Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC6.12□□□□□ -1.43
VPS33AQ96AX1 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
VPS33AQ96AX1 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
VPS33AQ96AX1 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
VPS33AQ96AX1 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
VPS33AQ96AX1 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
VPS33AQ96AX1 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
VPS33AQ96AX1 FASLG-201ENST00000340030 917 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
VPS33AQ96AX1 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
VPS33AQ96AX1 PRR9-201ENST00000368744 1229 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
VPS33AQ96AX1 SSX3-202ENST00000376893 800 ntTSL 2 BASIC6.12□□□□□ -1.43
VPS33AQ96AX1 EEF1GP6-201ENST00000402309 905 ntBASIC6.12□□□□□ -1.43
VPS33AQ96AX1 AL136100.1-201ENST00000407696 330 ntBASIC6.12□□□□□ -1.43
VPS33AQ96AX1 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC6.12□□□□□ -1.43
VPS33AQ96AX1 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
VPS33AQ96AX1 AL359962.1-201ENST00000417969 303 ntTSL 5 BASIC6.12□□□□□ -1.43
VPS33AQ96AX1 AL035401.1-201ENST00000420572 871 ntTSL 3 BASIC6.12□□□□□ -1.43
VPS33AQ96AX1 GRPEL2P2-201ENST00000421856 670 ntBASIC6.12□□□□□ -1.43
VPS33AQ96AX1 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC6.12□□□□□ -1.43
VPS33AQ96AX1 AC009362.1-201ENST00000427253 406 ntBASIC6.12□□□□□ -1.43
VPS33AQ96AX1 AC104162.1-204ENST00000443346 708 ntTSL 3 BASIC6.12□□□□□ -1.43
VPS33AQ96AX1 AL022237.1-201ENST00000446663 358 ntBASIC6.12□□□□□ -1.43
VPS33AQ96AX1 AC009963.4-201ENST00000448535 339 ntBASIC6.12□□□□□ -1.43
VPS33AQ96AX1 AL357143.1-201ENST00000457239 934 ntTSL 5 BASIC6.12□□□□□ -1.43
VPS33AQ96AX1 C2orf74-204ENST00000464909 726 ntAPPRIS P2 TSL 2 BASIC6.12□□□□□ -1.43
VPS33AQ96AX1 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
VPS33AQ96AX1 CAMTA1-205ENST00000467404 546 ntTSL 3 BASIC6.12□□□□□ -1.43
VPS33AQ96AX1 SLC25A51P1-201ENST00000468432 871 ntBASIC6.12□□□□□ -1.43
VPS33AQ96AX1 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC6.12□□□□□ -1.43
VPS33AQ96AX1 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC6.12□□□□□ -1.43
VPS33AQ96AX1 SNRPCP3-201ENST00000474888 476 ntBASIC6.12□□□□□ -1.43
VPS33AQ96AX1 AF305872.1-201ENST00000485217 471 ntBASIC6.12□□□□□ -1.43
VPS33AQ96AX1 TAS2R50-201ENST00000506868 1000 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
VPS33AQ96AX1 ENPP7P3-201ENST00000509123 241 ntBASIC6.12□□□□□ -1.43
VPS33AQ96AX1 AC092903.2-201ENST00000510244 427 ntTSL 5 BASIC6.12□□□□□ -1.43
VPS33AQ96AX1 C8orf37-AS1-201ENST00000517437 456 ntTSL 3 BASIC6.12□□□□□ -1.43
VPS33AQ96AX1 IGKV1D-22-201ENST00000518953 324 ntBASIC6.12□□□□□ -1.43
VPS33AQ96AX1 AF235103.1-201ENST00000530223 439 ntTSL 3 BASIC6.12□□□□□ -1.43
VPS33AQ96AX1 TPRXL-210ENST00000532753 478 ntTSL 4 BASIC6.12□□□□□ -1.43
VPS33AQ96AX1 PSMC1P8-201ENST00000536820 1296 ntBASIC6.12□□□□□ -1.43
VPS33AQ96AX1 VEPH1-219ENST00000537559 992 ntTSL 5 BASIC6.12□□□□□ -1.43
VPS33AQ96AX1 PRH1-204ENST00000539853 837 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
VPS33AQ96AX1 AC069234.3-201ENST00000544939 569 ntTSL 4 BASIC6.12□□□□□ -1.43
VPS33AQ96AX1 AC026770.1-201ENST00000558994 581 ntTSL 4 BASIC6.12□□□□□ -1.43
VPS33AQ96AX1 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
VPS33AQ96AX1 CCL2-202ENST00000580907 736 ntTSL 2 BASIC6.12□□□□□ -1.43
VPS33AQ96AX1 AC068254.1-201ENST00000584753 483 ntTSL 3 BASIC6.12□□□□□ -1.43
VPS33AQ96AX1 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC6.12□□□□□ -1.43
VPS33AQ96AX1 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC6.12□□□□□ -1.43
VPS33AQ96AX1 OR51B2-201ENST00000624187 939 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
VPS33AQ96AX1 CYP2C8-213ENST00000628935 924 ntTSL 5 BASIC6.12□□□□□ -1.43
VPS33AQ96AX1 AP002512.4-202ENST00000641599 4530 ntBASIC6.12□□□□□ -1.43
VPS33AQ96AX1 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
VPS33AQ96AX1 GDA-209ENST00000545168 5362 ntTSL 2 BASIC6.12□□□□□ -1.43
VPS33AQ96AX1 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
VPS33AQ96AX1 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
VPS33AQ96AX1 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC6.11□□□□□ -1.43
VPS33AQ96AX1 AOX3P-204ENST00000491025 2107 ntBASIC6.11□□□□□ -1.43
VPS33AQ96AX1 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC6.11□□□□□ -1.43
VPS33AQ96AX1 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC6.11□□□□□ -1.43
VPS33AQ96AX1 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
VPS33AQ96AX1 AC126474.2-201ENST00000623268 1750 ntBASIC6.11□□□□□ -1.43
VPS33AQ96AX1 AC092724.1-201ENST00000624623 3397 ntBASIC6.11□□□□□ -1.43
VPS33AQ96AX1 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
VPS33AQ96AX1 SHQ1P1-201ENST00000437111 1544 ntBASIC6.11□□□□□ -1.43
VPS33AQ96AX1 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
VPS33AQ96AX1 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC6.11□□□□□ -1.43
VPS33AQ96AX1 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
VPS33AQ96AX1 OR4F16-201ENST00000332831 995 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
VPS33AQ96AX1 RNU1-59P-201ENST00000364829 162 ntBASIC6.11□□□□□ -1.43
VPS33AQ96AX1 RN7SKP186-201ENST00000365371 303 ntBASIC6.11□□□□□ -1.43
VPS33AQ96AX1 NQO1-202ENST00000379046 1105 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
VPS33AQ96AX1 CAV1-204ENST00000393470 598 ntTSL 4 BASIC6.11□□□□□ -1.43
VPS33AQ96AX1 RN7SKP91-201ENST00000410852 288 ntBASIC6.11□□□□□ -1.43
VPS33AQ96AX1 AC019130.1-201ENST00000413841 391 ntTSL 2 BASIC6.11□□□□□ -1.43
VPS33AQ96AX1 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC6.11□□□□□ -1.43
VPS33AQ96AX1 AC009303.1-201ENST00000426307 352 ntBASIC6.11□□□□□ -1.43
VPS33AQ96AX1 OR4F29-201ENST00000426406 995 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
VPS33AQ96AX1 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC6.11□□□□□ -1.43
VPS33AQ96AX1 LINC00349-201ENST00000448748 841 ntTSL 5 BASIC6.11□□□□□ -1.43
VPS33AQ96AX1 LINC01961-201ENST00000449954 745 ntTSL 5 BASIC6.11□□□□□ -1.43
VPS33AQ96AX1 OR4F3-201ENST00000456475 995 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
VPS33AQ96AX1 AC010655.2-201ENST00000493710 662 ntTSL 3 BASIC6.11□□□□□ -1.43
VPS33AQ96AX1 AC022126.1-201ENST00000502995 593 ntTSL 4 BASIC6.11□□□□□ -1.43
VPS33AQ96AX1 AC109588.1-201ENST00000507759 726 ntTSL 3 BASIC6.11□□□□□ -1.43
VPS33AQ96AX1 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC6.11□□□□□ -1.43
VPS33AQ96AX1 IGKV1D-32-201ENST00000517449 318 ntBASIC6.11□□□□□ -1.43
VPS33AQ96AX1 AC022973.2-201ENST00000520146 549 ntTSL 4 BASIC6.11□□□□□ -1.43
VPS33AQ96AX1 BAALC-AS1-208ENST00000523614 582 ntTSL 5 BASIC6.11□□□□□ -1.43
VPS33AQ96AX1 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC6.11□□□□□ -1.43
VPS33AQ96AX1 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC6.11□□□□□ -1.43
VPS33AQ96AX1 HMGN2P47-201ENST00000559378 272 ntBASIC6.11□□□□□ -1.43
VPS33AQ96AX1 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC6.11□□□□□ -1.43
VPS33AQ96AX1 DYNLRB2-204ENST00000562982 492 ntTSL 3 BASIC6.11□□□□□ -1.43
VPS33AQ96AX1 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC6.11□□□□□ -1.43
VPS33AQ96AX1 AC005323.1-203ENST00000585303 566 ntTSL 5 BASIC6.11□□□□□ -1.43
VPS33AQ96AX1 ZNF790-AS1-201ENST00000587278 653 ntTSL 5 BASIC6.11□□□□□ -1.43
VPS33AQ96AX1 AC040170.1-201ENST00000602425 564 ntTSL 2 BASIC6.11□□□□□ -1.43
VPS33AQ96AX1 HNRNPA3P9-201ENST00000604913 979 ntBASIC6.11□□□□□ -1.43
VPS33AQ96AX1 AL008723.3-201ENST00000608926 449 ntBASIC6.11□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 87.3 ms