Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 RPL23AP96-201ENST00000514593 591 ntBASIC3.07□□□□□ -1.92
LINC01558Q9Y6Z2 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
LINC01558Q9Y6Z2 OSTCP1-202ENST00000522287 1195 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
LINC01558Q9Y6Z2 ATOX1-205ENST00000522314 724 ntTSL 2 BASIC3.07□□□□□ -1.92
LINC01558Q9Y6Z2 AC130365.2-201ENST00000525882 1201 ntBASIC3.07□□□□□ -1.92
LINC01558Q9Y6Z2 AC021269.1-201ENST00000526860 705 ntBASIC3.07□□□□□ -1.92
LINC01558Q9Y6Z2 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC3.07□□□□□ -1.92
LINC01558Q9Y6Z2 PRH1-204ENST00000539853 837 ntAPPRIS ALT2 TSL 5 BASIC3.07□□□□□ -1.92
LINC01558Q9Y6Z2 AC069240.2-201ENST00000550242 609 ntBASIC3.07□□□□□ -1.92
LINC01558Q9Y6Z2 GNG2-203ENST00000553432 577 ntTSL 4 BASIC3.07□□□□□ -1.92
LINC01558Q9Y6Z2 AL358913.1-201ENST00000554342 121 ntBASIC3.07□□□□□ -1.92
LINC01558Q9Y6Z2 LINC00520-204ENST00000556417 778 ntTSL 3 BASIC3.07□□□□□ -1.92
LINC01558Q9Y6Z2 AC009269.2-201ENST00000559892 474 ntBASIC3.07□□□□□ -1.92
LINC01558Q9Y6Z2 LINC02191-201ENST00000568036 518 ntTSL 4 BASIC3.07□□□□□ -1.92
LINC01558Q9Y6Z2 CASC22-201ENST00000569713 386 ntTSL 5 BASIC3.07□□□□□ -1.92
LINC01558Q9Y6Z2 RN7SL44P-201ENST00000583849 302 ntBASIC3.07□□□□□ -1.92
LINC01558Q9Y6Z2 AL161725.1-210ENST00000590240 1224 ntTSL 5 BASIC3.07□□□□□ -1.92
LINC01558Q9Y6Z2 AC011491.3-201ENST00000595644 559 ntTSL 4 BASIC3.07□□□□□ -1.92
LINC01558Q9Y6Z2 AL008723.3-201ENST00000608926 449 ntBASIC3.07□□□□□ -1.92
LINC01558Q9Y6Z2 AL450487.2-201ENST00000615934 407 ntBASIC3.07□□□□□ -1.92
LINC01558Q9Y6Z2 AC244517.3-201ENST00000616254 1235 ntBASIC3.07□□□□□ -1.92
LINC01558Q9Y6Z2 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC3.07□□□□□ -1.92
LINC01558Q9Y6Z2 HOTTIP_2.1-201ENST00000616633 376 ntBASIC3.07□□□□□ -1.92
LINC01558Q9Y6Z2 OR8G7P-201ENST00000616658 848 ntBASIC3.07□□□□□ -1.92
LINC01558Q9Y6Z2 IL13-206ENST00000617259 498 ntAPPRIS ALT2 TSL 5 BASIC3.07□□□□□ -1.92
LINC01558Q9Y6Z2 AL121890.2-201ENST00000617644 465 ntBASIC3.07□□□□□ -1.92
LINC01558Q9Y6Z2 ZNF195-229ENST00000618467 440 ntTSL 5 BASIC3.07□□□□□ -1.92
LINC01558Q9Y6Z2 AC078909.2-201ENST00000620584 398 ntBASIC3.07□□□□□ -1.92
LINC01558Q9Y6Z2 AC018558.4-201ENST00000622153 281 ntBASIC3.07□□□□□ -1.92
LINC01558Q9Y6Z2 AC018692.2-201ENST00000624130 348 ntBASIC3.07□□□□□ -1.92
LINC01558Q9Y6Z2 RACK1-235ENST00000626067 564 ntTSL 2 BASIC3.07□□□□□ -1.92
LINC01558Q9Y6Z2 SCRN1-210ENST00000631335 423 ntTSL 5 BASIC3.07□□□□□ -1.92
LINC01558Q9Y6Z2 PIGA-209ENST00000634582 965 ntTSL 2 BASIC3.07□□□□□ -1.92
LINC01558Q9Y6Z2 GNPAT-201ENST00000366647 2643 ntAPPRIS P2 TSL 1 (best) BASIC3.07□□□□□ -1.92
LINC01558Q9Y6Z2 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
LINC01558Q9Y6Z2 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
LINC01558Q9Y6Z2 WASF5P-205ENST00000428639 1455 ntBASIC3.07□□□□□ -1.92
LINC01558Q9Y6Z2 AC099654.3-201ENST00000447087 1546 ntBASIC3.07□□□□□ -1.92
LINC01558Q9Y6Z2 BMP10-201ENST00000295379 1584 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
LINC01558Q9Y6Z2 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
LINC01558Q9Y6Z2 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC3.07□□□□□ -1.92
LINC01558Q9Y6Z2 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
LINC01558Q9Y6Z2 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC3.07□□□□□ -1.92
LINC01558Q9Y6Z2 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
LINC01558Q9Y6Z2 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
LINC01558Q9Y6Z2 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
LINC01558Q9Y6Z2 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
LINC01558Q9Y6Z2 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC3.07□□□□□ -1.92
LINC01558Q9Y6Z2 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
LINC01558Q9Y6Z2 DDX18P4-201ENST00000511690 1966 ntBASIC3.07□□□□□ -1.92
LINC01558Q9Y6Z2 MAPK6PS2-201ENST00000379571 2060 ntBASIC3.07□□□□□ -1.92
LINC01558Q9Y6Z2 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
LINC01558Q9Y6Z2 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC3.06□□□□□ -1.92
LINC01558Q9Y6Z2 AL592182.3-201ENST00000642132 3304 ntBASIC3.06□□□□□ -1.92
LINC01558Q9Y6Z2 SRBD1-201ENST00000263736 3681 ntAPPRIS P1 TSL 2 BASIC3.06□□□□□ -1.92
LINC01558Q9Y6Z2 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC3.06□□□□□ -1.92
LINC01558Q9Y6Z2 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC3.06□□□□□ -1.92
LINC01558Q9Y6Z2 OR10J6P-201ENST00000289731 930 ntBASIC3.06□□□□□ -1.92
LINC01558Q9Y6Z2 PIP-201ENST00000291009 585 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
LINC01558Q9Y6Z2 ATP5J2-201ENST00000292475 607 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
LINC01558Q9Y6Z2 PLGLB1-201ENST00000355705 1169 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
LINC01558Q9Y6Z2 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
LINC01558Q9Y6Z2 RNU1-94P-201ENST00000362627 173 ntBASIC3.06□□□□□ -1.92
LINC01558Q9Y6Z2 RN7SKP224-201ENST00000364140 325 ntBASIC3.06□□□□□ -1.92
LINC01558Q9Y6Z2 RNA5SP79-201ENST00000365193 109 ntBASIC3.06□□□□□ -1.92
LINC01558Q9Y6Z2 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
LINC01558Q9Y6Z2 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC3.06□□□□□ -1.92
LINC01558Q9Y6Z2 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
LINC01558Q9Y6Z2 MIR152-201ENST00000385212 87 ntBASIC3.06□□□□□ -1.92
LINC01558Q9Y6Z2 IGHV1-2-201ENST00000390594 417 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
LINC01558Q9Y6Z2 IGHV1-24-201ENST00000390610 411 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
LINC01558Q9Y6Z2 AL359715.1-201ENST00000404330 555 ntBASIC3.06□□□□□ -1.92
LINC01558Q9Y6Z2 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.06□□□□□ -1.92
LINC01558Q9Y6Z2 PLGLB1-202ENST00000409310 960 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
LINC01558Q9Y6Z2 EPPIN-203ENST00000409554 998 ntTSL 5 BASIC3.06□□□□□ -1.92
LINC01558Q9Y6Z2 AL031005.1-201ENST00000416959 723 ntTSL 3 BASIC3.06□□□□□ -1.92
LINC01558Q9Y6Z2 AC091492.1-201ENST00000419844 272 ntBASIC3.06□□□□□ -1.92
LINC01558Q9Y6Z2 RPL23AP85-201ENST00000421838 433 ntBASIC3.06□□□□□ -1.92
LINC01558Q9Y6Z2 STK33P1-201ENST00000423835 1218 ntBASIC3.06□□□□□ -1.92
LINC01558Q9Y6Z2 GPN3P1-201ENST00000423883 535 ntBASIC3.06□□□□□ -1.92
LINC01558Q9Y6Z2 TET1P1-201ENST00000426627 2301 ntBASIC3.06□□□□□ -1.92
LINC01558Q9Y6Z2 BLNK-204ENST00000427367 1284 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
LINC01558Q9Y6Z2 DDX11L10-201ENST00000430178 571 ntBASIC3.06□□□□□ -1.92
LINC01558Q9Y6Z2 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC3.06□□□□□ -1.92
LINC01558Q9Y6Z2 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC3.06□□□□□ -1.92
LINC01558Q9Y6Z2 AL136455.1-201ENST00000441083 1240 ntBASIC3.06□□□□□ -1.92
LINC01558Q9Y6Z2 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
LINC01558Q9Y6Z2 LINC02210-201ENST00000444561 288 ntBASIC3.06□□□□□ -1.92
LINC01558Q9Y6Z2 AL157392.2-201ENST00000449462 474 ntTSL 3 BASIC3.06□□□□□ -1.92
LINC01558Q9Y6Z2 AL354714.5-201ENST00000450131 590 ntBASIC3.06□□□□□ -1.92
LINC01558Q9Y6Z2 FGF12-206ENST00000450716 768 ntTSL 5 BASIC3.06□□□□□ -1.92
LINC01558Q9Y6Z2 AL354707.1-204ENST00000451142 846 ntTSL 2 BASIC3.06□□□□□ -1.92
LINC01558Q9Y6Z2 AC133965.1-201ENST00000452984 354 ntBASIC3.06□□□□□ -1.92
LINC01558Q9Y6Z2 TXNP3-201ENST00000454560 301 ntBASIC3.06□□□□□ -1.92
LINC01558Q9Y6Z2 TAAR4P-201ENST00000454843 1039 ntBASIC3.06□□□□□ -1.92
LINC01558Q9Y6Z2 AC097066.1-201ENST00000456878 683 ntTSL 5 BASIC3.06□□□□□ -1.92
LINC01558Q9Y6Z2 SNORD125-201ENST00000459538 96 ntBASIC3.06□□□□□ -1.92
LINC01558Q9Y6Z2 C9orf147-203ENST00000460965 446 ntTSL 3 BASIC3.06□□□□□ -1.92
LINC01558Q9Y6Z2 AC073594.1-201ENST00000462065 364 ntBASIC3.06□□□□□ -1.92
LINC01558Q9Y6Z2 AC135999.1-201ENST00000478962 479 ntBASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms