Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 AC008945.1-201ENST00000505144 499 ntBASIC6.54□□□□□ -1.36
SLC1A1P43005 OSTC-204ENST00000512478 663 ntTSL 5 BASIC6.54□□□□□ -1.36
SLC1A1P43005 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC6.54□□□□□ -1.36
SLC1A1P43005 AC011396.2-201ENST00000515598 582 ntTSL 3 BASIC6.54□□□□□ -1.36
SLC1A1P43005 AC079600.3-201ENST00000547898 447 ntTSL 5 BASIC6.54□□□□□ -1.36
SLC1A1P43005 AP3S2-214ENST00000560940 519 ntTSL 5 BASIC6.54□□□□□ -1.36
SLC1A1P43005 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC6.54□□□□□ -1.36
SLC1A1P43005 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC6.54□□□□□ -1.36
SLC1A1P43005 LIPF-205ENST00000608620 1290 ntTSL 2 BASIC6.54□□□□□ -1.36
SLC1A1P43005 AC010998.3-201ENST00000613871 631 ntBASIC6.54□□□□□ -1.36
SLC1A1P43005 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC6.54□□□□□ -1.36
SLC1A1P43005 ZFP42-201ENST00000326866 2651 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
SLC1A1P43005 DYDC2-201ENST00000256039 1842 ntAPPRIS P3 TSL 2 BASIC6.54□□□□□ -1.36
SLC1A1P43005 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC6.54□□□□□ -1.36
SLC1A1P43005 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
SLC1A1P43005 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC6.54□□□□□ -1.36
SLC1A1P43005 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
SLC1A1P43005 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
SLC1A1P43005 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC6.54□□□□□ -1.36
SLC1A1P43005 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC6.54□□□□□ -1.36
SLC1A1P43005 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
SLC1A1P43005 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC6.53□□□□□ -1.36
SLC1A1P43005 NADK2-201ENST00000282512 2507 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
SLC1A1P43005 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
SLC1A1P43005 SLC25A30-204ENST00000519676 3670 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
SLC1A1P43005 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC6.53□□□□□ -1.36
SLC1A1P43005 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC6.53□□□□□ -1.36
SLC1A1P43005 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
SLC1A1P43005 NPIPB8-202ENST00000529716 2058 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
SLC1A1P43005 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC6.53□□□□□ -1.36
SLC1A1P43005 PLCB1-202ENST00000378637 3864 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
SLC1A1P43005 PAGE2-201ENST00000374965 456 ntTSL 2 BASIC6.53□□□□□ -1.36
SLC1A1P43005 SNORD94-201ENST00000386037 137 ntBASIC6.53□□□□□ -1.36
SLC1A1P43005 OR2W4P-201ENST00000406496 926 ntBASIC6.53□□□□□ -1.36
SLC1A1P43005 AL033519.1-201ENST00000407266 307 ntBASIC6.53□□□□□ -1.36
SLC1A1P43005 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC6.53□□□□□ -1.36
SLC1A1P43005 AC002127.1-201ENST00000421305 225 ntBASIC6.53□□□□□ -1.36
SLC1A1P43005 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC6.53□□□□□ -1.36
SLC1A1P43005 AL354707.3-201ENST00000427308 331 ntBASIC6.53□□□□□ -1.36
SLC1A1P43005 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC6.53□□□□□ -1.36
SLC1A1P43005 GTF2IP14-201ENST00000441415 586 ntBASIC6.53□□□□□ -1.36
SLC1A1P43005 AL035443.1-202ENST00000442841 586 ntTSL 2 BASIC6.53□□□□□ -1.36
SLC1A1P43005 ATP5J2-205ENST00000449683 460 ntTSL 3 BASIC6.53□□□□□ -1.36
SLC1A1P43005 LINC01618-201ENST00000514957 727 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
SLC1A1P43005 AC069234.2-202ENST00000535720 583 ntTSL 5 BASIC6.53□□□□□ -1.36
SLC1A1P43005 UBE2N-204ENST00000549833 960 ntTSL 3 BASIC6.53□□□□□ -1.36
SLC1A1P43005 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC6.53□□□□□ -1.36
SLC1A1P43005 DAAM1-208ENST00000556135 582 ntTSL 3 BASIC6.53□□□□□ -1.36
