Protein–RNA interactions for Protein: Q9BYV2

TRIM54, Tripartite motif-containing protein 54, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54Q9BYV2 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
TRIM54Q9BYV2 NCALD-201ENST00000220931 3283 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
TRIM54Q9BYV2 HRG-201ENST00000232003 2015 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
TRIM54Q9BYV2 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC6.55□□□□□ -1.36
TRIM54Q9BYV2 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
TRIM54Q9BYV2 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
TRIM54Q9BYV2 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC6.55□□□□□ -1.36
TRIM54Q9BYV2 MS4A6A-213ENST00000530839 1383 ntAPPRIS P1 TSL 2 BASIC6.55□□□□□ -1.36
TRIM54Q9BYV2 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
TRIM54Q9BYV2 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC6.55□□□□□ -1.36
TRIM54Q9BYV2 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC6.55□□□□□ -1.36
TRIM54Q9BYV2 LRRC37A3-203ENST00000339474 2589 ntTSL 2 BASIC6.55□□□□□ -1.36
TRIM54Q9BYV2 FAM161A-202ENST00000404929 3762 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
TRIM54Q9BYV2 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC6.54□□□□□ -1.36
TRIM54Q9BYV2 ZNF600-201ENST00000338230 3829 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
TRIM54Q9BYV2 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
TRIM54Q9BYV2 PKIA-AS1-202ENST00000522302 2011 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
TRIM54Q9BYV2 ZNF101P1-201ENST00000435701 1720 ntBASIC6.54□□□□□ -1.36
TRIM54Q9BYV2 HSPD1P1-201ENST00000503199 1726 ntBASIC6.54□□□□□ -1.36
TRIM54Q9BYV2 AL731556.1-201ENST00000394628 3711 ntBASIC6.54□□□□□ -1.36
TRIM54Q9BYV2 AC022306.1-201ENST00000560489 1562 ntBASIC6.54□□□□□ -1.36
TRIM54Q9BYV2 AC092701.1-201ENST00000623627 1551 ntBASIC6.54□□□□□ -1.36
TRIM54Q9BYV2 RPTN-201ENST00000316073 3569 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
TRIM54Q9BYV2 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC6.54□□□□□ -1.36
TRIM54Q9BYV2 VDAC2-214ENST00000543351 1424 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
TRIM54Q9BYV2 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
TRIM54Q9BYV2 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
TRIM54Q9BYV2 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
TRIM54Q9BYV2 KRTAP19-6-201ENST00000334046 330 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
TRIM54Q9BYV2 RN7SKP130-201ENST00000364924 301 ntBASIC6.54□□□□□ -1.36
TRIM54Q9BYV2 RNU6-316P-201ENST00000391027 107 ntBASIC6.54□□□□□ -1.36
TRIM54Q9BYV2 CD200R1L-201ENST00000398214 1296 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
TRIM54Q9BYV2 AL079341.1-201ENST00000404701 1207 ntBASIC6.54□□□□□ -1.36
TRIM54Q9BYV2 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
TRIM54Q9BYV2 AL353651.1-201ENST00000415629 355 ntTSL 5 BASIC6.54□□□□□ -1.36
TRIM54Q9BYV2 AC007879.3-201ENST00000417096 556 ntTSL 4 BASIC6.54□□□□□ -1.36
TRIM54Q9BYV2 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC6.54□□□□□ -1.36
TRIM54Q9BYV2 PQLC2L-202ENST00000426338 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
TRIM54Q9BYV2 ELOCP3-201ENST00000439303 348 ntBASIC6.54□□□□□ -1.36
TRIM54Q9BYV2 RPS10P14-201ENST00000440748 502 ntBASIC6.54□□□□□ -1.36
TRIM54Q9BYV2 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC6.54□□□□□ -1.36
TRIM54Q9BYV2 AL392046.1-201ENST00000450742 569 ntTSL 5 BASIC6.54□□□□□ -1.36
TRIM54Q9BYV2 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC6.54□□□□□ -1.36
TRIM54Q9BYV2 RBMY2EP-202ENST00000456360 940 ntBASIC6.54□□□□□ -1.36
TRIM54Q9BYV2 SULT1D1P-201ENST00000458020 882 ntBASIC6.54□□□□□ -1.36
TRIM54Q9BYV2 FCRL2-205ENST00000469986 902 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
TRIM54Q9BYV2 RPL5P12-201ENST00000477071 851 ntBASIC6.54□□□□□ -1.36
TRIM54Q9BYV2 RPL7AP30-201ENST00000482859 796 ntBASIC6.54□□□□□ -1.36
