Protein–RNA interactions for Protein: O95155

UBE4B, Ubiquitin conjugation factor E4 B, humanhuman

Predictions only

Length 1,302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4BO95155 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC6.9□□□□□ -1.31
UBE4BO95155 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
UBE4BO95155 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC6.9□□□□□ -1.31
UBE4BO95155 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC6.9□□□□□ -1.31
UBE4BO95155 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC6.9□□□□□ -1.31
UBE4BO95155 FBXW12-204ENST00000445170 1379 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
UBE4BO95155 TMEM167B-201ENST00000338272 3730 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
UBE4BO95155 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC6.9□□□□□ -1.31
UBE4BO95155 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
UBE4BO95155 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
UBE4BO95155 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
UBE4BO95155 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC6.89□□□□□ -1.31
UBE4BO95155 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
UBE4BO95155 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
UBE4BO95155 KIF20A-201ENST00000394894 3201 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
UBE4BO95155 HOXD8-202ENST00000429017 1608 ntTSL 2 BASIC6.89□□□□□ -1.31
UBE4BO95155 ZMYND11-202ENST00000381584 2709 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
UBE4BO95155 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC6.89□□□□□ -1.31
UBE4BO95155 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
UBE4BO95155 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
UBE4BO95155 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC6.89□□□□□ -1.31
UBE4BO95155 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
UBE4BO95155 RNA5SP346-201ENST00000363541 121 ntBASIC6.89□□□□□ -1.31
UBE4BO95155 RN7SKP237-201ENST00000364663 301 ntBASIC6.89□□□□□ -1.31
UBE4BO95155 RNA5SP77-201ENST00000365394 120 ntBASIC6.89□□□□□ -1.31
UBE4BO95155 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
UBE4BO95155 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
UBE4BO95155 RPS7P14-201ENST00000426405 583 ntBASIC6.89□□□□□ -1.31
UBE4BO95155 AL513348.1-201ENST00000435554 440 ntTSL 3 BASIC6.89□□□□□ -1.31
UBE4BO95155 NDUFB3-204ENST00000454214 547 ntAPPRIS P1 TSL 2 BASIC6.89□□□□□ -1.31
UBE4BO95155 NDUFB2-210ENST00000475276 539 ntTSL 4 BASIC6.89□□□□□ -1.31
UBE4BO95155 LINC01093-201ENST00000506479 634 ntTSL 3 BASIC6.89□□□□□ -1.31
UBE4BO95155 ZFAND1-204ENST00000517588 633 ntTSL 2 BASIC6.89□□□□□ -1.31
UBE4BO95155 NATP-201ENST00000523491 878 ntBASIC6.89□□□□□ -1.31
UBE4BO95155 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC6.89□□□□□ -1.31
UBE4BO95155 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
UBE4BO95155 AC009387.1-201ENST00000549163 441 ntTSL 3 BASIC6.89□□□□□ -1.31
UBE4BO95155 MT1CP-201ENST00000567054 174 ntBASIC6.89□□□□□ -1.31
UBE4BO95155 NDUFB9P1-201ENST00000604683 510 ntBASIC6.89□□□□□ -1.31
UBE4BO95155 AL591167.1-201ENST00000607321 456 ntBASIC6.89□□□□□ -1.31
UBE4BO95155 MIR6823-201ENST00000622118 61 ntBASIC6.89□□□□□ -1.31
UBE4BO95155 AL122023.1-201ENST00000622847 530 ntBASIC6.89□□□□□ -1.31
UBE4BO95155 AC003992.1-201ENST00000635364 557 ntBASIC6.89□□□□□ -1.31
UBE4BO95155 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
UBE4BO95155 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC6.89□□□□□ -1.31
UBE4BO95155 AC007278.1-201ENST00000450893 1327 ntTSL 3 BASIC6.89□□□□□ -1.31
UBE4BO95155 AKAP17BP-201ENST00000431706 2719 ntBASIC6.89□□□□□ -1.31
UBE4BO95155 HDAC1P2-201ENST00000453661 1398 ntBASIC6.89□□□□□ -1.31
UBE4BO95155 AOX3P-204ENST00000491025 2107 ntBASIC6.89□□□□□ -1.31
UBE4BO95155 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
UBE4BO95155 ELOVL5-203ENST00000370918 3081 ntTSL 2 BASIC6.89□□□□□ -1.31
UBE4BO95155 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC6.89□□□□□ -1.31
UBE4BO95155 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC6.89□□□□□ -1.31
UBE4BO95155 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC6.89□□□□□ -1.31
UBE4BO95155 DMD-205ENST00000359836 7339 ntTSL 5 BASIC6.88□□□□□ -1.31
UBE4BO95155 IGSF6-201ENST00000268389 2785 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
UBE4BO95155 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
UBE4BO95155 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC6.88□□□□□ -1.31
UBE4BO95155 POT1-202ENST00000393329 3950 ntTSL 5 BASIC6.88□□□□□ -1.31
UBE4BO95155 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
UBE4BO95155 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC6.88□□□□□ -1.31
UBE4BO95155 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
UBE4BO95155 AL121823.1-201ENST00000418369 741 ntTSL 3 BASIC6.88□□□□□ -1.31
UBE4BO95155 AC094019.1-201ENST00000434678 472 ntBASIC6.88□□□□□ -1.31
UBE4BO95155 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
UBE4BO95155 RPL7L1P3-201ENST00000455249 689 ntBASIC6.88□□□□□ -1.31
UBE4BO95155 LINC01487-201ENST00000462531 905 ntTSL 2 BASIC6.88□□□□□ -1.31
UBE4BO95155 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC6.88□□□□□ -1.31
UBE4BO95155 RN7SL104P-201ENST00000498686 293 ntBASIC6.88□□□□□ -1.31
UBE4BO95155 RNA5SP206-201ENST00000516703 121 ntBASIC6.88□□□□□ -1.31
UBE4BO95155 IGHV7-34-1-201ENST00000519200 350 ntBASIC6.88□□□□□ -1.31
UBE4BO95155 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC6.88□□□□□ -1.31
UBE4BO95155 AP003100.1-201ENST00000524772 832 ntTSL 3 BASIC6.88□□□□□ -1.31
UBE4BO95155 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC6.88□□□□□ -1.31
UBE4BO95155 AC016590.3-201ENST00000611171 753 ntBASIC6.88□□□□□ -1.31
UBE4BO95155 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC6.88□□□□□ -1.31
UBE4BO95155 AC010325.3-201ENST00000641084 394 ntBASIC6.88□□□□□ -1.31
UBE4BO95155 DMD-222ENST00000474231 5209 ntTSL 5 BASIC6.88□□□□□ -1.31
UBE4BO95155 CCNT2P1-201ENST00000423082 1315 ntBASIC6.88□□□□□ -1.31
UBE4BO95155 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
UBE4BO95155 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
UBE4BO95155 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
UBE4BO95155 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
UBE4BO95155 OR52B5P-204ENST00000641744 3467 ntBASIC6.88□□□□□ -1.31
UBE4BO95155 OR7A17-202ENST00000641113 3639 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
UBE4BO95155 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC6.88□□□□□ -1.31
UBE4BO95155 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC6.88□□□□□ -1.31
UBE4BO95155 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
UBE4BO95155 NLGN4X-202ENST00000381092 3750 ntAPPRIS P2 TSL 2 BASIC6.87□□□□□ -1.31
UBE4BO95155 AC110716.2-201ENST00000563865 3945 ntBASIC6.87□□□□□ -1.31
UBE4BO95155 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC6.87□□□□□ -1.31
UBE4BO95155 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
UBE4BO95155 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
UBE4BO95155 RNU1-49P-201ENST00000363468 159 ntBASIC6.87□□□□□ -1.31
UBE4BO95155 SNORA43.1-201ENST00000364863 140 ntBASIC6.87□□□□□ -1.31
UBE4BO95155 PAGE2B-201ENST00000374971 493 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
UBE4BO95155 AL157702.1-201ENST00000398764 426 ntBASIC6.87□□□□□ -1.31
UBE4BO95155 AL139805.1-201ENST00000407837 289 ntBASIC6.87□□□□□ -1.31
UBE4BO95155 RNA5SP251-201ENST00000410614 137 ntBASIC6.87□□□□□ -1.31
UBE4BO95155 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC6.87□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 72 ms