Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SOX2P48431 AL161931.1-201ENST00000612768 246 ntBASIC5.77□□□□□ -1.49
SOX2P48431 CXADRP3-202ENST00000617265 1100 ntBASIC5.77□□□□□ -1.49
SOX2P48431 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC5.77□□□□□ -1.49
SOX2P48431 BX005040.2-201ENST00000620504 370 ntBASIC5.77□□□□□ -1.49
SOX2P48431 AC008993.2-201ENST00000631744 806 ntBASIC5.77□□□□□ -1.49
SOX2P48431 HBG1-202ENST00000632727 369 ntTSL 3 BASIC5.77□□□□□ -1.49
SOX2P48431 LINC01646-202ENST00000634256 1107 ntTSL 5 BASIC5.77□□□□□ -1.49
SOX2P48431 AC024475.3-203ENST00000634971 854 ntTSL 5 BASIC5.77□□□□□ -1.49
SOX2P48431 AL355377.1-201ENST00000621125 1653 ntBASIC5.77□□□□□ -1.49
SOX2P48431 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC5.77□□□□□ -1.49
SOX2P48431 PSG2-202ENST00000406487 1538 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SOX2P48431 AC020658.2-201ENST00000559030 4020 ntBASIC5.77□□□□□ -1.49
SOX2P48431 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
SOX2P48431 NRP1-205ENST00000374823 3737 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SOX2P48431 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
SOX2P48431 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SOX2P48431 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC5.77□□□□□ -1.49
SOX2P48431 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
SOX2P48431 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
SOX2P48431 AC007278.1-201ENST00000450893 1327 ntTSL 3 BASIC5.76□□□□□ -1.49
SOX2P48431 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC5.76□□□□□ -1.49
SOX2P48431 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC5.76□□□□□ -1.49
SOX2P48431 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC5.76□□□□□ -1.49
SOX2P48431 CDKAL1-204ENST00000613575 1673 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
SOX2P48431 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC5.76□□□□□ -1.49
SOX2P48431 OR52D1-201ENST00000322641 1065 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
SOX2P48431 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
SOX2P48431 AL451142.1-201ENST00000375867 775 ntBASIC5.76□□□□□ -1.49
SOX2P48431 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC5.76□□□□□ -1.49
SOX2P48431 RNA5SP474-201ENST00000391234 90 ntBASIC5.76□□□□□ -1.49
SOX2P48431 AL023284.3-201ENST00000407767 334 ntBASIC5.76□□□□□ -1.49
SOX2P48431 RNA5SP115-201ENST00000411160 107 ntBASIC5.76□□□□□ -1.49
SOX2P48431 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC5.76□□□□□ -1.49
SOX2P48431 KCND3-AS1-201ENST00000419258 383 ntTSL 3 BASIC5.76□□□□□ -1.49
SOX2P48431 AC092570.3-201ENST00000420113 693 ntBASIC5.76□□□□□ -1.49
SOX2P48431 MTCO2P17-201ENST00000424336 677 ntBASIC5.76□□□□□ -1.49
SOX2P48431 AC073188.3-201ENST00000425228 339 ntTSL 2 BASIC5.76□□□□□ -1.49
SOX2P48431 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC5.76□□□□□ -1.49
SOX2P48431 AL512637.2-201ENST00000431287 1256 ntBASIC5.76□□□□□ -1.49
SOX2P48431 RPS21P1-201ENST00000434479 247 ntBASIC5.76□□□□□ -1.49
SOX2P48431 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC5.76□□□□□ -1.49
SOX2P48431 C5orf24-203ENST00000435259 851 ntAPPRIS P1 TSL 3 BASIC5.76□□□□□ -1.49
SOX2P48431 AP001469.2-201ENST00000444966 390 ntTSL 5 BASIC5.76□□□□□ -1.49
SOX2P48431 PFN1P11-201ENST00000445829 389 ntBASIC5.76□□□□□ -1.49
SOX2P48431 MOB1AP2-201ENST00000446060 614 ntBASIC5.76□□□□□ -1.49
SOX2P48431 ZNF197-AS1-201ENST00000447691 623 ntTSL 5 BASIC5.76□□□□□ -1.49
SOX2P48431 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
SOX2P48431 OFD1P3Y-201ENST00000453312 783 ntBASIC5.76□□□□□ -1.49
SOX2P48431 AC016722.1-201ENST00000453936 652 ntTSL 5 BASIC5.76□□□□□ -1.49
