Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
VPS8Q8N3P4 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC9.57□□□□□ -0.88
VPS8Q8N3P4 AL358876.1-201ENST00000453364 1075 ntBASIC9.57□□□□□ -0.88
VPS8Q8N3P4 RN7SL269P-201ENST00000467795 305 ntBASIC9.57□□□□□ -0.88
VPS8Q8N3P4 AC094085.1-201ENST00000468914 584 ntBASIC9.57□□□□□ -0.88
VPS8Q8N3P4 AC098847.1-201ENST00000473094 348 ntBASIC9.57□□□□□ -0.88
VPS8Q8N3P4 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC9.57□□□□□ -0.88
VPS8Q8N3P4 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC9.57□□□□□ -0.88
VPS8Q8N3P4 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
VPS8Q8N3P4 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC9.57□□□□□ -0.88
VPS8Q8N3P4 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC9.57□□□□□ -0.88
VPS8Q8N3P4 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
VPS8Q8N3P4 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC9.57□□□□□ -0.88
VPS8Q8N3P4 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC9.57□□□□□ -0.88
VPS8Q8N3P4 AC079315.1-201ENST00000602952 623 ntBASIC9.57□□□□□ -0.88
VPS8Q8N3P4 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC9.57□□□□□ -0.88
VPS8Q8N3P4 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC9.57□□□□□ -0.88
VPS8Q8N3P4 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC9.57□□□□□ -0.88
VPS8Q8N3P4 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC9.57□□□□□ -0.88
VPS8Q8N3P4 GRIP1-202ENST00000398016 4888 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
VPS8Q8N3P4 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC9.57□□□□□ -0.88
VPS8Q8N3P4 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
VPS8Q8N3P4 L3MBTL3-201ENST00000361794 4217 ntAPPRIS P4 TSL 5 BASIC9.57□□□□□ -0.88
VPS8Q8N3P4 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
VPS8Q8N3P4 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC9.57□□□□□ -0.88
VPS8Q8N3P4 AP1G1-201ENST00000299980 6969 ntAPPRIS P3 TSL 1 (best) BASIC9.57□□□□□ -0.88
VPS8Q8N3P4 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
VPS8Q8N3P4 STT3A-214ENST00000531491 2160 ntTSL 2 BASIC9.57□□□□□ -0.88
VPS8Q8N3P4 OLFM4-201ENST00000219022 2897 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
VPS8Q8N3P4 CLTC-201ENST00000269122 7760 ntAPPRIS P3 TSL 1 (best) BASIC9.57□□□□□ -0.88
VPS8Q8N3P4 FRYL-210ENST00000507711 5277 ntTSL 2 BASIC9.57□□□□□ -0.88
VPS8Q8N3P4 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC9.56□□□□□ -0.88
VPS8Q8N3P4 ZCCHC6-203ENST00000375948 958 ntTSL 2 BASIC9.56□□□□□ -0.88
VPS8Q8N3P4 AP003170.5-201ENST00000397185 335 ntBASIC9.56□□□□□ -0.88
VPS8Q8N3P4 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC9.56□□□□□ -0.88
VPS8Q8N3P4 AC079922.1-201ENST00000443291 359 ntBASIC9.56□□□□□ -0.88
VPS8Q8N3P4 RPL23AP60-201ENST00000450011 454 ntBASIC9.56□□□□□ -0.88
VPS8Q8N3P4 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC9.56□□□□□ -0.88
VPS8Q8N3P4 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC9.56□□□□□ -0.88
VPS8Q8N3P4 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC9.56□□□□□ -0.88
VPS8Q8N3P4 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
VPS8Q8N3P4 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC9.56□□□□□ -0.88
VPS8Q8N3P4 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC9.56□□□□□ -0.88
VPS8Q8N3P4 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
VPS8Q8N3P4 AC006511.3-201ENST00000624929 1783 ntBASIC9.56□□□□□ -0.88
VPS8Q8N3P4 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC9.56□□□□□ -0.88
VPS8Q8N3P4 ZNF43-205ENST00000594012 5584 ntAPPRIS ALT2 TSL 2 BASIC9.56□□□□□ -0.88
VPS8Q8N3P4 JADE3-203ENST00000611250 4713 ntAPPRIS P1 TSL 2 BASIC9.56□□□□□ -0.88
VPS8Q8N3P4 BUB3-203ENST00000368865 7828 ntAPPRIS P3 TSL 1 (best) BASIC9.56□□□□□ -0.88
VPS8Q8N3P4 AP3M1-201ENST00000355264 5124 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
