Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 AC093278.2-201ENST00000564956 2485 ntBASIC6.17□□□□□ -1.42
SUMO3P55854 LINC01772-201ENST00000457898 3245 ntTSL 2 BASIC6.17□□□□□ -1.42
SUMO3P55854 LINC00598-211ENST00000636621 3241 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
SUMO3P55854 PIK3C3-202ENST00000398870 9206 ntTSL 2 BASIC6.17□□□□□ -1.42
SUMO3P55854 NUSAP1-202ENST00000414849 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
SUMO3P55854 OSGEPL1-207ENST00000522700 1779 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
SUMO3P55854 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
SUMO3P55854 OR1I1-201ENST00000209540 1242 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
SUMO3P55854 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC6.17□□□□□ -1.42
SUMO3P55854 LALBA-201ENST00000301046 728 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
SUMO3P55854 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
SUMO3P55854 MIR138-2-201ENST00000384916 84 ntBASIC6.17□□□□□ -1.42
SUMO3P55854 MIR431-201ENST00000385266 114 ntBASIC6.17□□□□□ -1.42
SUMO3P55854 TRAV19-201ENST00000390447 467 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
SUMO3P55854 ZNF37CP-201ENST00000406795 241 ntBASIC6.17□□□□□ -1.42
SUMO3P55854 VN1R51P-201ENST00000411675 945 ntBASIC6.17□□□□□ -1.42
SUMO3P55854 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC6.17□□□□□ -1.42
SUMO3P55854 AL353651.1-201ENST00000415629 355 ntTSL 5 BASIC6.17□□□□□ -1.42
SUMO3P55854 AC118754.1-201ENST00000416958 370 ntTSL 3 BASIC6.17□□□□□ -1.42
SUMO3P55854 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
SUMO3P55854 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC6.17□□□□□ -1.42
SUMO3P55854 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC6.17□□□□□ -1.42
SUMO3P55854 AC009303.1-201ENST00000426307 352 ntBASIC6.17□□□□□ -1.42
SUMO3P55854 AC239367.3-201ENST00000428996 814 ntBASIC6.17□□□□□ -1.42
SUMO3P55854 NDUFB3-202ENST00000433898 503 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
SUMO3P55854 RPL3P11-201ENST00000434028 1146 ntBASIC6.17□□□□□ -1.42
SUMO3P55854 NFIA-AS2-203ENST00000438559 1275 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
SUMO3P55854 AL451164.3-201ENST00000441377 447 ntTSL 5 BASIC6.17□□□□□ -1.42
SUMO3P55854 AC114752.1-201ENST00000448204 289 ntTSL 3 BASIC6.17□□□□□ -1.42
SUMO3P55854 CYCSP20-201ENST00000473154 315 ntBASIC6.17□□□□□ -1.42
SUMO3P55854 RBBP4P1-201ENST00000502424 1276 ntBASIC6.17□□□□□ -1.42
SUMO3P55854 C5orf58-205ENST00000524171 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
SUMO3P55854 AP003066.2-201ENST00000529375 555 ntBASIC6.17□□□□□ -1.42
SUMO3P55854 SLC25A51P2-201ENST00000535708 889 ntBASIC6.17□□□□□ -1.42
SUMO3P55854 AGGF1P9-201ENST00000561884 913 ntBASIC6.17□□□□□ -1.42
SUMO3P55854 MIR4312-201ENST00000579909 76 ntBASIC6.17□□□□□ -1.42
SUMO3P55854 RN7SL339P-201ENST00000580597 296 ntBASIC6.17□□□□□ -1.42
SUMO3P55854 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC6.17□□□□□ -1.42
SUMO3P55854 AL512605.1-201ENST00000588215 1263 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
SUMO3P55854 AC008764.3-201ENST00000597357 432 ntTSL 5 BASIC6.17□□□□□ -1.42
SUMO3P55854 AC091057.3-201ENST00000602684 733 ntBASIC6.17□□□□□ -1.42
SUMO3P55854 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC6.17□□□□□ -1.42
SUMO3P55854 FP325318.1-201ENST00000616097 1263 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
SUMO3P55854 SNORA16A-202ENST00000628458 135 ntBASIC6.17□□□□□ -1.42
SUMO3P55854 ZBTB8B-201ENST00000609129 12834 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
SUMO3P55854 EYA3-204ENST00000436342 5943 ntTSL 2 BASIC6.17□□□□□ -1.42
SUMO3P55854 DYDC2-201ENST00000256039 1842 ntAPPRIS P3 TSL 2 BASIC6.17□□□□□ -1.42
SUMO3P55854 EXPH5-203ENST00000525344 6542 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
SUMO3P55854 OR8B8-202ENST00000642064 3914 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
SUMO3P55854 SLC14A1-201ENST00000321925 3971 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
