ENST00000433377 683 ntTSL 3 BASIC7.35□□□□□ -1.23
SMARCA1P28370 AC094019.1-201ENST00000434678 472 ntBASIC7.35□□□□□ -1.23
SMARCA1P28370 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC7.35□□□□□ -1.23
SMARCA1P28370 MTCO3P43-201ENST00000440974 771 ntBASIC7.35□□□□□ -1.23
SMARCA1P28370 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC7.35□□□□□ -1.23
SMARCA1P28370 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
SMARCA1P28370 RN7SL714P-201ENST00000487050 298 ntBASIC7.35□□□□□ -1.23
SMARCA1P28370 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC7.35□□□□□ -1.23
SMARCA1P28370 RNA5SP116-201ENST00000516132 98 ntBASIC7.35□□□□□ -1.23
SMARCA1P28370 OR8K2P-201ENST00000524645 927 ntBASIC7.35□□□□□ -1.23
SMARCA1P28370 AC092451.2-201ENST00000538746 658 ntBASIC7.35□□□□□ -1.23
SMARCA1P28370 MYL2-203ENST00000548438 664 ntTSL 3 BASIC7.35□□□□□ -1.23
SMARCA1P28370 UBE2N-204ENST00000549833 960 ntTSL 3 BASIC7.35□□□□□ -1.23
SMARCA1P28370 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC7.35□□□□□ -1.23
SMARCA1P28370 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC7.35□□□□□ -1.23
SMARCA1P28370 MIR4301-201ENST00000577203 66 ntBASIC7.35□□□□□ -1.23
SMARCA1P28370 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
SMARCA1P28370 SNORA35B-201ENST00000607417 129 ntBASIC7.35□□□□□ -1.23
SMARCA1P28370 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC7.35□□□□□ -1.23
SMARCA1P28370 uc_338.29-201ENST00000615099 168 ntBASIC7.35□□□□□ -1.23
SMARCA1P28370 TCL6_3.1-201ENST00000619064 137 ntBASIC7.35□□□□□ -1.23
SMARCA1P28370 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC7.35□□□□□ -1.23
SMARCA1P28370 AL355860.1-201ENST00000636087 1229 ntAPPRIS P1 TSL 2 BASIC7.35□□□□□ -1.23
SMARCA1P28370 TNPO1P2-201ENST00000426249 2665 ntBASIC7.35□□□□□ -1.23
SMARCA1P28370 GAPVD1-202ENST00000297933 6003 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.23
SMARCA1P28370 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
SMARCA1P28370 MAPK10-261ENST00000641050 3109 ntBASIC7.35□□□□□ -1.23
SMARCA1P28370 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
SMARCA1P28370 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
SMARCA1P28370 AC010328.1-201ENST00000596769 4060 ntTSL 2 BASIC7.35□□□□□ -1.23
SMARCA1P28370 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
SMARCA1P28370 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC7.35□□□□□ -1.23
SMARCA1P28370 KALRN-204ENST00000360013 10806 ntAPPRIS P5 TSL 5 BASIC7.34□□□□□ -1.23
SMARCA1P28370 ADA2-210ENST00000610390 4137 ntTSL 5 BASIC7.34□□□□□ -1.23
SMARCA1P28370 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
SMARCA1P28370 TMTC3-201ENST00000266712 7203 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
SMARCA1P28370 PABPC1P8-201ENST00000452851 2086 ntBASIC7.34□□□□□ -1.23
SMARCA1P28370 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC7.34□□□□□ -1.23
SMARCA1P28370 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC7.34□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 94.6 ms