VPS8Q8N3P4 NUP107-211ENST00000539906 3004 ntTSL 2 BASIC9.56□□□□□ -0.88
VPS8Q8N3P4 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
VPS8Q8N3P4 AC016583.1-201ENST00000624221 2431 ntBASIC9.56□□□□□ -0.88
VPS8Q8N3P4 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC9.56□□□□□ -0.88
VPS8Q8N3P4 CTNND1-233ENST00000532787 5751 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
VPS8Q8N3P4 DPY19L1P1-201ENST00000417811 2594 ntBASIC9.56□□□□□ -0.88
VPS8Q8N3P4 SNORD8-201ENST00000363915 110 ntBASIC9.56□□□□□ -0.88
VPS8Q8N3P4 HMGA1P8-201ENST00000414130 321 ntBASIC9.56□□□□□ -0.88
VPS8Q8N3P4 RPL12P12-201ENST00000424633 501 ntBASIC9.56□□□□□ -0.88
VPS8Q8N3P4 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC9.56□□□□□ -0.88
VPS8Q8N3P4 AC084754.1-201ENST00000463466 464 ntBASIC9.56□□□□□ -0.88
VPS8Q8N3P4 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC9.56□□□□□ -0.88
VPS8Q8N3P4 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC9.56□□□□□ -0.88
VPS8Q8N3P4 AC005899.5-201ENST00000584721 552 ntTSL 5 BASIC9.56□□□□□ -0.88
VPS8Q8N3P4 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC9.56□□□□□ -0.88
VPS8Q8N3P4 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC9.56□□□□□ -0.88
VPS8Q8N3P4 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
VPS8Q8N3P4 AC096708.4-201ENST00000620563 552 ntBASIC9.56□□□□□ -0.88
VPS8Q8N3P4 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC9.56□□□□□ -0.88
VPS8Q8N3P4 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
VPS8Q8N3P4 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
VPS8Q8N3P4 SLC25A40-201ENST00000341119 4045 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
VPS8Q8N3P4 CDKAL1-202ENST00000378610 3115 ntAPPRIS P1 TSL 2 BASIC9.55□□□□□ -0.88
VPS8Q8N3P4 EZH1-202ENST00000428826 4623 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
VPS8Q8N3P4 NBPF14-209ENST00000620240 2656 ntTSL 5 BASIC9.55□□□□□ -0.88
VPS8Q8N3P4 POT1-202ENST00000393329 3950 ntTSL 5 BASIC9.55□□□□□ -0.88
VPS8Q8N3P4 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC9.55□□□□□ -0.88
VPS8Q8N3P4 ING3-204ENST00000431467 1447 ntTSL 2 BASIC9.55□□□□□ -0.88
VPS8Q8N3P4 OR52K1-202ENST00000641528 5456 ntAPPRIS P1 BASIC9.55□□□□□ -0.88
VPS8Q8N3P4 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC9.55□□□□□ -0.88
VPS8Q8N3P4 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC9.55□□□□□ -0.88
VPS8Q8N3P4 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC9.55□□□□□ -0.88
VPS8Q8N3P4 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC9.55□□□□□ -0.88
VPS8Q8N3P4 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC9.55□□□□□ -0.88
VPS8Q8N3P4 OR7E25P-201ENST00000344844 931 ntBASIC9.55□□□□□ -0.88
VPS8Q8N3P4 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC9.55□□□□□ -0.88
VPS8Q8N3P4 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC9.55□□□□□ -0.88
VPS8Q8N3P4 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC9.55□□□□□ -0.88
VPS8Q8N3P4 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC9.55□□□□□ -0.88
VPS8Q8N3P4 RN7SKP166-201ENST00000410812 305 ntBASIC9.55□□□□□ -0.88
VPS8Q8N3P4 HSD17B7P1-201ENST00000412419 1017 ntBASIC9.55□□□□□ -0.88
VPS8Q8N3P4 LINC01687-201ENST00000416327 795 ntTSL 3 BASIC9.55□□□□□ -0.88
VPS8Q8N3P4 PMCHL1-203ENST00000423301 697 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
VPS8Q8N3P4 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
VPS8Q8N3P4 ATP5LP2-201ENST00000440646 311 ntBASIC9.55□□□□□ -0.88
VPS8Q8N3P4 AC008945.1-201ENST00000505144 499 ntBASIC9.55□□□□□ -0.88
VPS8Q8N3P4 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC9.55□□□□□ -0.88
VPS8Q8N3P4 OR5H7P-201ENST00000514084 930 ntBASIC9.55□□□□□ -0.88
VPS8Q8N3P4 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC9.55□□□□□ -0.88
VPS8Q8N3P4 MIR6793-201ENST00000612376 63 ntBASIC9.55□□□□□ -0.88
Retrieved 100 of 98,524 protein–RNA pairs in 68.3 ms