TRIM54Q9BYV2 AC022126.1-201ENST00000502995 593 ntTSL 4 BASIC6.54□□□□□ -1.36
TRIM54Q9BYV2 AC097451.1-201ENST00000507388 653 ntTSL 3 BASIC6.54□□□□□ -1.36
TRIM54Q9BYV2 AC083906.1-201ENST00000509298 406 ntBASIC6.54□□□□□ -1.36
TRIM54Q9BYV2 RNU6-415P-201ENST00000516252 97 ntBASIC6.54□□□□□ -1.36
TRIM54Q9BYV2 SNORA76.2-201ENST00000517095 137 ntBASIC6.54□□□□□ -1.36
TRIM54Q9BYV2 AP000426.1-201ENST00000518749 361 ntTSL 3 BASIC6.54□□□□□ -1.36
TRIM54Q9BYV2 AC138701.1-201ENST00000524329 714 ntBASIC6.54□□□□□ -1.36
TRIM54Q9BYV2 OSBPL9P3-201ENST00000534523 595 ntBASIC6.54□□□□□ -1.36
TRIM54Q9BYV2 LRTOMT-217ENST00000539587 428 ntTSL 2 BASIC6.54□□□□□ -1.36
TRIM54Q9BYV2 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC6.54□□□□□ -1.36
TRIM54Q9BYV2 AC010287.1-201ENST00000566916 357 ntBASIC6.54□□□□□ -1.36
TRIM54Q9BYV2 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC6.54□□□□□ -1.36
TRIM54Q9BYV2 AC010761.3-201ENST00000578819 499 ntTSL 3 BASIC6.54□□□□□ -1.36
TRIM54Q9BYV2 CCL2-202ENST00000580907 736 ntTSL 2 BASIC6.54□□□□□ -1.36
TRIM54Q9BYV2 AC098847.2-201ENST00000588088 528 ntTSL 5 BASIC6.54□□□□□ -1.36
TRIM54Q9BYV2 CT45A3-202ENST00000598716 855 ntAPPRIS P1 TSL 3 BASIC6.54□□□□□ -1.36
TRIM54Q9BYV2 AL953862.2-201ENST00000603089 820 ntBASIC6.54□□□□□ -1.36
TRIM54Q9BYV2 AC026979.4-201ENST00000606555 645 ntBASIC6.54□□□□□ -1.36
TRIM54Q9BYV2 AC034229.4-201ENST00000607861 441 ntBASIC6.54□□□□□ -1.36
TRIM54Q9BYV2 MIR8082-201ENST00000612488 81 ntBASIC6.54□□□□□ -1.36
TRIM54Q9BYV2 Xist_exon4.1-201ENST00000615964 126 ntBASIC6.54□□□□□ -1.36
TRIM54Q9BYV2 AC090772.4-201ENST00000623599 362 ntBASIC6.54□□□□□ -1.36
TRIM54Q9BYV2 TDRD1-201ENST00000251864 4510 ntAPPRIS P2 TSL 1 (best) BASIC6.54□□□□□ -1.36
TRIM54Q9BYV2 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
TRIM54Q9BYV2 AC006600.2-201ENST00000624834 2506 ntBASIC6.54□□□□□ -1.36
TRIM54Q9BYV2 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC6.54□□□□□ -1.36
TRIM54Q9BYV2 ZNF763-202ENST00000358987 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
TRIM54Q9BYV2 AC243772.3-201ENST00000617878 1537 ntTSL 5 BASIC6.54□□□□□ -1.36
TRIM54Q9BYV2 AC005261.6-201ENST00000623072 1387 ntBASIC6.54□□□□□ -1.36
TRIM54Q9BYV2 DTNA-221ENST00000591182 1787 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
TRIM54Q9BYV2 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
TRIM54Q9BYV2 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
TRIM54Q9BYV2 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
TRIM54Q9BYV2 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC6.54□□□□□ -1.36
TRIM54Q9BYV2 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
TRIM54Q9BYV2 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
TRIM54Q9BYV2 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC6.53□□□□□ -1.36
TRIM54Q9BYV2 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
TRIM54Q9BYV2 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
TRIM54Q9BYV2 SNORA38B-201ENST00000363524 131 ntBASIC6.53□□□□□ -1.36
TRIM54Q9BYV2 NOX1-203ENST00000372964 661 ntTSL 2 BASIC6.53□□□□□ -1.36
TRIM54Q9BYV2 AL035405.1-201ENST00000400795 710 ntBASIC6.53□□□□□ -1.36
TRIM54Q9BYV2 AL139100.1-201ENST00000408001 498 ntBASIC6.53□□□□□ -1.36
TRIM54Q9BYV2 AC017035.1-201ENST00000411999 1115 ntBASIC6.53□□□□□ -1.36
TRIM54Q9BYV2 YWHAZP5-201ENST00000419975 730 ntBASIC6.53□□□□□ -1.36
TRIM54Q9BYV2 RPL6-202ENST00000424576 1074 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
TRIM54Q9BYV2 AL139415.1-201ENST00000424862 352 ntBASIC6.53□□□□□ -1.36
TRIM54Q9BYV2 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC6.53□□□□□ -1.36
TRIM54Q9BYV2 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC6.53□□□□□ -1.36
TRIM54Q9BYV2 ETF1P1-206ENST00000427296 984 ntBASIC6.53□□□□□ -1.36
TRIM54Q9BYV2 Z68868.1-201ENST00000429048 544 ntBASIC6.53□□□□□ -1.36
TRIM54Q9BYV2 AC016766.1-201ENST00000429636 714 ntTSL 3 BASIC6.53□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 69.9 ms