Protein–RNA interactions for Protein: P55318

FOXA3, Hepatocyte nuclear factor 3-gamma, humanhuman

Predicted RBP Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA3P55318 LIX1L-AS1-207ENST00000448561 347 ntTSL 3 BASIC4.62□□□□□ -1.67
FOXA3P55318 AL133480.2-201ENST00000456723 487 ntBASIC4.62□□□□□ -1.67
FOXA3P55318 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC4.62□□□□□ -1.67
FOXA3P55318 TMEM196-205ENST00000493519 687 ntTSL 5 BASIC4.62□□□□□ -1.67
FOXA3P55318 MTERF4-220ENST00000495694 909 ntTSL 5 BASIC4.62□□□□□ -1.67
FOXA3P55318 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
FOXA3P55318 TOMM22P4-201ENST00000511318 336 ntBASIC4.62□□□□□ -1.67
FOXA3P55318 AC105345.2-201ENST00000515186 664 ntTSL 3 BASIC4.62□□□□□ -1.67
FOXA3P55318 IGKV2D-38-201ENST00000518423 240 ntBASIC4.62□□□□□ -1.67
FOXA3P55318 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC4.62□□□□□ -1.67
FOXA3P55318 AP002498.1-201ENST00000530190 568 ntTSL 3 BASIC4.62□□□□□ -1.67
FOXA3P55318 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC4.62□□□□□ -1.67
FOXA3P55318 AC069240.2-201ENST00000550242 609 ntBASIC4.62□□□□□ -1.67
FOXA3P55318 MIR1273F-201ENST00000580581 99 ntBASIC4.62□□□□□ -1.67
FOXA3P55318 AC018521.2-202ENST00000582142 473 ntTSL 2 BASIC4.62□□□□□ -1.67
FOXA3P55318 TEK-205ENST00000615002 4666 ntTSL 5 BASIC4.62□□□□□ -1.67
FOXA3P55318 MIR6085-201ENST00000618314 110 ntBASIC4.62□□□□□ -1.67
FOXA3P55318 TMEM55A-206ENST00000630164 171 ntTSL 5 BASIC4.62□□□□□ -1.67
FOXA3P55318 FKBP1AP4-201ENST00000631775 336 ntBASIC4.62□□□□□ -1.67
FOXA3P55318 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
FOXA3P55318 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC4.62□□□□□ -1.67
FOXA3P55318 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
FOXA3P55318 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC4.62□□□□□ -1.67
FOXA3P55318 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC4.62□□□□□ -1.67
FOXA3P55318 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
FOXA3P55318 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
FOXA3P55318 AL353743.3-201ENST00000442109 1468 ntBASIC4.62□□□□□ -1.67
FOXA3P55318 MAK-205ENST00000538030 2459 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
FOXA3P55318 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC4.62□□□□□ -1.67
FOXA3P55318 GIF-201ENST00000257248 1518 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
FOXA3P55318 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
FOXA3P55318 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC4.61□□□□□ -1.67
FOXA3P55318 AC012078.1-201ENST00000405035 1646 ntBASIC4.61□□□□□ -1.67
FOXA3P55318 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC4.61□□□□□ -1.67
FOXA3P55318 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC4.61□□□□□ -1.67
FOXA3P55318 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC4.61□□□□□ -1.67
FOXA3P55318 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
FOXA3P55318 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
FOXA3P55318 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
FOXA3P55318 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
FOXA3P55318 AL034546.1-201ENST00000623740 3693 ntBASIC4.61□□□□□ -1.67
FOXA3P55318 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
FOXA3P55318 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
FOXA3P55318 OR13F1-201ENST00000334726 960 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
FOXA3P55318 WFDC10B-202ENST00000335769 475 ntAPPRIS P4 TSL 1 (best) BASIC4.61□□□□□ -1.67
FOXA3P55318 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC4.61□□□□□ -1.67
FOXA3P55318 RPL7-201ENST00000352983 1101 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
FOXA3P55318 SNORD16-201ENST00000362803 99 ntBASIC4.61□□□□□ -1.67
FOXA3P55318 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC4.61□□□□□ -1.67
FOXA3P55318 MIR128-2-201ENST00000384893 84 ntBASIC4.61□□□□□ -1.67
FOXA3P55318 AC245036.1-201ENST00000391727 309 ntBASIC4.61□□□□□ -1.67
FOXA3P55318 OR2H1-204ENST00000396792 1294 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
FOXA3P55318 AL445238.1-204ENST00000400311 463 ntBASIC4.61□□□□□ -1.67
FOXA3P55318 SNORA77.2-201ENST00000408571 112 ntBASIC4.61□□□□□ -1.67
FOXA3P55318 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC4.61□□□□□ -1.67
FOXA3P55318 AC073115.2-201ENST00000416708 555 ntTSL 4 BASIC4.61□□□□□ -1.67
FOXA3P55318 AC114402.2-201ENST00000432760 643 ntBASIC4.61□□□□□ -1.67
FOXA3P55318 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC4.61□□□□□ -1.67
FOXA3P55318 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC4.61□□□□□ -1.67
FOXA3P55318 PRKAR1AP1-201ENST00000441422 1162 ntBASIC4.61□□□□□ -1.67
FOXA3P55318 AC093581.1-204ENST00000442606 390 ntTSL 3 BASIC4.61□□□□□ -1.67
FOXA3P55318 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC4.61□□□□□ -1.67
FOXA3P55318 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC4.61□□□□□ -1.67
FOXA3P55318 LINC01832-201ENST00000446520 553 ntTSL 4 BASIC4.61□□□□□ -1.67
FOXA3P55318 MORF4-201ENST00000447135 971 ntBASIC4.61□□□□□ -1.67
FOXA3P55318 AL162739.1-201ENST00000450606 307 ntBASIC4.61□□□□□ -1.67
FOXA3P55318 GCSAM-202ENST00000460387 623 ntTSL 3 BASIC4.61□□□□□ -1.67
FOXA3P55318 AC073594.1-201ENST00000462065 364 ntBASIC4.61□□□□□ -1.67
FOXA3P55318 AC126615.1-201ENST00000470084 630 ntBASIC4.61□□□□□ -1.67
FOXA3P55318 TUBBP11-201ENST00000472255 252 ntBASIC4.61□□□□□ -1.67
FOXA3P55318 RPL7AP56-201ENST00000476420 791 ntBASIC4.61□□□□□ -1.67
FOXA3P55318 PDCL3P4-201ENST00000489621 720 ntBASIC4.61□□□□□ -1.67
FOXA3P55318 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC4.61□□□□□ -1.67
FOXA3P55318 SNX24-205ENST00000506996 588 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
FOXA3P55318 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC4.61□□□□□ -1.67
FOXA3P55318 AC010442.1-201ENST00000515583 816 ntBASIC4.61□□□□□ -1.67
FOXA3P55318 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC4.61□□□□□ -1.67
FOXA3P55318 AC090709.1-201ENST00000548384 716 ntTSL 3 BASIC4.61□□□□□ -1.67
FOXA3P55318 APAF1-211ENST00000552268 1143 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
FOXA3P55318 AC021979.2-201ENST00000553644 209 ntTSL 5 BASIC4.61□□□□□ -1.67
FOXA3P55318 LINC02322-201ENST00000554773 338 ntTSL 2 BASIC4.61□□□□□ -1.67
FOXA3P55318 CIPC-206ENST00000555611 599 ntTSL 4 BASIC4.61□□□□□ -1.67
FOXA3P55318 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC4.61□□□□□ -1.67
FOXA3P55318 WDR45BP1-201ENST00000583470 1029 ntBASIC4.61□□□□□ -1.67
FOXA3P55318 AC027229.1-201ENST00000583887 253 ntBASIC4.61□□□□□ -1.67
FOXA3P55318 LINC01855-201ENST00000585520 396 ntTSL 3 BASIC4.61□□□□□ -1.67
FOXA3P55318 AC005495.1-201ENST00000586611 1211 ntBASIC4.61□□□□□ -1.67
FOXA3P55318 AC020916.2-201ENST00000591242 360 ntBASIC4.61□□□□□ -1.67
FOXA3P55318 AC012510.1-201ENST00000607946 759 ntBASIC4.61□□□□□ -1.67
FOXA3P55318 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC4.61□□□□□ -1.67
FOXA3P55318 AC099654.15-201ENST00000639802 509 ntBASIC4.61□□□□□ -1.67
FOXA3P55318 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
FOXA3P55318 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
FOXA3P55318 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC4.61□□□□□ -1.67
FOXA3P55318 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
FOXA3P55318 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
FOXA3P55318 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
FOXA3P55318 ADAM24P-201ENST00000398655 2101 ntBASIC4.61□□□□□ -1.67
FOXA3P55318 GVINP1-202ENST00000531871 7271 ntBASIC4.61□□□□□ -1.67
FOXA3P55318 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms