Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 ARHGAP21-201ENST00000320481 4343 ntTSL 5 BASIC6.9□□□□□ -1.3
COL6A2P12110 DCSTAMP-201ENST00000297581 1953 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
COL6A2P12110 THSD7B-202ENST00000409968 6111 ntAPPRIS P2 TSL 5 BASIC6.9□□□□□ -1.3
COL6A2P12110 BPIFC-203ENST00000397452 2091 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.3
COL6A2P12110 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC6.9□□□□□ -1.3
COL6A2P12110 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
COL6A2P12110 OR1A1-201ENST00000304094 930 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
COL6A2P12110 RNU6-906P-201ENST00000384700 70 ntBASIC6.9□□□□□ -1.3
COL6A2P12110 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
COL6A2P12110 TAF9BP2-201ENST00000400856 499 ntBASIC6.9□□□□□ -1.3
COL6A2P12110 AC006547.2-201ENST00000412713 526 ntTSL 4 BASIC6.9□□□□□ -1.3
COL6A2P12110 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC6.9□□□□□ -1.3
COL6A2P12110 RPL5P2-201ENST00000429598 854 ntBASIC6.9□□□□□ -1.3
COL6A2P12110 PRPS1P2-201ENST00000430496 937 ntBASIC6.9□□□□□ -1.3
COL6A2P12110 ECHDC1-207ENST00000430841 1009 ntAPPRIS P3 TSL 5 BASIC6.9□□□□□ -1.3
COL6A2P12110 AL162231.2-201ENST00000434627 665 ntTSL 2 BASIC6.9□□□□□ -1.3
COL6A2P12110 RAB9AP5-201ENST00000437794 597 ntBASIC6.9□□□□□ -1.3
COL6A2P12110 MED6P1-201ENST00000439659 713 ntBASIC6.9□□□□□ -1.3
COL6A2P12110 RAB9AP2-201ENST00000443911 597 ntBASIC6.9□□□□□ -1.3
COL6A2P12110 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC6.9□□□□□ -1.3
COL6A2P12110 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC6.9□□□□□ -1.3
COL6A2P12110 CBX1P5-201ENST00000475330 559 ntBASIC6.9□□□□□ -1.3
COL6A2P12110 AC117395.1-201ENST00000487390 403 ntBASIC6.9□□□□□ -1.3
COL6A2P12110 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC6.9□□□□□ -1.3
COL6A2P12110 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC6.9□□□□□ -1.3
COL6A2P12110 AC063943.2-201ENST00000495697 534 ntBASIC6.9□□□□□ -1.3
COL6A2P12110 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC6.9□□□□□ -1.3
COL6A2P12110 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC6.9□□□□□ -1.3
COL6A2P12110 CC2D2A-207ENST00000507954 548 ntAPPRIS ALT2 TSL 2 BASIC6.9□□□□□ -1.3
COL6A2P12110 CHCHD2P7-201ENST00000508008 452 ntBASIC6.9□□□□□ -1.3
COL6A2P12110 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC6.9□□□□□ -1.3
COL6A2P12110 HMMR-AS1-201ENST00000514724 697 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
COL6A2P12110 BUD31P1-201ENST00000521828 359 ntBASIC6.9□□□□□ -1.3
COL6A2P12110 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC6.9□□□□□ -1.3
COL6A2P12110 AC010247.1-201ENST00000527895 759 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
COL6A2P12110 SETP17-201ENST00000534163 817 ntBASIC6.9□□□□□ -1.3
COL6A2P12110 ASB8-203ENST00000535988 679 ntTSL 2 BASIC6.9□□□□□ -1.3
COL6A2P12110 VDAC2P2-201ENST00000544463 901 ntBASIC6.9□□□□□ -1.3
COL6A2P12110 AC027667.1-201ENST00000545814 304 ntBASIC6.9□□□□□ -1.3
COL6A2P12110 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC6.9□□□□□ -1.3
COL6A2P12110 AC090181.1-201ENST00000560446 264 ntTSL 3 BASIC6.9□□□□□ -1.3
COL6A2P12110 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC6.9□□□□□ -1.3
COL6A2P12110 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC6.9□□□□□ -1.3
COL6A2P12110 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC6.9□□□□□ -1.3
COL6A2P12110 LAMTOR5-AS1-207ENST00000590826 574 ntTSL 4 BASIC6.9□□□□□ -1.3
COL6A2P12110 AC007785.3-202ENST00000601033 518 ntTSL 3 BASIC6.9□□□□□ -1.3
COL6A2P12110 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC6.9□□□□□ -1.3
COL6A2P12110 AC004232.3-201ENST00000622977 525 ntBASIC6.9□□□□□ -1.3
COL6A2P12110 AC078883.4-201ENST00000623218 367 ntBASIC6.9□□□□□ -1.3
COL6A2P12110 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC6.9□□□□□ -1.3
COL6A2P12110 OR51B2-201ENST00000624187 939 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
COL6A2P12110 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC6.9□□□□□ -1.3
COL6A2P12110 AC104073.4-201ENST00000632111 598 ntTSL 2 BASIC6.9□□□□□ -1.3
COL6A2P12110 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC6.9□□□□□ -1.3
COL6A2P12110 EEF1A1P30-201ENST00000429708 1315 ntBASIC6.9□□□□□ -1.3
COL6A2P12110 AC008432.1-201ENST00000615912 1320 ntBASIC6.9□□□□□ -1.3
COL6A2P12110 AC245100.4-202ENST00000634638 1342 ntTSL 5 BASIC6.9□□□□□ -1.3
COL6A2P12110 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC6.9□□□□□ -1.31
COL6A2P12110 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC6.9□□□□□ -1.31
COL6A2P12110 SLC22A25-201ENST00000306494 1692 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
COL6A2P12110 AL451064.2-201ENST00000623514 1654 ntBASIC6.9□□□□□ -1.31
COL6A2P12110 MAPK10-366ENST00000641903 2812 ntAPPRIS ALT1 BASIC6.9□□□□□ -1.31
COL6A2P12110 CDON-201ENST00000263577 4186 ntAPPRIS P3 TSL 1 (best) BASIC6.9□□□□□ -1.31
COL6A2P12110 L3MBTL3-201ENST00000361794 4217 ntAPPRIS P4 TSL 5 BASIC6.9□□□□□ -1.31
COL6A2P12110 DAZ1-203ENST00000426000 1846 ntTSL 5 BASIC6.9□□□□□ -1.31
COL6A2P12110 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC6.89□□□□□ -1.31
COL6A2P12110 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
COL6A2P12110 ZBTB25-204ENST00000608382 10372 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
COL6A2P12110 PAK3-203ENST00000372007 8940 ntAPPRIS P3 TSL 1 (best) BASIC6.89□□□□□ -1.31
COL6A2P12110 NIN-204ENST00000382043 4216 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
COL6A2P12110 FYB1-209ENST00000512982 2747 ntAPPRIS ALT2 TSL 2 BASIC6.89□□□□□ -1.31
COL6A2P12110 IARS-202ENST00000375643 4656 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
COL6A2P12110 RASGRF1-201ENST00000394745 2850 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
COL6A2P12110 PRRC1-202ENST00000442138 5504 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
COL6A2P12110 INTS6-203ENST00000442263 15428 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
COL6A2P12110 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
COL6A2P12110 NOP10-201ENST00000328848 554 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
COL6A2P12110 RNA5SP427-201ENST00000365323 119 ntBASIC6.89□□□□□ -1.31
COL6A2P12110 ATP5F1P2-201ENST00000398143 760 ntBASIC6.89□□□□□ -1.31
COL6A2P12110 AC098592.2-201ENST00000413158 265 ntBASIC6.89□□□□□ -1.31
COL6A2P12110 SLC20A1P1-201ENST00000413906 956 ntBASIC6.89□□□□□ -1.31
COL6A2P12110 Z68694.1-201ENST00000413929 841 ntBASIC6.89□□□□□ -1.31
COL6A2P12110 TATDN1P1-201ENST00000414123 891 ntBASIC6.89□□□□□ -1.31
COL6A2P12110 MTCO3P4-201ENST00000419236 787 ntBASIC6.89□□□□□ -1.31
COL6A2P12110 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC6.89□□□□□ -1.31
COL6A2P12110 AL513164.1-201ENST00000423268 311 ntTSL 3 BASIC6.89□□□□□ -1.31
COL6A2P12110 AL604028.1-201ENST00000430643 598 ntTSL 2 BASIC6.89□□□□□ -1.31
COL6A2P12110 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC6.89□□□□□ -1.31
COL6A2P12110 AC007563.3-201ENST00000433233 371 ntBASIC6.89□□□□□ -1.31
COL6A2P12110 SUMO2P8-201ENST00000434672 286 ntBASIC6.89□□□□□ -1.31
COL6A2P12110 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC6.89□□□□□ -1.31
COL6A2P12110 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
COL6A2P12110 RPL6P5-201ENST00000445678 828 ntBASIC6.89□□□□□ -1.31
COL6A2P12110 ZNF32-AS1-201ENST00000453284 434 ntTSL 5 BASIC6.89□□□□□ -1.31
COL6A2P12110 AL391422.2-202ENST00000454396 347 ntTSL 5 BASIC6.89□□□□□ -1.31
COL6A2P12110 PGAP2-210ENST00000464441 699 ntTSL 5 BASIC6.89□□□□□ -1.31
COL6A2P12110 LINC00881-201ENST00000467995 589 ntTSL 4 BASIC6.89□□□□□ -1.31
COL6A2P12110 RN7SL228P-201ENST00000470060 303 ntBASIC6.89□□□□□ -1.31
COL6A2P12110 RN7SL563P-201ENST00000481233 298 ntBASIC6.89□□□□□ -1.31
COL6A2P12110 AC016687.1-201ENST00000482574 353 ntBASIC6.89□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 91 ms