Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
HMGA1P17096 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
HMGA1P17096 DTHD1-201ENST00000357504 3203 ntTSL 2 BASIC6.37□□□□□ -1.39
HMGA1P17096 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC6.37□□□□□ -1.39
HMGA1P17096 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
HMGA1P17096 CPNE4-208ENST00000511604 2503 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
HMGA1P17096 DCP1A-206ENST00000610213 5994 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
HMGA1P17096 AC096921.2-201ENST00000561507 1916 ntBASIC6.37□□□□□ -1.39
HMGA1P17096 FTO-215ENST00000636491 1676 ntTSL 5 BASIC6.37□□□□□ -1.39
HMGA1P17096 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC6.37□□□□□ -1.39
HMGA1P17096 RBPJP7-201ENST00000442803 1447 ntBASIC6.37□□□□□ -1.39
HMGA1P17096 RBPJP5-201ENST00000449433 1447 ntBASIC6.37□□□□□ -1.39
HMGA1P17096 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC6.37□□□□□ -1.39
HMGA1P17096 TCF7L2-218ENST00000538897 4000 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
HMGA1P17096 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC6.37□□□□□ -1.39
HMGA1P17096 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
HMGA1P17096 RNA5SP375-201ENST00000362975 119 ntBASIC6.37□□□□□ -1.39
HMGA1P17096 RNA5SP510-201ENST00000364697 99 ntBASIC6.37□□□□□ -1.39
HMGA1P17096 CAV1-204ENST00000393470 598 ntTSL 4 BASIC6.37□□□□□ -1.39
HMGA1P17096 MIR1203-201ENST00000408812 85 ntBASIC6.37□□□□□ -1.39
HMGA1P17096 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC6.37□□□□□ -1.39
HMGA1P17096 BX284632.2-201ENST00000421091 399 ntBASIC6.37□□□□□ -1.39
HMGA1P17096 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC6.37□□□□□ -1.39
HMGA1P17096 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC6.37□□□□□ -1.39
HMGA1P17096 AL451136.1-201ENST00000435399 325 ntBASIC6.37□□□□□ -1.39
HMGA1P17096 AL512605.1-202ENST00000441919 381 ntBASIC6.37□□□□□ -1.39
HMGA1P17096 AL359955.2-201ENST00000445380 353 ntBASIC6.37□□□□□ -1.39
HMGA1P17096 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC6.37□□□□□ -1.39
HMGA1P17096 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC6.37□□□□□ -1.39
HMGA1P17096 GEMIN2P1-201ENST00000454246 752 ntBASIC6.37□□□□□ -1.39
HMGA1P17096 SETP20-201ENST00000457046 852 ntBASIC6.37□□□□□ -1.39
HMGA1P17096 AC011476.1-201ENST00000466725 307 ntBASIC6.37□□□□□ -1.39
HMGA1P17096 NDUFB2-210ENST00000475276 539 ntTSL 4 BASIC6.37□□□□□ -1.39
HMGA1P17096 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC6.37□□□□□ -1.39
HMGA1P17096 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC6.37□□□□□ -1.39
HMGA1P17096 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC6.37□□□□□ -1.39
HMGA1P17096 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC6.37□□□□□ -1.39
HMGA1P17096 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC6.37□□□□□ -1.39
HMGA1P17096 RN7SL753P-201ENST00000581238 290 ntBASIC6.37□□□□□ -1.39
HMGA1P17096 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC6.37□□□□□ -1.39
HMGA1P17096 AL117336.3-201ENST00000603160 1107 ntTSL 3 BASIC6.37□□□□□ -1.39
HMGA1P17096 MIR6729-201ENST00000618194 65 ntBASIC6.37□□□□□ -1.39
HMGA1P17096 TCL6_3.1-201ENST00000619064 137 ntBASIC6.37□□□□□ -1.39
HMGA1P17096 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC6.37□□□□□ -1.39
HMGA1P17096 5S_rRNA.28-201ENST00000638107 119 ntBASIC6.37□□□□□ -1.39
HMGA1P17096 TRPM3-212ENST00000396283 3484 ntTSL 5 BASIC6.37□□□□□ -1.39
HMGA1P17096 ZC3H13-201ENST00000242848 8018 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
HMGA1P17096 AP001636.3-201ENST00000533954 2810 ntTSL 2 BASIC6.37□□□□□ -1.39
HMGA1P17096 DIAPH3-206ENST00000465066 2735 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
HMGA1P17096 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.39
HMGA1P17096 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
HMGA1P17096 RIOK2-202ENST00000508447 2149 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
HMGA1P17096 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC6.37□□□□□ -1.39
HMGA1P17096 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
HMGA1P17096 PLEKHG1-201ENST00000358517 7138 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
HMGA1P17096 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
HMGA1P17096 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
HMGA1P17096 AL359091.1-201ENST00000449048 1734 ntBASIC6.36□□□□□ -1.39
HMGA1P17096 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
HMGA1P17096 AC092692.1-201ENST00000623625 2595 ntBASIC6.36□□□□□ -1.39
HMGA1P17096 ZNF91-202ENST00000397082 3572 ntAPPRIS ALT2 TSL 2 BASIC6.36□□□□□ -1.39
HMGA1P17096 FAM227A-205ENST00000535113 10322 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
HMGA1P17096 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC6.36□□□□□ -1.39
HMGA1P17096 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC6.36□□□□□ -1.39
HMGA1P17096 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC6.36□□□□□ -1.39
HMGA1P17096 GNL2P1-201ENST00000451274 2190 ntBASIC6.36□□□□□ -1.39
HMGA1P17096 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
HMGA1P17096 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
HMGA1P17096 AC245884.2-201ENST00000426257 404 ntBASIC6.36□□□□□ -1.39
HMGA1P17096 MTND6P12-201ENST00000428247 522 ntBASIC6.36□□□□□ -1.39
HMGA1P17096 HNRNPA1P18-201ENST00000433537 927 ntBASIC6.36□□□□□ -1.39
HMGA1P17096 PCBP2P1-201ENST00000437262 977 ntBASIC6.36□□□□□ -1.39
HMGA1P17096 AC092801.1-201ENST00000443763 581 ntTSL 3 BASIC6.36□□□□□ -1.39
HMGA1P17096 AL022237.1-201ENST00000446663 358 ntBASIC6.36□□□□□ -1.39
HMGA1P17096 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC6.36□□□□□ -1.39
HMGA1P17096 AC016027.4-201ENST00000450866 277 ntBASIC6.36□□□□□ -1.39
HMGA1P17096 SPIRE1-206ENST00000453447 2107 ntTSL 5 BASIC6.36□□□□□ -1.39
HMGA1P17096 ACA64.1-201ENST00000459171 127 ntBASIC6.36□□□□□ -1.39
HMGA1P17096 AC007998.1-201ENST00000474156 672 ntBASIC6.36□□□□□ -1.39
HMGA1P17096 AC068522.1-201ENST00000482895 345 ntBASIC6.36□□□□□ -1.39
HMGA1P17096 AC090592.1-202ENST00000533049 568 ntTSL 4 BASIC6.36□□□□□ -1.39
HMGA1P17096 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
HMGA1P17096 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC6.36□□□□□ -1.39
HMGA1P17096 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
HMGA1P17096 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
HMGA1P17096 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC6.36□□□□□ -1.39
HMGA1P17096 AC024589.2-201ENST00000605642 1294 ntBASIC6.36□□□□□ -1.39
HMGA1P17096 AL021368.3-201ENST00000607119 578 ntBASIC6.36□□□□□ -1.39
HMGA1P17096 AC103703.1-201ENST00000634783 663 ntBASIC6.36□□□□□ -1.39
HMGA1P17096 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC6.36□□□□□ -1.39
HMGA1P17096 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
HMGA1P17096 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
HMGA1P17096 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
HMGA1P17096 LIPA-203ENST00000371837 2513 ntTSL 2 BASIC6.36□□□□□ -1.39
HMGA1P17096 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
HMGA1P17096 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC6.36□□□□□ -1.39
HMGA1P17096 KARSP1-201ENST00000451871 1752 ntBASIC6.36□□□□□ -1.39
HMGA1P17096 MEF2C-244ENST00000636998 5936 ntTSL 5 BASIC6.36□□□□□ -1.39
HMGA1P17096 DNAJC6-203ENST00000395325 5743 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
HMGA1P17096 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms