Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CLDN12P56749 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CLDN12P56749 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
CLDN12P56749 AC138907.8-201ENST00000623981 2256 ntBASIC5.37□□□□□ -1.55
CLDN12P56749 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CLDN12P56749 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC5.37□□□□□ -1.55
CLDN12P56749 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CLDN12P56749 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
CLDN12P56749 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CLDN12P56749 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CLDN12P56749 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CLDN12P56749 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CLDN12P56749 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
CLDN12P56749 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
CLDN12P56749 OR7A2P-201ENST00000304105 930 ntBASIC5.37□□□□□ -1.55
CLDN12P56749 RNA5SP382-201ENST00000363355 112 ntBASIC5.37□□□□□ -1.55
CLDN12P56749 NCR2-201ENST00000373083 1154 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
CLDN12P56749 MRPS6P2-201ENST00000381143 370 ntBASIC5.37□□□□□ -1.55
CLDN12P56749 AL121977.1-201ENST00000401636 979 ntBASIC5.37□□□□□ -1.55
CLDN12P56749 EEF1GP6-201ENST00000402309 905 ntBASIC5.37□□□□□ -1.55
CLDN12P56749 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC5.37□□□□□ -1.55
CLDN12P56749 AHCYP8-201ENST00000425108 209 ntBASIC5.37□□□□□ -1.55
CLDN12P56749 AC009362.1-201ENST00000427253 406 ntBASIC5.37□□□□□ -1.55
CLDN12P56749 TRBV29OR9-2-201ENST00000427589 333 ntBASIC5.37□□□□□ -1.55
CLDN12P56749 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CLDN12P56749 IGLV3-4-201ENST00000432300 244 ntBASIC5.37□□□□□ -1.55
CLDN12P56749 USP24P1-201ENST00000433802 779 ntBASIC5.37□□□□□ -1.55
CLDN12P56749 RPS3AP38-201ENST00000435889 763 ntBASIC5.37□□□□□ -1.55
CLDN12P56749 CR391992.1-201ENST00000438601 394 ntBASIC5.37□□□□□ -1.55
CLDN12P56749 AL450003.1-201ENST00000439447 455 ntTSL 2 BASIC5.37□□□□□ -1.55
CLDN12P56749 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC5.37□□□□□ -1.55
CLDN12P56749 AC016908.1-201ENST00000442571 1219 ntBASIC5.37□□□□□ -1.55
CLDN12P56749 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC5.37□□□□□ -1.55
CLDN12P56749 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CLDN12P56749 RANP2-201ENST00000456833 229 ntBASIC5.37□□□□□ -1.55
CLDN12P56749 UCK2-205ENST00000469256 753 ntTSL 3 BASIC5.37□□□□□ -1.55
CLDN12P56749 AC084024.1-201ENST00000476186 621 ntTSL 5 BASIC5.37□□□□□ -1.55
CLDN12P56749 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC5.37□□□□□ -1.55
CLDN12P56749 LINC01262-201ENST00000513681 879 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CLDN12P56749 XAGE1B-205ENST00000518075 472 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
CLDN12P56749 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC5.37□□□□□ -1.55
CLDN12P56749 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC5.37□□□□□ -1.55
CLDN12P56749 RPA2P3-201ENST00000533268 770 ntBASIC5.37□□□□□ -1.55
CLDN12P56749 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC5.37□□□□□ -1.55
CLDN12P56749 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC5.37□□□□□ -1.55
CLDN12P56749 AC025430.1-201ENST00000561324 498 ntTSL 3 BASIC5.37□□□□□ -1.55
CLDN12P56749 DYNLRB2-204ENST00000562982 492 ntTSL 3 BASIC5.37□□□□□ -1.55
CLDN12P56749 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC5.37□□□□□ -1.55
CLDN12P56749 AC023389.2-201ENST00000580031 955 ntBASIC5.37□□□□□ -1.55
CLDN12P56749 AC005208.1-202ENST00000587325 725 ntTSL 3 BASIC5.37□□□□□ -1.55
CLDN12P56749 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC5.37□□□□□ -1.55
