Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 AC036214.3-201ENST00000522938 1527 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.42
SNX18Q96RF0 BLNK-203ENST00000413476 1599 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
SNX18Q96RF0 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
SNX18Q96RF0 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC6.15□□□□□ -1.42
SNX18Q96RF0 ADGRB3-203ENST00000546190 4569 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
SNX18Q96RF0 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
SNX18Q96RF0 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
SNX18Q96RF0 RPS7-201ENST00000304921 786 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
SNX18Q96RF0 AC107977.1-201ENST00000355745 939 ntBASIC6.15□□□□□ -1.42
SNX18Q96RF0 PPIAP26-201ENST00000377951 522 ntBASIC6.15□□□□□ -1.42
SNX18Q96RF0 RFPL3S-201ENST00000382084 1117 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
SNX18Q96RF0 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
SNX18Q96RF0 AL589994.1-201ENST00000404962 340 ntBASIC6.15□□□□□ -1.42
SNX18Q96RF0 RN7SKP148-201ENST00000410179 275 ntBASIC6.15□□□□□ -1.42
SNX18Q96RF0 AL157932.1-201ENST00000413246 363 ntTSL 3 BASIC6.15□□□□□ -1.42
SNX18Q96RF0 LINC01497-201ENST00000420427 665 ntTSL 3 BASIC6.15□□□□□ -1.42
SNX18Q96RF0 EIF4A1P2-201ENST00000422633 1220 ntBASIC6.15□□□□□ -1.42
SNX18Q96RF0 ZBTB8OSP2-201ENST00000423890 504 ntBASIC6.15□□□□□ -1.42
SNX18Q96RF0 RPL7AP14-201ENST00000424041 802 ntBASIC6.15□□□□□ -1.42
SNX18Q96RF0 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC6.15□□□□□ -1.42
SNX18Q96RF0 AL513303.1-201ENST00000432452 591 ntTSL 2 BASIC6.15□□□□□ -1.42
SNX18Q96RF0 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC6.15□□□□□ -1.42
SNX18Q96RF0 MYL6P3-201ENST00000436904 432 ntBASIC6.15□□□□□ -1.42
SNX18Q96RF0 OSTCP2-201ENST00000437956 444 ntBASIC6.15□□□□□ -1.42
SNX18Q96RF0 AL445465.1-204ENST00000440220 447 ntTSL 3 BASIC6.15□□□□□ -1.42
SNX18Q96RF0 RPL29P7-201ENST00000440227 457 ntBASIC6.15□□□□□ -1.42
SNX18Q96RF0 DPP10-AS1-202ENST00000448663 644 ntTSL 3 BASIC6.15□□□□□ -1.42
SNX18Q96RF0 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC6.15□□□□□ -1.42
SNX18Q96RF0 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC6.15□□□□□ -1.42
SNX18Q96RF0 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC6.15□□□□□ -1.42
SNX18Q96RF0 AC108751.3-201ENST00000461814 1020 ntBASIC6.15□□□□□ -1.42
SNX18Q96RF0 AP000805.1-201ENST00000471604 784 ntBASIC6.15□□□□□ -1.42
SNX18Q96RF0 ZNF525-204ENST00000491101 569 ntTSL 4 BASIC6.15□□□□□ -1.42
SNX18Q96RF0 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC6.15□□□□□ -1.42
SNX18Q96RF0 AC097494.1-201ENST00000512898 732 ntTSL 3 BASIC6.15□□□□□ -1.42
SNX18Q96RF0 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC6.15□□□□□ -1.42
SNX18Q96RF0 EGFLAM-211ENST00000514476 676 ntTSL 2 BASIC6.15□□□□□ -1.42
SNX18Q96RF0 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC6.15□□□□□ -1.42
SNX18Q96RF0 AC087752.2-201ENST00000521219 281 ntBASIC6.15□□□□□ -1.42
SNX18Q96RF0 AP001646.2-201ENST00000528645 1156 ntBASIC6.15□□□□□ -1.42
SNX18Q96RF0 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC6.15□□□□□ -1.42
SNX18Q96RF0 DCN-215ENST00000550099 719 ntTSL 2 BASIC6.15□□□□□ -1.42
SNX18Q96RF0 FLVCR2-204ENST00000553587 584 ntTSL 2 BASIC6.15□□□□□ -1.42
SNX18Q96RF0 LINC02310-201ENST00000556762 572 ntTSL 4 BASIC6.15□□□□□ -1.42
SNX18Q96RF0 AC018767.3-201ENST00000564185 481 ntTSL 3 BASIC6.15□□□□□ -1.42
SNX18Q96RF0 AC027216.1-201ENST00000577726 685 ntBASIC6.15□□□□□ -1.42
SNX18Q96RF0 MIR378H-201ENST00000579966 83 ntBASIC6.15□□□□□ -1.42
SNX18Q96RF0 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC6.15□□□□□ -1.42
SNX18Q96RF0 AC006116.7-201ENST00000590141 756 ntBASIC6.15□□□□□ -1.42
SNX18Q96RF0 AL161457.2-206ENST00000592778 802 ntTSL 5 BASIC6.15□□□□□ -1.42
SNX18Q96RF0 AL121782.1-201ENST00000611242 413 ntBASIC6.15□□□□□ -1.42
SNX18Q96RF0 AC010333.3-201ENST00000615100 402 ntBASIC6.15□□□□□ -1.42
SNX18Q96RF0 ALKAL2-208ENST00000619265 496 ntTSL 2 BASIC6.15□□□□□ -1.42
SNX18Q96RF0 AL445493.3-201ENST00000619568 477 ntBASIC6.15□□□□□ -1.42
SNX18Q96RF0 AC074276.2-201ENST00000619891 348 ntBASIC6.15□□□□□ -1.42
SNX18Q96RF0 Six3os1_1.1-201ENST00000620900 87 ntBASIC6.15□□□□□ -1.42
SNX18Q96RF0 AC025287.2-201ENST00000621911 668 ntBASIC6.15□□□□□ -1.42
SNX18Q96RF0 ZRANB2-AS2-220ENST00000623721 1133 ntTSL 5 BASIC6.15□□□□□ -1.42
SNX18Q96RF0 AC106782.7-201ENST00000624024 418 ntBASIC6.15□□□□□ -1.42
SNX18Q96RF0 AC133555.5-201ENST00000624430 418 ntBASIC6.15□□□□□ -1.42
SNX18Q96RF0 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
SNX18Q96RF0 SSX7-201ENST00000298181 1311 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.43
SNX18Q96RF0 ZMAT1-206ENST00000540921 3139 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.43
SNX18Q96RF0 TCF4-225ENST00000564999 3590 ntAPPRIS P3 TSL 5 BASIC6.15□□□□□ -1.43
SNX18Q96RF0 AC107884.1-202ENST00000622955 2703 ntTSL 5 BASIC6.15□□□□□ -1.43
SNX18Q96RF0 AC093844.1-201ENST00000514910 1361 ntBASIC6.15□□□□□ -1.43
SNX18Q96RF0 FGFR2-205ENST00000357555 3690 ntTSL 2 BASIC6.15□□□□□ -1.43
SNX18Q96RF0 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC6.15□□□□□ -1.43
SNX18Q96RF0 NIN-204ENST00000382043 4216 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
SNX18Q96RF0 DDX6P1-205ENST00000441966 1436 ntBASIC6.15□□□□□ -1.43
SNX18Q96RF0 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
SNX18Q96RF0 ESRRG-212ENST00000463665 3359 ntTSL 2 BASIC6.15□□□□□ -1.43
SNX18Q96RF0 Z97989.1-201ENST00000531702 2421 ntBASIC6.15□□□□□ -1.43
SNX18Q96RF0 MAP3K19-206ENST00000392918 1460 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
SNX18Q96RF0 CDH19-203ENST00000540086 1963 ntTSL 2 BASIC6.15□□□□□ -1.43
SNX18Q96RF0 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.43
SNX18Q96RF0 AC102941.1-201ENST00000567616 1537 ntBASIC6.15□□□□□ -1.43
SNX18Q96RF0 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
SNX18Q96RF0 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
SNX18Q96RF0 DOCK11P1-201ENST00000553480 5932 ntBASIC6.14□□□□□ -1.43
SNX18Q96RF0 CDY19P-201ENST00000411668 1613 ntBASIC6.14□□□□□ -1.43
SNX18Q96RF0 CDY18P-201ENST00000438294 1609 ntBASIC6.14□□□□□ -1.43
SNX18Q96RF0 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC6.14□□□□□ -1.43
SNX18Q96RF0 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
SNX18Q96RF0 TTI1-202ENST00000373448 3958 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
SNX18Q96RF0 LINC00922-203ENST00000569736 1760 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
SNX18Q96RF0 AL391704.1-201ENST00000422206 2368 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
SNX18Q96RF0 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
SNX18Q96RF0 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
SNX18Q96RF0 ARHGAP21-201ENST00000320481 4343 ntTSL 5 BASIC6.14□□□□□ -1.43
SNX18Q96RF0 OR7D4-202ENST00000641244 4968 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
SNX18Q96RF0 STK3-216ENST00000523601 3107 ntTSL 2 BASIC6.14□□□□□ -1.43
SNX18Q96RF0 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
SNX18Q96RF0 OR4K1-201ENST00000285600 1076 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
SNX18Q96RF0 RAET1L-201ENST00000286380 802 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
SNX18Q96RF0 OR5A1-201ENST00000302030 1051 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
SNX18Q96RF0 STAG3L4-201ENST00000352103 530 ntBASIC6.14□□□□□ -1.43
SNX18Q96RF0 RNA5SP65-201ENST00000363166 119 ntBASIC6.14□□□□□ -1.43
SNX18Q96RF0 SNORA70.5-201ENST00000365519 135 ntBASIC6.14□□□□□ -1.43
SNX18Q96RF0 SPRR2D-202ENST00000368756 788 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 65.7 ms