Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 AC122710.3-201ENST00000606566 541 ntBASIC6.12□□□□□ -1.43
SNX18Q96RF0 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
SNX18Q96RF0 MIR6070-201ENST00000613967 103 ntBASIC6.12□□□□□ -1.43
SNX18Q96RF0 AC004836.1-201ENST00000623032 634 ntBASIC6.12□□□□□ -1.43
SNX18Q96RF0 SNX18P10-201ENST00000625014 519 ntBASIC6.12□□□□□ -1.43
SNX18Q96RF0 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC6.12□□□□□ -1.43
SNX18Q96RF0 AL356118.1-201ENST00000635272 1078 ntBASIC6.12□□□□□ -1.43
SNX18Q96RF0 AC006453.3-201ENST00000635891 377 ntBASIC6.12□□□□□ -1.43
SNX18Q96RF0 AL445984.1-201ENST00000637834 659 ntBASIC6.12□□□□□ -1.43
SNX18Q96RF0 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
SNX18Q96RF0 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC6.12□□□□□ -1.43
SNX18Q96RF0 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
SNX18Q96RF0 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
SNX18Q96RF0 AC074141.1-201ENST00000588129 2995 ntBASIC6.12□□□□□ -1.43
SNX18Q96RF0 DLG2-230ENST00000532653 2891 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
SNX18Q96RF0 AC027575.3-201ENST00000583058 2747 ntBASIC6.12□□□□□ -1.43
SNX18Q96RF0 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC6.11□□□□□ -1.43
SNX18Q96RF0 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC6.11□□□□□ -1.43
SNX18Q96RF0 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
SNX18Q96RF0 AC137056.2-201ENST00000624055 1958 ntBASIC6.11□□□□□ -1.43
SNX18Q96RF0 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
SNX18Q96RF0 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
SNX18Q96RF0 GUCY2C-201ENST00000261170 3844 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
SNX18Q96RF0 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC6.11□□□□□ -1.43
SNX18Q96RF0 AC096992.2-201ENST00000609553 1684 ntBASIC6.11□□□□□ -1.43
SNX18Q96RF0 BX284613.1-201ENST00000452221 1641 ntBASIC6.11□□□□□ -1.43
SNX18Q96RF0 ATP5BP1-201ENST00000411980 1574 ntBASIC6.11□□□□□ -1.43
SNX18Q96RF0 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
SNX18Q96RF0 LINC01011-204ENST00000605901 1573 ntTSL 2 BASIC6.11□□□□□ -1.43
SNX18Q96RF0 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
SNX18Q96RF0 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
SNX18Q96RF0 HESX1-201ENST00000295934 981 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
SNX18Q96RF0 RNU12-2P-201ENST00000364789 156 ntBASIC6.11□□□□□ -1.43
SNX18Q96RF0 CNTRL-202ENST00000373844 713 ntTSL 3 BASIC6.11□□□□□ -1.43
SNX18Q96RF0 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC6.11□□□□□ -1.43
SNX18Q96RF0 MLXIP-203ENST00000377037 805 ntTSL 5 BASIC6.11□□□□□ -1.43
SNX18Q96RF0 ELMO1-AS1-201ENST00000419535 528 ntTSL 4 BASIC6.11□□□□□ -1.43
SNX18Q96RF0 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
SNX18Q96RF0 AC019205.1-201ENST00000421830 730 ntBASIC6.11□□□□□ -1.43
SNX18Q96RF0 AL031767.1-201ENST00000426374 386 ntTSL 5 BASIC6.11□□□□□ -1.43
SNX18Q96RF0 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC6.11□□□□□ -1.43
SNX18Q96RF0 AL139042.1-201ENST00000429137 305 ntTSL 3 BASIC6.11□□□□□ -1.43
SNX18Q96RF0 GTF2A1-202ENST00000434192 1199 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
SNX18Q96RF0 Z80107.1-201ENST00000436830 412 ntBASIC6.11□□□□□ -1.43
SNX18Q96RF0 BX005266.3-201ENST00000443013 1075 ntBASIC6.11□□□□□ -1.43
SNX18Q96RF0 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC6.11□□□□□ -1.43
SNX18Q96RF0 LINC01431-203ENST00000452395 505 ntTSL 2 BASIC6.11□□□□□ -1.43
SNX18Q96RF0 UCK2-206ENST00000470820 1083 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
SNX18Q96RF0 AC090589.1-201ENST00000473109 362 ntBASIC6.11□□□□□ -1.43
SNX18Q96RF0 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC6.11□□□□□ -1.43