SUMO3P55854 NEK2P4-201ENST00000425793 1329 ntBASIC6.17□□□□□ -1.42
SUMO3P55854 AL512310.3-201ENST00000547023 1335 ntBASIC6.17□□□□□ -1.42
SUMO3P55854 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
SUMO3P55854 ZNF559-ZNF177-203ENST00000541595 2435 ntAPPRIS P3 TSL 2 BASIC6.17□□□□□ -1.42
SUMO3P55854 PLCH1-206ENST00000494598 3525 ntTSL 5 BASIC6.17□□□□□ -1.42
SUMO3P55854 ZNF652-201ENST00000362063 5988 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
SUMO3P55854 IKZF3-215ENST00000535189 1996 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
SUMO3P55854 CXCR6-204ENST00000458629 2805 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
SUMO3P55854 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
SUMO3P55854 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
SUMO3P55854 ZNF571-205ENST00000590751 1700 ntTSL 2 BASIC6.16□□□□□ -1.42
SUMO3P55854 ZNF268-209ENST00000541009 3773 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
SUMO3P55854 AL117339.4-201ENST00000608335 7063 ntBASIC6.16□□□□□ -1.42
SUMO3P55854 SLC2A3P4-201ENST00000521259 1471 ntBASIC6.16□□□□□ -1.42
SUMO3P55854 ERICH3-202ENST00000420661 2068 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
SUMO3P55854 PROM1-219ENST00000539194 3884 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
SUMO3P55854 KCNJ15-220ENST00000612702 3046 ntAPPRIS P1 TSL 4 BASIC6.16□□□□□ -1.42
SUMO3P55854 LRFN5-203ENST00000554120 2121 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
SUMO3P55854 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC6.16□□□□□ -1.42
SUMO3P55854 SRBD1-201ENST00000263736 3681 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
SUMO3P55854 NFATC3-201ENST00000329524 6144 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
SUMO3P55854 CLCA3P-203ENST00000490028 2781 ntBASIC6.16□□□□□ -1.42
SUMO3P55854 MEF2C-217ENST00000510942 3446 ntTSL 5 BASIC6.16□□□□□ -1.42
SUMO3P55854 NOX4-211ENST00000528341 1899 ntTSL 2 BASIC6.16□□□□□ -1.42
SUMO3P55854 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
SUMO3P55854 ZRANB3-210ENST00000536680 6943 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
SUMO3P55854 MAML2-202ENST00000618849 3154 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
SUMO3P55854 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC6.16□□□□□ -1.42
SUMO3P55854 IFNK-201ENST00000276943 1140 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
SUMO3P55854 TAS2R42-201ENST00000334266 945 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
SUMO3P55854 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
SUMO3P55854 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
SUMO3P55854 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
SUMO3P55854 RNU6-252P-201ENST00000363232 107 ntBASIC6.16□□□□□ -1.42
SUMO3P55854 RNA5SP152-201ENST00000365184 110 ntBASIC6.16□□□□□ -1.42
SUMO3P55854 AL672167.2-201ENST00000377164 879 ntBASIC6.16□□□□□ -1.42
SUMO3P55854 AP000812.1-201ENST00000378140 477 ntTSL 3 BASIC6.16□□□□□ -1.42
SUMO3P55854 NQO1-202ENST00000379046 1105 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
SUMO3P55854 UBBP1-201ENST00000392399 473 ntBASIC6.16□□□□□ -1.42
SUMO3P55854 AL136100.1-201ENST00000407696 330 ntBASIC6.16□□□□□ -1.42
SUMO3P55854 NR1I3-208ENST00000412844 989 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
SUMO3P55854 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC6.16□□□□□ -1.42
SUMO3P55854 MEAF6P1-201ENST00000416092 327 ntBASIC6.16□□□□□ -1.42
SUMO3P55854 AC073310.1-201ENST00000423226 1033 ntBASIC6.16□□□□□ -1.42
SUMO3P55854 AHCYP8-201ENST00000425108 209 ntBASIC6.16□□□□□ -1.42
SUMO3P55854 AC092646.1-201ENST00000427142 901 ntBASIC6.16□□□□□ -1.42
SUMO3P55854 AL590128.1-201ENST00000433407 286 ntBASIC6.16□□□□□ -1.42
SUMO3P55854 SNRPBP1-201ENST00000443634 282 ntBASIC6.16□□□□□ -1.42
SUMO3P55854 RPL6P5-201ENST00000445678 828 ntBASIC6.16□□□□□ -1.42
SUMO3P55854 LRRC28-203ENST00000447360 1235 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms