Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 KLRD1-203ENST00000350274 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.34
LHX1P48742 RNA5SP115-201ENST00000411160 107 ntBASIC6.65□□□□□ -1.34
LHX1P48742 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
LHX1P48742 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC6.65□□□□□ -1.34
LHX1P48742 PSMD10P2-201ENST00000432890 672 ntBASIC6.65□□□□□ -1.34
LHX1P48742 OR3D1P-201ENST00000438288 955 ntBASIC6.65□□□□□ -1.34
LHX1P48742 AL359644.1-204ENST00000440807 440 ntTSL 3 BASIC6.65□□□□□ -1.34
LHX1P48742 OR13K1P-201ENST00000444577 975 ntBASIC6.65□□□□□ -1.34
LHX1P48742 AC097463.1-201ENST00000447288 481 ntBASIC6.65□□□□□ -1.34
LHX1P48742 AC092967.1-201ENST00000449016 481 ntBASIC6.65□□□□□ -1.34
LHX1P48742 AC080162.1-201ENST00000480764 491 ntTSL 3 BASIC6.65□□□□□ -1.34
LHX1P48742 RN7SKP98-201ENST00000517070 156 ntBASIC6.65□□□□□ -1.34
LHX1P48742 AC016405.1-202ENST00000524348 758 ntTSL 3 BASIC6.65□□□□□ -1.34
LHX1P48742 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC6.65□□□□□ -1.34
LHX1P48742 FCF1-203ENST00000553615 954 ntTSL 3 BASIC6.65□□□□□ -1.34
LHX1P48742 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
LHX1P48742 AC067852.5-201ENST00000589299 310 ntBASIC6.65□□□□□ -1.34
LHX1P48742 FAM27E2-201ENST00000619668 403 ntBASIC6.65□□□□□ -1.34
LHX1P48742 AL450226.2-201ENST00000622913 439 ntBASIC6.65□□□□□ -1.34
LHX1P48742 OXSM-209ENST00000626005 309 ntTSL 3 BASIC6.65□□□□□ -1.34
LHX1P48742 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC6.65□□□□□ -1.34
LHX1P48742 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC6.65□□□□□ -1.34
LHX1P48742 AC001226.2-204ENST00000638101 2645 ntAPPRIS ALT2 TSL 5 BASIC6.65□□□□□ -1.34
LHX1P48742 TAF12-202ENST00000373824 1334 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
LHX1P48742 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC6.65□□□□□ -1.35
LHX1P48742 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC6.65□□□□□ -1.35
LHX1P48742 AL391261.1-201ENST00000555712 1479 ntBASIC6.65□□□□□ -1.35
LHX1P48742 ZCCHC6-204ENST00000375957 2262 ntTSL 2 BASIC6.65□□□□□ -1.35
LHX1P48742 TEK-204ENST00000519097 3836 ntTSL 2 BASIC6.65□□□□□ -1.35
LHX1P48742 L3MBTL3-201ENST00000361794 4217 ntAPPRIS P4 TSL 5 BASIC6.65□□□□□ -1.35
LHX1P48742 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
LHX1P48742 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
LHX1P48742 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC6.64□□□□□ -1.35
LHX1P48742 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
LHX1P48742 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
LHX1P48742 MLIP-206ENST00000502396 3102 ntAPPRIS ALT2 TSL 2 BASIC6.64□□□□□ -1.35
LHX1P48742 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
LHX1P48742 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC6.64□□□□□ -1.35
LHX1P48742 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC6.64□□□□□ -1.35
LHX1P48742 MIR433-201ENST00000384837 93 ntBASIC6.64□□□□□ -1.35
LHX1P48742 RAB5CP1-201ENST00000395972 580 ntBASIC6.64□□□□□ -1.35
LHX1P48742 ZNF705B-201ENST00000400120 1207 ntAPPRIS P1 TSL 2 BASIC6.64□□□□□ -1.35
LHX1P48742 AL445238.1-204ENST00000400311 463 ntBASIC6.64□□□□□ -1.35
LHX1P48742 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC6.64□□□□□ -1.35
LHX1P48742 AC009518.1-202ENST00000415393 1229 ntTSL 2 BASIC6.64□□□□□ -1.35
LHX1P48742 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
LHX1P48742 AL356476.1-201ENST00000421481 480 ntTSL 5 BASIC6.64□□□□□ -1.35
LHX1P48742 AC117394.1-201ENST00000477323 567 ntBASIC6.64□□□□□ -1.35
LHX1P48742 OR7E99P-201ENST00000505750 922 ntBASIC6.64□□□□□ -1.35
LHX1P48742 LINC02217-201ENST00000505844 687 ntTSL 2 BASIC6.64□□□□□ -1.35
LHX1P48742 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC6.64□□□□□ -1.35
LHX1P48742 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC6.64□□□□□ -1.35
LHX1P48742 BCAS2P1-201ENST00000528022 632 ntBASIC6.64□□□□□ -1.35
LHX1P48742 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC6.64□□□□□ -1.35
LHX1P48742 AC134669.1-201ENST00000581275 672 ntBASIC6.64□□□□□ -1.35
LHX1P48742 AP001542.1-201ENST00000591314 200 ntBASIC6.64□□□□□ -1.35
LHX1P48742 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC6.64□□□□□ -1.35
LHX1P48742 AC091193.1-201ENST00000604640 448 ntBASIC6.64□□□□□ -1.35
LHX1P48742 AL591167.1-201ENST00000607321 456 ntBASIC6.64□□□□□ -1.35
LHX1P48742 AP001437.1-201ENST00000608783 456 ntBASIC6.64□□□□□ -1.35
LHX1P48742 AC092681.3-201ENST00000609463 678 ntBASIC6.64□□□□□ -1.35
LHX1P48742 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC6.64□□□□□ -1.35
LHX1P48742 AL136359.1-201ENST00000625090 565 ntTSL 2 BASIC6.64□□□□□ -1.35
LHX1P48742 PSMD10P2-203ENST00000627340 914 ntTSL 5 BASIC6.64□□□□□ -1.35
LHX1P48742 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
LHX1P48742 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC6.64□□□□□ -1.35
LHX1P48742 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
LHX1P48742 LY86-AS1-202ENST00000435641 2819 ntTSL 2 BASIC6.64□□□□□ -1.35
LHX1P48742 KLHL5-205ENST00000508137 2926 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
LHX1P48742 BIN2P1-201ENST00000504996 1530 ntBASIC6.64□□□□□ -1.35
LHX1P48742 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
LHX1P48742 CDY10P-201ENST00000452415 1567 ntBASIC6.64□□□□□ -1.35
LHX1P48742 OXCT1-206ENST00000512084 1593 ntTSL 2 BASIC6.64□□□□□ -1.35
LHX1P48742 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
LHX1P48742 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC6.64□□□□□ -1.35
LHX1P48742 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC6.64□□□□□ -1.35
LHX1P48742 TCF4-225ENST00000564999 3590 ntAPPRIS P3 TSL 5 BASIC6.64□□□□□ -1.35
LHX1P48742 ZSCAN4-202ENST00000612521 1979 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
LHX1P48742 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC6.64□□□□□ -1.35
LHX1P48742 PABPC1P8-201ENST00000452851 2086 ntBASIC6.64□□□□□ -1.35
LHX1P48742 AC024651.2-201ENST00000562480 2098 ntBASIC6.64□□□□□ -1.35
LHX1P48742 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC6.64□□□□□ -1.35
LHX1P48742 METTL21EP-202ENST00000605100 2312 ntTSL 2 BASIC6.64□□□□□ -1.35
LHX1P48742 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
LHX1P48742 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
LHX1P48742 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC6.63□□□□□ -1.35
LHX1P48742 AP001636.3-201ENST00000533954 2810 ntTSL 2 BASIC6.63□□□□□ -1.35
LHX1P48742 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
LHX1P48742 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC6.63□□□□□ -1.35
LHX1P48742 TEAD1-201ENST00000334310 3075 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
LHX1P48742 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
LHX1P48742 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC6.63□□□□□ -1.35
LHX1P48742 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
LHX1P48742 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
LHX1P48742 OR11H13P-201ENST00000359695 979 ntBASIC6.63□□□□□ -1.35
LHX1P48742 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
LHX1P48742 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC6.63□□□□□ -1.35
LHX1P48742 RNU11-6P-201ENST00000391127 133 ntBASIC6.63□□□□□ -1.35
LHX1P48742 IFIT1P1-201ENST00000400497 1449 ntBASIC6.63□□□□□ -1.35
LHX1P48742 LINC01687-201ENST00000416327 795 ntTSL 3 BASIC6.63□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 84 ms