Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
LDLRP01130 TMEM217-202ENST00000356757 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
LDLRP01130 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
LDLRP01130 AC010624.4-201ENST00000597606 1351 ntBASIC6.23□□□□□ -1.41
LDLRP01130 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
LDLRP01130 CLEC9A-201ENST00000355819 1734 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
LDLRP01130 TANK-203ENST00000402568 878 ntTSL 5 BASIC6.23□□□□□ -1.41
LDLRP01130 AL023284.3-201ENST00000407767 334 ntBASIC6.23□□□□□ -1.41
LDLRP01130 RNA5SP431-201ENST00000410312 120 ntBASIC6.23□□□□□ -1.41
LDLRP01130 AC016769.2-201ENST00000414815 475 ntBASIC6.23□□□□□ -1.41
LDLRP01130 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
LDLRP01130 AC096677.2-201ENST00000430471 598 ntTSL 5 BASIC6.23□□□□□ -1.41
LDLRP01130 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
LDLRP01130 OR6R1P-201ENST00000431838 940 ntBASIC6.23□□□□□ -1.41
LDLRP01130 AC004470.1-201ENST00000442155 382 ntTSL 5 BASIC6.23□□□□□ -1.41
LDLRP01130 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC6.23□□□□□ -1.41
LDLRP01130 AC009948.1-203ENST00000450044 793 ntTSL 3 BASIC6.23□□□□□ -1.41
LDLRP01130 NDUFA5P5-201ENST00000468361 342 ntBASIC6.23□□□□□ -1.41
LDLRP01130 NPM1P27-201ENST00000502784 830 ntBASIC6.23□□□□□ -1.41
LDLRP01130 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC6.23□□□□□ -1.41
LDLRP01130 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC6.23□□□□□ -1.41
LDLRP01130 RNU6-751P-201ENST00000516382 101 ntBASIC6.23□□□□□ -1.41
LDLRP01130 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC6.23□□□□□ -1.41
LDLRP01130 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC6.23□□□□□ -1.41
LDLRP01130 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC6.23□□□□□ -1.41
LDLRP01130 GNG2-203ENST00000553432 577 ntTSL 4 BASIC6.23□□□□□ -1.41
LDLRP01130 AL359232.1-202ENST00000556874 1206 ntTSL 2 BASIC6.23□□□□□ -1.41
LDLRP01130 PPIAP6-201ENST00000557078 499 ntBASIC6.23□□□□□ -1.41
LDLRP01130 AC106785.4-201ENST00000569492 412 ntBASIC6.23□□□□□ -1.41
LDLRP01130 AC025283.1-201ENST00000572039 734 ntBASIC6.23□□□□□ -1.41
LDLRP01130 PPIAL4A-201ENST00000577856 660 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
LDLRP01130 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
LDLRP01130 AC010519.1-201ENST00000599924 344 ntTSL 5 BASIC6.23□□□□□ -1.41
LDLRP01130 LINC00484-208ENST00000609752 591 ntTSL 4 BASIC6.23□□□□□ -1.41
LDLRP01130 SLC8A1-AS1-218ENST00000610721 956 ntTSL 5 BASIC6.23□□□□□ -1.41
LDLRP01130 LINC00836-201ENST00000625325 582 ntTSL 4 BASIC6.23□□□□□ -1.41
LDLRP01130 SAMD12-AS1-201ENST00000625758 718 ntTSL 5 BASIC6.23□□□□□ -1.41
LDLRP01130 AP001052.1-201ENST00000626421 99 ntBASIC6.23□□□□□ -1.41
LDLRP01130 BCL2L14-203ENST00000308721 1897 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
LDLRP01130 AC079753.1-201ENST00000623243 3868 ntBASIC6.23□□□□□ -1.41
LDLRP01130 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC6.23□□□□□ -1.41
LDLRP01130 KIAA0391-203ENST00000534898 2611 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
LDLRP01130 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
LDLRP01130 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
LDLRP01130 ADAL-201ENST00000389651 1559 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
LDLRP01130 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC6.23□□□□□ -1.41
LDLRP01130 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC6.22□□□□□ -1.41
LDLRP01130 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
LDLRP01130 BX284613.1-201ENST00000452221 1641 ntBASIC6.22□□□□□ -1.41
LDLRP01130 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC6.22□□□□□ -1.41
