Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC6.55□□□□□ -1.36
HMGB4Q8WW32 AC131392.1-201ENST00000506490 633 ntBASIC6.55□□□□□ -1.36
HMGB4Q8WW32 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC6.55□□□□□ -1.36
HMGB4Q8WW32 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC6.55□□□□□ -1.36
HMGB4Q8WW32 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC6.55□□□□□ -1.36
HMGB4Q8WW32 LECT2-203ENST00000512872 762 ntTSL 5 BASIC6.55□□□□□ -1.36
HMGB4Q8WW32 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC6.55□□□□□ -1.36
HMGB4Q8WW32 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC6.55□□□□□ -1.36
HMGB4Q8WW32 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC6.55□□□□□ -1.36
HMGB4Q8WW32 MED21-206ENST00000546323 575 ntTSL 3 BASIC6.55□□□□□ -1.36
HMGB4Q8WW32 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC6.55□□□□□ -1.36
HMGB4Q8WW32 AC090826.1-203ENST00000569235 490 ntBASIC6.55□□□□□ -1.36
HMGB4Q8WW32 AC015923.1-202ENST00000581421 491 ntTSL 2 BASIC6.55□□□□□ -1.36
HMGB4Q8WW32 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC6.55□□□□□ -1.36
HMGB4Q8WW32 MIR6862-1-201ENST00000613016 70 ntBASIC6.55□□□□□ -1.36
HMGB4Q8WW32 MIR6862-2-201ENST00000614755 70 ntBASIC6.55□□□□□ -1.36
HMGB4Q8WW32 LINC00836-201ENST00000625325 582 ntTSL 4 BASIC6.55□□□□□ -1.36
HMGB4Q8WW32 TTN-AS1-268ENST00000629094 604 ntTSL 5 BASIC6.55□□□□□ -1.36
HMGB4Q8WW32 LINC01440-210ENST00000629744 541 ntTSL 5 BASIC6.55□□□□□ -1.36
HMGB4Q8WW32 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
HMGB4Q8WW32 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
HMGB4Q8WW32 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC6.55□□□□□ -1.36
HMGB4Q8WW32 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
HMGB4Q8WW32 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC6.55□□□□□ -1.36
HMGB4Q8WW32 AC024341.1-201ENST00000526444 1552 ntBASIC6.55□□□□□ -1.36
HMGB4Q8WW32 SCRN1-202ENST00000409497 1732 ntAPPRIS P1 TSL 2 BASIC6.55□□□□□ -1.36
HMGB4Q8WW32 PDE4B-207ENST00000480109 2037 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
HMGB4Q8WW32 ATP1A1-203ENST00000369496 3572 ntTSL 2 BASIC6.55□□□□□ -1.36
HMGB4Q8WW32 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC6.55□□□□□ -1.36
HMGB4Q8WW32 HERC4-211ENST00000492996 3385 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
HMGB4Q8WW32 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC6.55□□□□□ -1.36
HMGB4Q8WW32 AL391262.1-201ENST00000556558 1992 ntBASIC6.55□□□□□ -1.36
HMGB4Q8WW32 EXPH5-203ENST00000525344 6542 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
HMGB4Q8WW32 CSDE1-204ENST00000369530 3774 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
HMGB4Q8WW32 TAOK1-202ENST00000536202 4068 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
HMGB4Q8WW32 L3MBTL3-201ENST00000361794 4217 ntAPPRIS P4 TSL 5 BASIC6.55□□□□□ -1.36
HMGB4Q8WW32 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC6.54□□□□□ -1.36
HMGB4Q8WW32 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC6.54□□□□□ -1.36
HMGB4Q8WW32 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC6.54□□□□□ -1.36
HMGB4Q8WW32 ARMCX5-202ENST00000372742 2647 ntAPPRIS P1 TSL 2 BASIC6.54□□□□□ -1.36
HMGB4Q8WW32 AC010328.1-201ENST00000596769 4060 ntTSL 2 BASIC6.54□□□□□ -1.36
HMGB4Q8WW32 AC106038.1-201ENST00000501194 3473 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
HMGB4Q8WW32 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC6.54□□□□□ -1.36
HMGB4Q8WW32 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
HMGB4Q8WW32 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
HMGB4Q8WW32 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
HMGB4Q8WW32 RFPL3S-201ENST00000382084 1117 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
HMGB4Q8WW32 AC004386.1-201ENST00000393214 761 ntBASIC6.54□□□□□ -1.36
HMGB4Q8WW32 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC6.54□□□□□ -1.36
HMGB4Q8WW32 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC6.54□□□□□ -1.36
HMGB4Q8WW32 DHFRP2-201ENST00000414224 547 ntBASIC6.54□□□□□ -1.36
HMGB4Q8WW32 RPL12P43-201ENST00000420608 499 ntBASIC6.54□□□□□ -1.36
HMGB4Q8WW32 GNRHR-202ENST00000420975 859 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
HMGB4Q8WW32 NFIA-AS2-202ENST00000421455 768 ntTSL 4 BASIC6.54□□□□□ -1.36
HMGB4Q8WW32 AL606534.4-201ENST00000427176 792 ntTSL 5 BASIC6.54□□□□□ -1.36
HMGB4Q8WW32 EMC3-AS1-205ENST00000438698 534 ntBASIC6.54□□□□□ -1.36
HMGB4Q8WW32 AC002486.2-201ENST00000447806 590 ntBASIC6.54□□□□□ -1.36
HMGB4Q8WW32 GAPDHP16-201ENST00000448152 962 ntBASIC6.54□□□□□ -1.36
HMGB4Q8WW32 AC105389.1-201ENST00000510602 561 ntTSL 4 BASIC6.54□□□□□ -1.36
HMGB4Q8WW32 AC020980.1-201ENST00000513041 458 ntTSL 5 BASIC6.54□□□□□ -1.36
HMGB4Q8WW32 OR8K2P-201ENST00000524645 927 ntBASIC6.54□□□□□ -1.36
HMGB4Q8WW32 HTR2A-203ENST00000543956 4689 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
HMGB4Q8WW32 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
HMGB4Q8WW32 AL591767.3-201ENST00000554632 525 ntBASIC6.54□□□□□ -1.36
HMGB4Q8WW32 AC087721.1-201ENST00000559959 476 ntTSL 5 BASIC6.54□□□□□ -1.36
HMGB4Q8WW32 AC106785.4-201ENST00000569492 412 ntBASIC6.54□□□□□ -1.36
HMGB4Q8WW32 SNORA70D-201ENST00000578836 135 ntBASIC6.54□□□□□ -1.36
HMGB4Q8WW32 ADAD1P2-201ENST00000588476 646 ntBASIC6.54□□□□□ -1.36
HMGB4Q8WW32 AC067773.1-201ENST00000603284 1094 ntBASIC6.54□□□□□ -1.36
HMGB4Q8WW32 AL356986.1-201ENST00000604085 341 ntBASIC6.54□□□□□ -1.36
HMGB4Q8WW32 MIR6729-201ENST00000618194 65 ntBASIC6.54□□□□□ -1.36
HMGB4Q8WW32 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
HMGB4Q8WW32 UOX-205ENST00000640983 544 ntTSL 4 BASIC6.54□□□□□ -1.36
HMGB4Q8WW32 MITF-206ENST00000394351 1956 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
HMGB4Q8WW32 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
HMGB4Q8WW32 KIAA0040-206ENST00000619513 4340 ntTSL 2 BASIC6.54□□□□□ -1.36
HMGB4Q8WW32 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
HMGB4Q8WW32 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC6.54□□□□□ -1.36
HMGB4Q8WW32 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
HMGB4Q8WW32 PRRC1-204ENST00000512635 2726 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
HMGB4Q8WW32 STIL-203ENST00000371877 5009 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
HMGB4Q8WW32 PAICS-208ENST00000514888 3340 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
HMGB4Q8WW32 LINC01903-201ENST00000580659 2149 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
HMGB4Q8WW32 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC6.53□□□□□ -1.36
HMGB4Q8WW32 NAV3-202ENST00000536525 7386 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
HMGB4Q8WW32 ADAL-201ENST00000389651 1559 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
HMGB4Q8WW32 FKBP5-202ENST00000536438 3940 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
HMGB4Q8WW32 CAGE1-203ENST00000379918 2877 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
HMGB4Q8WW32 LIN7C-202ENST00000524596 4290 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
HMGB4Q8WW32 NBPF9-205ENST00000613595 4527 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
HMGB4Q8WW32 COX6B1P3-201ENST00000312310 260 ntBASIC6.53□□□□□ -1.36
HMGB4Q8WW32 RNU6-883P-201ENST00000384597 107 ntBASIC6.53□□□□□ -1.36
HMGB4Q8WW32 AL139805.1-201ENST00000407837 289 ntBASIC6.53□□□□□ -1.36
HMGB4Q8WW32 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC6.53□□□□□ -1.36
HMGB4Q8WW32 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
HMGB4Q8WW32 AJ239321.1-201ENST00000424255 564 ntBASIC6.53□□□□□ -1.36
HMGB4Q8WW32 CR848007.2-201ENST00000424918 787 ntBASIC6.53□□□□□ -1.36
HMGB4Q8WW32 RPS29P14-201ENST00000431518 171 ntBASIC6.53□□□□□ -1.36
HMGB4Q8WW32 BX119917.1-201ENST00000432517 502 ntBASIC6.53□□□□□ -1.36
HMGB4Q8WW32 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC6.53□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 84.5 ms