SOX2P48431 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC5.76□□□□□ -1.49
SOX2P48431 RPL7AP23-201ENST00000482625 776 ntBASIC5.76□□□□□ -1.49
SOX2P48431 AL135933.1-201ENST00000498657 802 ntBASIC5.76□□□□□ -1.49
SOX2P48431 AC021146.11-201ENST00000503319 491 ntBASIC5.76□□□□□ -1.49
SOX2P48431 Z99943.2-201ENST00000507585 266 ntBASIC5.76□□□□□ -1.49
SOX2P48431 NREP-217ENST00000509025 987 ntTSL 3 BASIC5.76□□□□□ -1.49
SOX2P48431 FABP5P6-201ENST00000510588 409 ntBASIC5.76□□□□□ -1.49
SOX2P48431 AC139713.1-202ENST00000512366 460 ntBASIC5.76□□□□□ -1.49
SOX2P48431 RNA5SP116-201ENST00000516132 98 ntBASIC5.76□□□□□ -1.49
SOX2P48431 AC103833.1-201ENST00000517442 172 ntBASIC5.76□□□□□ -1.49
SOX2P48431 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC5.76□□□□□ -1.49
SOX2P48431 C14orf159-213ENST00000519019 834 ntTSL 3 BASIC5.76□□□□□ -1.49
SOX2P48431 GRPEL2-AS1-201ENST00000521295 401 ntTSL 3 BASIC5.76□□□□□ -1.49
SOX2P48431 TBCA-209ENST00000522370 435 ntTSL 3 BASIC5.76□□□□□ -1.49
SOX2P48431 AP001646.2-201ENST00000528645 1156 ntBASIC5.76□□□□□ -1.49
SOX2P48431 AP006437.1-202ENST00000530327 933 ntBASIC5.76□□□□□ -1.49
SOX2P48431 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC5.76□□□□□ -1.49
SOX2P48431 RNASE11-208ENST00000555841 886 ntAPPRIS P2 TSL 1 (best) BASIC5.76□□□□□ -1.49
SOX2P48431 AC015914.1-201ENST00000558050 1072 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
SOX2P48431 LINC02284-201ENST00000558120 573 ntTSL 5 BASIC5.76□□□□□ -1.49
SOX2P48431 AC099511.1-201ENST00000564561 590 ntTSL 2 BASIC5.76□□□□□ -1.49
SOX2P48431 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC5.76□□□□□ -1.49
SOX2P48431 MIR3187-201ENST00000583431 70 ntBASIC5.76□□□□□ -1.49
SOX2P48431 Z99289.1-201ENST00000585373 807 ntTSL 3 BASIC5.76□□□□□ -1.49
SOX2P48431 AC105227.1-201ENST00000586227 438 ntTSL 5 BASIC5.76□□□□□ -1.49
SOX2P48431 CLIC4P2-201ENST00000601934 717 ntBASIC5.76□□□□□ -1.49
SOX2P48431 AL049840.5-201ENST00000602827 552 ntBASIC5.76□□□□□ -1.49
SOX2P48431 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC5.76□□□□□ -1.49
SOX2P48431 AL049840.6-201ENST00000604583 345 ntBASIC5.76□□□□□ -1.49
SOX2P48431 AC025171.4-201ENST00000607250 1047 ntBASIC5.76□□□□□ -1.49
SOX2P48431 AC245389.2-201ENST00000616023 576 ntBASIC5.76□□□□□ -1.49
SOX2P48431 AC242843.1-201ENST00000618702 573 ntBASIC5.76□□□□□ -1.49
SOX2P48431 MRPL57P1-201ENST00000621486 265 ntBASIC5.76□□□□□ -1.49
SOX2P48431 AC243725.1-201ENST00000637164 436 ntBASIC5.76□□□□□ -1.49
SOX2P48431 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC5.76□□□□□ -1.49
SOX2P48431 AL121936.2-201ENST00000641935 662 ntBASIC5.76□□□□□ -1.49
SOX2P48431 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC5.76□□□□□ -1.49
SOX2P48431 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
SOX2P48431 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
SOX2P48431 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
SOX2P48431 AC010624.4-201ENST00000597606 1351 ntBASIC5.76□□□□□ -1.49
SOX2P48431 AL049634.1-201ENST00000453770 1720 ntBASIC5.76□□□□□ -1.49
SOX2P48431 BBOX1-205ENST00000529202 1725 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
SOX2P48431 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
SOX2P48431 STIL-203ENST00000371877 5009 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
SOX2P48431 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
SOX2P48431 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC5.76□□□□□ -1.49
SOX2P48431 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
SOX2P48431 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC5.76□□□□□ -1.49
SOX2P48431 AC023245.2-201ENST00000530760 2978 ntBASIC5.76□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 73 ms