SLC1A1P43005 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC6.53□□□□□ -1.36
SLC1A1P43005 AC020916.2-201ENST00000591242 360 ntBASIC6.53□□□□□ -1.36
SLC1A1P43005 IGKV2OR2-7D-201ENST00000603664 304 ntBASIC6.53□□□□□ -1.36
SLC1A1P43005 IGKV2OR2-7-201ENST00000604652 304 ntBASIC6.53□□□□□ -1.36
SLC1A1P43005 AL008582.1-201ENST00000609612 442 ntBASIC6.53□□□□□ -1.36
SLC1A1P43005 AC021422.1-201ENST00000621212 473 ntBASIC6.53□□□□□ -1.36
SLC1A1P43005 MIR6503-201ENST00000622884 86 ntBASIC6.53□□□□□ -1.36
SLC1A1P43005 LINC01676-209ENST00000623043 896 ntTSL 4 BASIC6.53□□□□□ -1.36
SLC1A1P43005 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC6.53□□□□□ -1.36
SLC1A1P43005 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
SLC1A1P43005 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
SLC1A1P43005 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
SLC1A1P43005 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
SLC1A1P43005 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
SLC1A1P43005 ATP5A1P4-201ENST00000556888 1605 ntBASIC6.53□□□□□ -1.36
SLC1A1P43005 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
SLC1A1P43005 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC6.53□□□□□ -1.36
SLC1A1P43005 ZNF101P1-201ENST00000435701 1720 ntBASIC6.53□□□□□ -1.36
SLC1A1P43005 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
SLC1A1P43005 CENPN-203ENST00000393335 1556 ntTSL 2 BASIC6.52□□□□□ -1.36
SLC1A1P43005 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
SLC1A1P43005 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
SLC1A1P43005 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
SLC1A1P43005 AC018765.1-201ENST00000623357 3446 ntBASIC6.52□□□□□ -1.37
SLC1A1P43005 AC079248.1-201ENST00000427568 1546 ntBASIC6.52□□□□□ -1.37
SLC1A1P43005 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC6.52□□□□□ -1.37
SLC1A1P43005 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
SLC1A1P43005 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
SLC1A1P43005 SNORA43.1-201ENST00000364863 140 ntBASIC6.52□□□□□ -1.37
SLC1A1P43005 TRAJ46-201ENST00000390491 63 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
SLC1A1P43005 GGA1-205ENST00000405147 575 ntTSL 4 BASIC6.52□□□□□ -1.37
SLC1A1P43005 UBTFL2-201ENST00000411859 1191 ntBASIC6.52□□□□□ -1.37
SLC1A1P43005 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC6.52□□□□□ -1.37
SLC1A1P43005 FBXW12-203ENST00000436231 1117 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
SLC1A1P43005 SOCS5P1-201ENST00000440415 949 ntBASIC6.52□□□□□ -1.37
SLC1A1P43005 AL445623.1-201ENST00000440888 237 ntTSL 3 BASIC6.52□□□□□ -1.37
SLC1A1P43005 AL445991.1-201ENST00000450381 475 ntBASIC6.52□□□□□ -1.37
SLC1A1P43005 AL034369.1-201ENST00000453808 477 ntBASIC6.52□□□□□ -1.37
SLC1A1P43005 RAB28P2-201ENST00000454299 641 ntBASIC6.52□□□□□ -1.37
SLC1A1P43005 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC6.52□□□□□ -1.37
SLC1A1P43005 AC063955.1-201ENST00000462872 685 ntBASIC6.52□□□□□ -1.37
SLC1A1P43005 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC6.52□□□□□ -1.37
SLC1A1P43005 IGHVIII-47-1-201ENST00000518187 331 ntBASIC6.52□□□□□ -1.37
SLC1A1P43005 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC6.52□□□□□ -1.37
SLC1A1P43005 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
SLC1A1P43005 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC6.52□□□□□ -1.37
SLC1A1P43005 AC027796.1-201ENST00000575593 512 ntBASIC6.52□□□□□ -1.37
SLC1A1P43005 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC6.52□□□□□ -1.37
SLC1A1P43005 AC004890.3-201ENST00000605566 1095 ntBASIC6.52□□□□□ -1.37
SLC1A1P43005 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC6.52□□□□□ -1.37
SLC1A1P43005 AL589182.1-201ENST00000611785 320 ntTSL 5 BASIC6.52□□□□□ -1.37
SLC1A1P43005 AC063952.1-203ENST00000634410 658 ntBASIC6.52□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 91.1 ms