CLDN12P56749 AC097467.3-210ENST00000597939 705 ntTSL 5 BASIC5.37□□□□□ -1.55
CLDN12P56749 MIR4435-2HG-219ENST00000609220 883 ntTSL 3 BASIC5.37□□□□□ -1.55
CLDN12P56749 LINC00484-208ENST00000609752 591 ntTSL 4 BASIC5.37□□□□□ -1.55
CLDN12P56749 MIR7159-201ENST00000620587 66 ntBASIC5.37□□□□□ -1.55
CLDN12P56749 AC005514.1-201ENST00000623521 208 ntBASIC5.37□□□□□ -1.55
CLDN12P56749 SAMD12-AS1-201ENST00000625758 718 ntTSL 5 BASIC5.37□□□□□ -1.55
CLDN12P56749 JAKMIP2-AS1-202ENST00000627433 831 ntTSL 3 BASIC5.37□□□□□ -1.55
CLDN12P56749 AC000095.2-202ENST00000637415 154 ntBASIC5.37□□□□□ -1.55
CLDN12P56749 GOSR2-222ENST00000639031 885 ntTSL 3 BASIC5.37□□□□□ -1.55
CLDN12P56749 TAF12-202ENST00000373824 1334 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CLDN12P56749 QRSL1P3-201ENST00000552666 1316 ntBASIC5.37□□□□□ -1.55
CLDN12P56749 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CLDN12P56749 AL591135.1-201ENST00000401578 5914 ntBASIC5.37□□□□□ -1.55
CLDN12P56749 AC140134.1-201ENST00000511830 3544 ntBASIC5.37□□□□□ -1.55
CLDN12P56749 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC5.37□□□□□ -1.55
CLDN12P56749 AC099654.3-201ENST00000447087 1546 ntBASIC5.37□□□□□ -1.55
CLDN12P56749 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC5.37□□□□□ -1.55
CLDN12P56749 RPL31P11-201ENST00000426558 1558 ntBASIC5.37□□□□□ -1.55
CLDN12P56749 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CLDN12P56749 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC5.37□□□□□ -1.55
CLDN12P56749 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC5.37□□□□□ -1.55
CLDN12P56749 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC5.37□□□□□ -1.55
CLDN12P56749 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
CLDN12P56749 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CLDN12P56749 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC5.37□□□□□ -1.55
CLDN12P56749 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CLDN12P56749 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC5.36□□□□□ -1.55
CLDN12P56749 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CLDN12P56749 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC5.36□□□□□ -1.55
CLDN12P56749 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC5.36□□□□□ -1.55
CLDN12P56749 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
CLDN12P56749 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
CLDN12P56749 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
CLDN12P56749 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
CLDN12P56749 TRAV22-201ENST00000390450 464 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
CLDN12P56749 AC024937.2-201ENST00000411669 1242 ntBASIC5.36□□□□□ -1.55
CLDN12P56749 CYTOR-207ENST00000414584 772 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CLDN12P56749 MICG-208ENST00000416822 132 ntBASIC5.36□□□□□ -1.55
CLDN12P56749 AC233728.1-201ENST00000418049 218 ntTSL 5 BASIC5.36□□□□□ -1.55
CLDN12P56749 YWHAZP5-201ENST00000419975 730 ntBASIC5.36□□□□□ -1.55
CLDN12P56749 SETP9-201ENST00000423837 832 ntBASIC5.36□□□□□ -1.55
CLDN12P56749 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC5.36□□□□□ -1.55
CLDN12P56749 AC092164.1-201ENST00000452212 726 ntTSL 2 BASIC5.36□□□□□ -1.55
CLDN12P56749 DIRC3-AS1-201ENST00000452813 557 ntTSL 3 BASIC5.36□□□□□ -1.55
CLDN12P56749 RPL7AP30-201ENST00000482859 796 ntBASIC5.36□□□□□ -1.55
CLDN12P56749 RN7SL714P-201ENST00000487050 298 ntBASIC5.36□□□□□ -1.55
CLDN12P56749 AC137549.1-201ENST00000514243 533 ntBASIC5.36□□□□□ -1.55
CLDN12P56749 RN7SKP196-201ENST00000516267 345 ntBASIC5.36□□□□□ -1.55
CLDN12P56749 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC5.36□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 114.2 ms