SNX18Q96RF0 AC078788.1-201ENST00000498457 634 ntTSL 3 BASIC6.11□□□□□ -1.43
SNX18Q96RF0 GTF2IP9-201ENST00000502460 301 ntBASIC6.11□□□□□ -1.43
SNX18Q96RF0 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC6.11□□□□□ -1.43
SNX18Q96RF0 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC6.11□□□□□ -1.43
SNX18Q96RF0 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC6.11□□□□□ -1.43
SNX18Q96RF0 AC092435.1-202ENST00000512752 518 ntTSL 3 BASIC6.11□□□□□ -1.43
SNX18Q96RF0 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC6.11□□□□□ -1.43
SNX18Q96RF0 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC6.11□□□□□ -1.43
SNX18Q96RF0 AC018953.1-201ENST00000523265 730 ntTSL 2 BASIC6.11□□□□□ -1.43
SNX18Q96RF0 AP001372.4-201ENST00000524889 472 ntBASIC6.11□□□□□ -1.43
SNX18Q96RF0 AC079089.1-203ENST00000533300 431 ntTSL 5 BASIC6.11□□□□□ -1.43
SNX18Q96RF0 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
SNX18Q96RF0 AC021979.2-201ENST00000553644 209 ntTSL 5 BASIC6.11□□□□□ -1.43
SNX18Q96RF0 CKS1BP1-201ENST00000555221 240 ntBASIC6.11□□□□□ -1.43
SNX18Q96RF0 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC6.11□□□□□ -1.43
SNX18Q96RF0 AL109628.1-201ENST00000556877 366 ntBASIC6.11□□□□□ -1.43
SNX18Q96RF0 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC6.11□□□□□ -1.43
SNX18Q96RF0 HMGN1P26-201ENST00000558737 303 ntBASIC6.11□□□□□ -1.43
SNX18Q96RF0 IQCK-206ENST00000564186 882 ntAPPRIS ALT2 TSL 2 BASIC6.11□□□□□ -1.43
SNX18Q96RF0 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC6.11□□□□□ -1.43
SNX18Q96RF0 AC091932.1-201ENST00000569381 427 ntBASIC6.11□□□□□ -1.43
SNX18Q96RF0 AC004232.1-201ENST00000571388 208 ntBASIC6.11□□□□□ -1.43
SNX18Q96RF0 AC068418.1-201ENST00000582990 404 ntTSL 3 BASIC6.11□□□□□ -1.43
SNX18Q96RF0 AC020914.7-201ENST00000594477 545 ntBASIC6.11□□□□□ -1.43
SNX18Q96RF0 AC010326.3-201ENST00000597780 679 ntTSL 5 BASIC6.11□□□□□ -1.43
SNX18Q96RF0 AC004908.1-201ENST00000606572 541 ntBASIC6.11□□□□□ -1.43
SNX18Q96RF0 AL662797.2-201ENST00000607333 527 ntTSL 2 BASIC6.11□□□□□ -1.43
SNX18Q96RF0 AL355802.4-201ENST00000607635 548 ntBASIC6.11□□□□□ -1.43
SNX18Q96RF0 Z98949.1-217ENST00000609275 994 ntTSL 5 BASIC6.11□□□□□ -1.43
SNX18Q96RF0 Six3os1_4.1-201ENST00000615706 324 ntBASIC6.11□□□□□ -1.43
SNX18Q96RF0 AMYH02020865.1-207ENST00000617096 458 ntTSL 3 BASIC6.11□□□□□ -1.43
SNX18Q96RF0 AC244100.4-201ENST00000617747 388 ntBASIC6.11□□□□□ -1.43
SNX18Q96RF0 AL450990.1-201ENST00000632868 582 ntTSL 4 BASIC6.11□□□□□ -1.43
SNX18Q96RF0 OR6C71P-202ENST00000641886 1107 ntBASIC6.11□□□□□ -1.43
SNX18Q96RF0 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
SNX18Q96RF0 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC6.11□□□□□ -1.43
SNX18Q96RF0 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
SNX18Q96RF0 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
SNX18Q96RF0 NLRP3P1-201ENST00000622303 1785 ntBASIC6.11□□□□□ -1.43
SNX18Q96RF0 PNPLA4-204ENST00000537427 2559 ntTSL 2 BASIC6.11□□□□□ -1.43
SNX18Q96RF0 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
SNX18Q96RF0 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SNX18Q96RF0 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC6.1□□□□□ -1.43
SNX18Q96RF0 GJA10-203ENST00000638915 1479 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
SNX18Q96RF0 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
SNX18Q96RF0 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
SNX18Q96RF0 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SNX18Q96RF0 AC232271.1-201ENST00000602455 2715 ntBASIC6.1□□□□□ -1.43
SNX18Q96RF0 PTPN2-212ENST00000591497 3390 ntTSL 5 BASIC6.1□□□□□ -1.43
SNX18Q96RF0 AL512353.3-201ENST00000417517 1326 ntBASIC6.1□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 92.7 ms