LDLRP01130 NAPG-201ENST00000322897 3548 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
LDLRP01130 ACPP-202ENST00000351273 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
LDLRP01130 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
LDLRP01130 RNA5SP350-201ENST00000363298 111 ntBASIC6.22□□□□□ -1.41
LDLRP01130 RNA5SP433-201ENST00000364491 114 ntBASIC6.22□□□□□ -1.41
LDLRP01130 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC6.22□□□□□ -1.41
LDLRP01130 PPIAP26-201ENST00000377951 522 ntBASIC6.22□□□□□ -1.41
LDLRP01130 TMA16P2-201ENST00000413187 601 ntBASIC6.22□□□□□ -1.41
LDLRP01130 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC6.22□□□□□ -1.41
LDLRP01130 VN1R53P-201ENST00000429536 957 ntBASIC6.22□□□□□ -1.41
LDLRP01130 HSFX3-201ENST00000431993 1264 ntAPPRIS P1 TSL 3 BASIC6.22□□□□□ -1.41
LDLRP01130 ARL4AP4-201ENST00000434170 518 ntBASIC6.22□□□□□ -1.41
LDLRP01130 DPP10-AS1-202ENST00000448663 644 ntTSL 3 BASIC6.22□□□□□ -1.41
LDLRP01130 PPIAP20-201ENST00000449839 135 ntBASIC6.22□□□□□ -1.41
LDLRP01130 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC6.22□□□□□ -1.41
LDLRP01130 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC6.22□□□□□ -1.41
LDLRP01130 MEF2AP1-201ENST00000454867 863 ntBASIC6.22□□□□□ -1.41
LDLRP01130 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC6.22□□□□□ -1.41
LDLRP01130 AKR1D1P1-201ENST00000457236 936 ntBASIC6.22□□□□□ -1.41
LDLRP01130 NMNAT1P3-201ENST00000457517 888 ntBASIC6.22□□□□□ -1.41
LDLRP01130 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC6.22□□□□□ -1.41
LDLRP01130 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC6.22□□□□□ -1.41
LDLRP01130 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
LDLRP01130 AC093895.1-201ENST00000506480 821 ntTSL 3 BASIC6.22□□□□□ -1.41
LDLRP01130 AC010442.1-201ENST00000515583 816 ntBASIC6.22□□□□□ -1.41
LDLRP01130 RNA5SP318-201ENST00000516352 92 ntBASIC6.22□□□□□ -1.41
LDLRP01130 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC6.22□□□□□ -1.41
LDLRP01130 AC008676.3-201ENST00000521237 435 ntBASIC6.22□□□□□ -1.41
LDLRP01130 AC084337.1-201ENST00000524809 686 ntBASIC6.22□□□□□ -1.41
LDLRP01130 GTF2IP11-201ENST00000526931 420 ntBASIC6.22□□□□□ -1.41
LDLRP01130 AC006512.2-201ENST00000543250 486 ntBASIC6.22□□□□□ -1.41
LDLRP01130 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC6.22□□□□□ -1.41
LDLRP01130 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC6.22□□□□□ -1.41
LDLRP01130 AC009269.5-201ENST00000557800 755 ntTSL 3 BASIC6.22□□□□□ -1.41
LDLRP01130 AC037479.1-201ENST00000558361 625 ntBASIC6.22□□□□□ -1.41
LDLRP01130 AC011120.1-201ENST00000583916 624 ntTSL 5 BASIC6.22□□□□□ -1.41
LDLRP01130 AL136084.2-222ENST00000589105 885 ntTSL 5 BASIC6.22□□□□□ -1.41
LDLRP01130 ZNF569-205ENST00000589833 762 ntTSL 3 BASIC6.22□□□□□ -1.41
LDLRP01130 AC006305.3-201ENST00000590589 454 ntTSL 2 BASIC6.22□□□□□ -1.41
LDLRP01130 AC073539.3-201ENST00000601905 386 ntTSL 3 BASIC6.22□□□□□ -1.41
LDLRP01130 AC010531.5-201ENST00000602779 450 ntTSL 3 BASIC6.22□□□□□ -1.41
LDLRP01130 DIMT1P1-201ENST00000603970 763 ntBASIC6.22□□□□□ -1.41
LDLRP01130 AC025171.4-201ENST00000607250 1047 ntBASIC6.22□□□□□ -1.41
LDLRP01130 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC6.22□□□□□ -1.41
LDLRP01130 AL157762.1-201ENST00000619612 415 ntBASIC6.22□□□□□ -1.41
LDLRP01130 PSMB2-202ENST00000621781 4217 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
LDLRP01130 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
LDLRP01130 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC6.22□□□□□ -1.41
LDLRP01130 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC6.22□□□□□ -1.41
LDLRP01130 TTTY4B-201ENST00000420149 1346 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 112.1 ms