Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 RNF4-214ENST00000511600 4123 ntAPPRIS P1 TSL 2 BASIC6.85□□□□□ -1.31
CHRNA1P02708 EYA3-204ENST00000436342 5943 ntTSL 2 BASIC6.85□□□□□ -1.31
CHRNA1P02708 CPED1-201ENST00000310396 5340 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
CHRNA1P02708 RNU1-24P-201ENST00000364285 165 ntBASIC6.85□□□□□ -1.31
CHRNA1P02708 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC6.85□□□□□ -1.31
CHRNA1P02708 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC6.85□□□□□ -1.31
CHRNA1P02708 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC6.85□□□□□ -1.31
CHRNA1P02708 AF015262.1-201ENST00000455028 698 ntTSL 3 BASIC6.85□□□□□ -1.31
CHRNA1P02708 AC092824.1-201ENST00000483524 576 ntBASIC6.85□□□□□ -1.31
CHRNA1P02708 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
CHRNA1P02708 C5orf64-204ENST00000507461 535 ntTSL 4 BASIC6.85□□□□□ -1.31
CHRNA1P02708 AC253576.1-201ENST00000511645 1156 ntBASIC6.85□□□□□ -1.31
CHRNA1P02708 SNORD46.2-201ENST00000516021 102 ntBASIC6.85□□□□□ -1.31
CHRNA1P02708 Y_RNA.667-201ENST00000516212 107 ntBASIC6.85□□□□□ -1.31
CHRNA1P02708 RNA5SP438-201ENST00000516561 112 ntBASIC6.85□□□□□ -1.31
CHRNA1P02708 Y_RNA.710-201ENST00000516975 110 ntBASIC6.85□□□□□ -1.31
CHRNA1P02708 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC6.85□□□□□ -1.31
CHRNA1P02708 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC6.85□□□□□ -1.31
CHRNA1P02708 AC084337.1-201ENST00000524809 686 ntBASIC6.85□□□□□ -1.31
CHRNA1P02708 MAGOHB-204ENST00000539554 666 ntTSL 3 BASIC6.85□□□□□ -1.31
CHRNA1P02708 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC6.85□□□□□ -1.31
CHRNA1P02708 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC6.85□□□□□ -1.31
CHRNA1P02708 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC6.85□□□□□ -1.31
CHRNA1P02708 AL596275.2-208ENST00000641192 594 ntBASIC6.85□□□□□ -1.31
CHRNA1P02708 G6PC-201ENST00000253801 3096 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
CHRNA1P02708 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
CHRNA1P02708 INHBA-AS1-203ENST00000422822 2312 ntTSL 2 BASIC6.85□□□□□ -1.31
CHRNA1P02708 TGFB2-202ENST00000366930 4969 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
CHRNA1P02708 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
CHRNA1P02708 NUMB-229ENST00000557597 3547 ntAPPRIS P3 TSL 1 (best) BASIC6.85□□□□□ -1.31
CHRNA1P02708 PLCH1-203ENST00000447496 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC6.85□□□□□ -1.31
CHRNA1P02708 SERPINB11-205ENST00000544088 1846 ntAPPRIS P1 TSL 2 BASIC6.85□□□□□ -1.31
CHRNA1P02708 EIF4ENIF1-205ENST00000397523 3420 ntTSL 5 BASIC6.85□□□□□ -1.31
CHRNA1P02708 RAB9B-201ENST00000243298 3748 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
CHRNA1P02708 PRLR-216ENST00000542609 1764 ntTSL 5 BASIC6.85□□□□□ -1.31
CHRNA1P02708 KIAA1549L-202ENST00000321505 11678 ntAPPRIS P2 TSL 1 (best) BASIC6.85□□□□□ -1.31
CHRNA1P02708 NUMB-201ENST00000355058 3342 ntAPPRIS ALT1 TSL 5 BASIC6.84□□□□□ -1.31
CHRNA1P02708 OR7A17-202ENST00000641113 3639 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
CHRNA1P02708 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
CHRNA1P02708 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC6.84□□□□□ -1.31
CHRNA1P02708 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
CHRNA1P02708 GRIK2-205ENST00000369138 4921 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
CHRNA1P02708 ATP5S-202ENST00000311459 10212 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
CHRNA1P02708 CREM-203ENST00000344351 1625 ntTSL 2 BASIC6.84□□□□□ -1.31
CHRNA1P02708 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC6.84□□□□□ -1.31
CHRNA1P02708 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC6.84□□□□□ -1.31
CHRNA1P02708 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.31
CHRNA1P02708 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC6.84□□□□□ -1.31
CHRNA1P02708 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC6.84□□□□□ -1.31
CHRNA1P02708 RN7SKP81-201ENST00000365603 331 ntBASIC6.84□□□□□ -1.31
CHRNA1P02708 AL096800.1-201ENST00000405326 893 ntBASIC6.84□□□□□ -1.31
CHRNA1P02708 U3.43-201ENST00000410734 213 ntBASIC6.84□□□□□ -1.31
CHRNA1P02708 CFL1P4-201ENST00000451536 498 ntBASIC6.84□□□□□ -1.31
CHRNA1P02708 OR2A1-AS1-202ENST00000467944 422 ntBASIC6.84□□□□□ -1.31
CHRNA1P02708 PPIAP19-201ENST00000486414 492 ntBASIC6.84□□□□□ -1.31
CHRNA1P02708 AC023818.1-201ENST00000498379 384 ntBASIC6.84□□□□□ -1.31
CHRNA1P02708 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC6.84□□□□□ -1.31
CHRNA1P02708 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
CHRNA1P02708 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC6.84□□□□□ -1.31
CHRNA1P02708 OTX2-203ENST00000554559 715 ntTSL 5 BASIC6.84□□□□□ -1.31
CHRNA1P02708 RPA2P1-201ENST00000556557 721 ntBASIC6.84□□□□□ -1.31
CHRNA1P02708 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC6.84□□□□□ -1.31
CHRNA1P02708 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC6.84□□□□□ -1.31
CHRNA1P02708 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC6.84□□□□□ -1.31
CHRNA1P02708 AP005119.1-201ENST00000580956 292 ntBASIC6.84□□□□□ -1.31
CHRNA1P02708 AC108673.3-201ENST00000609183 335 ntBASIC6.84□□□□□ -1.31
CHRNA1P02708 AP000894.4-201ENST00000610185 483 ntBASIC6.84□□□□□ -1.31
CHRNA1P02708 AC245014.3-201ENST00000618589 347 ntBASIC6.84□□□□□ -1.31
CHRNA1P02708 AL392046.2-202ENST00000635301 1113 ntTSL 5 BASIC6.84□□□□□ -1.31
CHRNA1P02708 WNK3-201ENST00000354646 11341 ntAPPRIS P3 TSL 1 (best) BASIC6.84□□□□□ -1.31
CHRNA1P02708 ST7-203ENST00000393443 2360 ntTSL 2 BASIC6.84□□□□□ -1.31
CHRNA1P02708 NBPF9-205ENST00000613595 4527 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
CHRNA1P02708 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
CHRNA1P02708 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC6.84□□□□□ -1.31
CHRNA1P02708 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
CHRNA1P02708 FOXJ3-209ENST00000545068 5165 ntAPPRIS P3 TSL 5 BASIC6.84□□□□□ -1.31
CHRNA1P02708 SLC39A12-202ENST00000377371 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC6.84□□□□□ -1.32
CHRNA1P02708 RBMY1HP-201ENST00000382759 1389 ntBASIC6.83□□□□□ -1.32
CHRNA1P02708 LGALS8-220ENST00000526634 1852 ntAPPRIS ALT2 TSL 5 BASIC6.83□□□□□ -1.32
CHRNA1P02708 NAV3-202ENST00000536525 7386 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
CHRNA1P02708 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC6.83□□□□□ -1.32
CHRNA1P02708 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC6.83□□□□□ -1.32
CHRNA1P02708 RBMXL1-201ENST00000321792 4799 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
CHRNA1P02708 EGFEM1P-205ENST00000483846 2327 ntTSL 5 BASIC6.83□□□□□ -1.32
CHRNA1P02708 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
CHRNA1P02708 SRGAP1-206ENST00000543397 5652 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
CHRNA1P02708 AL021877.2-201ENST00000624442 10684 ntBASIC6.83□□□□□ -1.32
CHRNA1P02708 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
CHRNA1P02708 LRRFIP2-201ENST00000336686 3208 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
CHRNA1P02708 STIL-201ENST00000337817 5087 ntAPPRIS ALT2 TSL 5 BASIC6.83□□□□□ -1.32
CHRNA1P02708 STAG1-201ENST00000236698 5951 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
CHRNA1P02708 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC6.83□□□□□ -1.32
CHRNA1P02708 TMSB4XP2-201ENST00000335179 210 ntBASIC6.83□□□□□ -1.32
CHRNA1P02708 RNU6-316P-201ENST00000391027 107 ntBASIC6.83□□□□□ -1.32
CHRNA1P02708 AL050335.1-201ENST00000396909 869 ntBASIC6.83□□□□□ -1.32
CHRNA1P02708 AL096711.1-201ENST00000404780 554 ntBASIC6.83□□□□□ -1.32
CHRNA1P02708 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC6.83□□□□□ -1.32
CHRNA1P02708 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC6.83□□□□□ -1.32
CHRNA1P02708 CHEK2P5-201ENST00000423877 246 ntBASIC6.83□□□□□ -1.32
CHRNA1P02708 MTND6P12-201ENST00000428247 522 ntBASIC6.83□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 88.4 ms