Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 ZNF350-201ENST00000243644 2338 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
SSU72Q9NP77 ERICH3-202ENST00000420661 2068 ntAPPRIS ALT2 TSL 1 (best) BASIC7.24□□□□□ -1.25
SSU72Q9NP77 LINC00310-204ENST00000430922 2086 ntTSL 2 BASIC7.24□□□□□ -1.25
SSU72Q9NP77 PABPC1P8-201ENST00000452851 2086 ntBASIC7.24□□□□□ -1.25
SSU72Q9NP77 CORIN-211ENST00000610355 4696 ntTSL 5 BASIC7.24□□□□□ -1.25
SSU72Q9NP77 MID1-202ENST00000380779 6044 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
SSU72Q9NP77 KCNA2-208ENST00000638616 3279 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
SSU72Q9NP77 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
SSU72Q9NP77 IKZF3-215ENST00000535189 1996 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
SSU72Q9NP77 GANC-201ENST00000318010 7781 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
SSU72Q9NP77 MID1-205ENST00000380785 6092 ntAPPRIS P1 TSL 2 BASIC7.24□□□□□ -1.25
SSU72Q9NP77 CU638689.4-201ENST00000623047 5990 ntTSL 5 BASIC7.24□□□□□ -1.25
SSU72Q9NP77 TXNIP-204ENST00000582401 2926 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
SSU72Q9NP77 FRMD5-211ENST00000618556 5059 ntTSL 5 BASIC7.24□□□□□ -1.25
SSU72Q9NP77 FAM111B-201ENST00000343597 3488 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
SSU72Q9NP77 CSDE1-218ENST00000610726 4312 ntTSL 5 BASIC7.23□□□□□ -1.25
SSU72Q9NP77 USP37-203ENST00000415516 4516 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
SSU72Q9NP77 DDX6-208ENST00000620157 6152 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
SSU72Q9NP77 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
SSU72Q9NP77 LRRC37A15P-201ENST00000514785 1355 ntBASIC7.23□□□□□ -1.25
SSU72Q9NP77 RNGTT-203ENST00000538899 1374 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
SSU72Q9NP77 CHST12-201ENST00000258711 15979 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
SSU72Q9NP77 PHLDB2-202ENST00000393925 5543 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
SSU72Q9NP77 APELA-202ENST00000507152 2602 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
SSU72Q9NP77 AC007382.1-201ENST00000624376 2618 ntBASIC7.23□□□□□ -1.25
SSU72Q9NP77 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC7.23□□□□□ -1.25
SSU72Q9NP77 SCN2A-215ENST00000637266 8610 ntAPPRIS ALT1 TSL 5 BASIC7.23□□□□□ -1.25
SSU72Q9NP77 FKBP5-202ENST00000536438 3940 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
SSU72Q9NP77 AC093909.4-201ENST00000514297 1991 ntTSL 5 BASIC7.23□□□□□ -1.25
SSU72Q9NP77 AMELY-201ENST00000215479 802 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
SSU72Q9NP77 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
SSU72Q9NP77 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
SSU72Q9NP77 RNA5SP79-201ENST00000365193 109 ntBASIC7.23□□□□□ -1.25
SSU72Q9NP77 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC7.23□□□□□ -1.25
SSU72Q9NP77 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC7.23□□□□□ -1.25
SSU72Q9NP77 KCNAB1-202ENST00000389634 1119 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
SSU72Q9NP77 RNU6-1320P-201ENST00000390838 107 ntBASIC7.23□□□□□ -1.25
SSU72Q9NP77 Y_RNA.578-201ENST00000390903 88 ntBASIC7.23□□□□□ -1.25
SSU72Q9NP77 RNU6-1269P-201ENST00000391139 107 ntBASIC7.23□□□□□ -1.25
SSU72Q9NP77 AC074254.1-201ENST00000399152 404 ntTSL 5 BASIC7.23□□□□□ -1.25
SSU72Q9NP77 AC004009.1-201ENST00000412413 567 ntTSL 5 BASIC7.23□□□□□ -1.25
SSU72Q9NP77 P2RY10P2-201ENST00000416730 913 ntBASIC7.23□□□□□ -1.25
SSU72Q9NP77 Z93930.2-202ENST00000418292 208 ntTSL 3 BASIC7.23□□□□□ -1.25
SSU72Q9NP77 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC7.23□□□□□ -1.25
SSU72Q9NP77 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC7.23□□□□□ -1.25
SSU72Q9NP77 SLIT1-AS1-201ENST00000424428 689 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
SSU72Q9NP77 AL365220.1-201ENST00000432923 399 ntBASIC7.23□□□□□ -1.25
SSU72Q9NP77 MTND1P32-201ENST00000433043 938 ntBASIC7.23□□□□□ -1.25
SSU72Q9NP77 AL731892.1-201ENST00000437364 1192 ntBASIC7.23□□□□□ -1.25
SSU72Q9NP77 AL159174.1-201ENST00000438267 811 ntTSL 3 BASIC7.23□□□□□ -1.25
SSU72Q9NP77 MTATP6P13-201ENST00000438531 667 ntBASIC7.23□□□□□ -1.25
SSU72Q9NP77 RPS27P5-201ENST00000444247 244 ntBASIC7.23□□□□□ -1.25
SSU72Q9NP77 AL627224.1-201ENST00000448334 444 ntBASIC7.23□□□□□ -1.25
SSU72Q9NP77 SENP1-201ENST00000448372 4679 ntAPPRIS P2 TSL 1 (best) BASIC7.23□□□□□ -1.25
SSU72Q9NP77 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC7.23□□□□□ -1.25
SSU72Q9NP77 RNU6-599P-201ENST00000459383 107 ntBASIC7.23□□□□□ -1.25
SSU72Q9NP77 RNU6-1193P-201ENST00000459461 107 ntBASIC7.23□□□□□ -1.25
SSU72Q9NP77 AC139451.1-201ENST00000463176 330 ntBASIC7.23□□□□□ -1.25
SSU72Q9NP77 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
SSU72Q9NP77 RN7SL88P-201ENST00000480166 299 ntBASIC7.23□□□□□ -1.25
SSU72Q9NP77 AC096743.1-201ENST00000485172 319 ntBASIC7.23□□□□□ -1.25
SSU72Q9NP77 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC7.23□□□□□ -1.25
SSU72Q9NP77 AC008837.1-201ENST00000511513 412 ntBASIC7.23□□□□□ -1.25
SSU72Q9NP77 OR10J9P-201ENST00000511932 987 ntBASIC7.23□□□□□ -1.25
SSU72Q9NP77 AC092435.1-202ENST00000512752 518 ntTSL 3 BASIC7.23□□□□□ -1.25
SSU72Q9NP77 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC7.23□□□□□ -1.25
SSU72Q9NP77 MTND4LP26-201ENST00000518144 282 ntBASIC7.23□□□□□ -1.25
SSU72Q9NP77 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC7.23□□□□□ -1.25
SSU72Q9NP77 RPL10P19-203ENST00000522289 663 ntTSL 3 BASIC7.23□□□□□ -1.25
SSU72Q9NP77 AP001767.2-201ENST00000527291 382 ntBASIC7.23□□□□□ -1.25
SSU72Q9NP77 OR9L1P-201ENST00000529493 933 ntBASIC7.23□□□□□ -1.25
SSU72Q9NP77 LRTOMT-212ENST00000536917 579 ntTSL 3 BASIC7.23□□□□□ -1.25
SSU72Q9NP77 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC7.23□□□□□ -1.25
SSU72Q9NP77 AC126177.6-201ENST00000550420 1009 ntBASIC7.23□□□□□ -1.25
SSU72Q9NP77 CRADD-210ENST00000552033 622 ntTSL 3 BASIC7.23□□□□□ -1.25
SSU72Q9NP77 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC7.23□□□□□ -1.25
SSU72Q9NP77 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC7.23□□□□□ -1.25
SSU72Q9NP77 AC093524.1-201ENST00000564266 1094 ntBASIC7.23□□□□□ -1.25
SSU72Q9NP77 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC7.23□□□□□ -1.25
SSU72Q9NP77 AC015853.3-201ENST00000570974 478 ntTSL 4 BASIC7.23□□□□□ -1.25
SSU72Q9NP77 MIR3915-201ENST00000578518 97 ntBASIC7.23□□□□□ -1.25
SSU72Q9NP77 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC7.23□□□□□ -1.25
SSU72Q9NP77 AC008759.2-201ENST00000585880 600 ntTSL 5 BASIC7.23□□□□□ -1.25
SSU72Q9NP77 AP001269.3-201ENST00000588718 329 ntBASIC7.23□□□□□ -1.25
SSU72Q9NP77 LINC00674-202ENST00000590734 160 ntBASIC7.23□□□□□ -1.25
SSU72Q9NP77 MIR205HG-210ENST00000603283 455 ntTSL 3 BASIC7.23□□□□□ -1.25
SSU72Q9NP77 AC106791.2-201ENST00000604680 391 ntBASIC7.23□□□□□ -1.25
SSU72Q9NP77 AC005377.1-201ENST00000605126 456 ntBASIC7.23□□□□□ -1.25
SSU72Q9NP77 AC009237.15-201ENST00000610252 501 ntBASIC7.23□□□□□ -1.25
SSU72Q9NP77 STARD13-AS-247ENST00000610879 779 ntTSL 5 BASIC7.23□□□□□ -1.25
SSU72Q9NP77 AC025588.4-201ENST00000615802 908 ntBASIC7.23□□□□□ -1.25
SSU72Q9NP77 U6.42-201ENST00000618440 107 ntBASIC7.23□□□□□ -1.25
SSU72Q9NP77 AC010320.5-201ENST00000619124 676 ntBASIC7.23□□□□□ -1.25
SSU72Q9NP77 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
SSU72Q9NP77 AL035661.1-201ENST00000620459 1144 ntBASIC7.23□□□□□ -1.25
SSU72Q9NP77 RNU6-368P-201ENST00000620928 107 ntBASIC7.23□□□□□ -1.25
SSU72Q9NP77 AL590240.3-201ENST00000621416 943 ntBASIC7.23□□□□□ -1.25
SSU72Q9NP77 RNU6-538P-201ENST00000622329 107 ntBASIC7.23□□□□□ -1.25
SSU72Q9NP77 LINC00466-206ENST00000634576 1279 ntTSL 5 BASIC7.23□□□□□ -1.25
SSU72Q9NP77 ZNF711-202ENST00000360700 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 93.3 ms