Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 HTR1DP1-201ENST00000616500 888 ntBASIC5.66□□□□□ -1.5
LRRC28Q86X40 AC005277.2-201ENST00000617898 390 ntBASIC5.66□□□□□ -1.5
LRRC28Q86X40 AC061999.1-201ENST00000624454 177 ntBASIC5.66□□□□□ -1.5
LRRC28Q86X40 CLUHP10-201ENST00000631979 980 ntBASIC5.66□□□□□ -1.5
LRRC28Q86X40 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
LRRC28Q86X40 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
LRRC28Q86X40 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
LRRC28Q86X40 CYP4A22-206ENST00000619754 2351 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
LRRC28Q86X40 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
LRRC28Q86X40 NSF-206ENST00000575068 2667 ntTSL 2 BASIC5.66□□□□□ -1.5
LRRC28Q86X40 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC5.66□□□□□ -1.5
LRRC28Q86X40 AC027575.3-201ENST00000583058 2747 ntBASIC5.66□□□□□ -1.5
LRRC28Q86X40 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
LRRC28Q86X40 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
LRRC28Q86X40 AC010132.4-201ENST00000569883 1368 ntBASIC5.66□□□□□ -1.5
LRRC28Q86X40 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC5.66□□□□□ -1.5
LRRC28Q86X40 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
LRRC28Q86X40 PLEKHA5-216ENST00000540972 1954 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
LRRC28Q86X40 TDRD1-201ENST00000251864 4510 ntAPPRIS P2 TSL 1 (best) BASIC5.66□□□□□ -1.5
LRRC28Q86X40 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
LRRC28Q86X40 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
LRRC28Q86X40 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
LRRC28Q86X40 ZNF426-202ENST00000535489 2375 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.5
LRRC28Q86X40 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
LRRC28Q86X40 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
LRRC28Q86X40 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.5
LRRC28Q86X40 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
LRRC28Q86X40 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
LRRC28Q86X40 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
LRRC28Q86X40 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
LRRC28Q86X40 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
LRRC28Q86X40 LCP2-206ENST00000521416 1599 ntTSL 2 BASIC5.65□□□□□ -1.5
LRRC28Q86X40 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
LRRC28Q86X40 IFNK-201ENST00000276943 1140 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
LRRC28Q86X40 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC5.65□□□□□ -1.5
LRRC28Q86X40 AC007562.1-201ENST00000421819 517 ntBASIC5.65□□□□□ -1.5
LRRC28Q86X40 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC5.65□□□□□ -1.5
LRRC28Q86X40 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC5.65□□□□□ -1.5
LRRC28Q86X40 OR5W1P-201ENST00000423705 938 ntBASIC5.65□□□□□ -1.5
LRRC28Q86X40 VN1R53P-201ENST00000429536 957 ntBASIC5.65□□□□□ -1.5
LRRC28Q86X40 RPEP4-201ENST00000437636 602 ntBASIC5.65□□□□□ -1.5
LRRC28Q86X40 ATP6V1G1P4-201ENST00000438388 335 ntBASIC5.65□□□□□ -1.5
LRRC28Q86X40 AP006216.1-201ENST00000439104 419 ntTSL 3 BASIC5.65□□□□□ -1.5
LRRC28Q86X40 AL445623.1-201ENST00000440888 237 ntTSL 3 BASIC5.65□□□□□ -1.5
LRRC28Q86X40 HCG14-201ENST00000444986 413 ntTSL 2 BASIC5.65□□□□□ -1.5
LRRC28Q86X40 AC023274.2-201ENST00000445264 521 ntBASIC5.65□□□□□ -1.5
LRRC28Q86X40 LIX1L-AS1-206ENST00000447686 846 ntTSL 2 BASIC5.65□□□□□ -1.5
LRRC28Q86X40 RN7SL221P-201ENST00000466190 281 ntBASIC5.65□□□□□ -1.5
LRRC28Q86X40 GPX6-202ENST00000474923 716 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
LRRC28Q86X40 AC091849.1-201ENST00000509920 121 ntBASIC5.65□□□□□ -1.5
LRRC28Q86X40 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC5.65□□□□□ -1.5
LRRC28Q86X40 AC010834.1-201ENST00000517998 696 ntTSL 2 BASIC5.65□□□□□ -1.5
LRRC28Q86X40 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
LRRC28Q86X40 AP001831.1-201ENST00000524610 411 ntTSL 3 BASIC5.65□□□□□ -1.5
LRRC28Q86X40 SLC14A1-206ENST00000535474 1048 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
LRRC28Q86X40 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC5.65□□□□□ -1.5
LRRC28Q86X40 LINC02392-202ENST00000549313 574 ntTSL 4 BASIC5.65□□□□□ -1.5
LRRC28Q86X40 AL121579.2-201ENST00000555466 590 ntBASIC5.65□□□□□ -1.5
LRRC28Q86X40 CNEP1R1-204ENST00000562576 656 ntTSL 5 BASIC5.65□□□□□ -1.5
LRRC28Q86X40 MDFIC2-201ENST00000567252 778 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
LRRC28Q86X40 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC5.65□□□□□ -1.5
LRRC28Q86X40 AC087392.1-201ENST00000576252 820 ntTSL 2 BASIC5.65□□□□□ -1.5
LRRC28Q86X40 AC007923.1-201ENST00000577970 505 ntTSL 4 BASIC5.65□□□□□ -1.5
LRRC28Q86X40 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
LRRC28Q86X40 AL136084.2-222ENST00000589105 885 ntTSL 5 BASIC5.65□□□□□ -1.5
LRRC28Q86X40 AC040963.1-201ENST00000591900 564 ntTSL 4 BASIC5.65□□□□□ -1.5
LRRC28Q86X40 PRL-202ENST00000615510 1268 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
LRRC28Q86X40 AC211486.4-201ENST00000621495 113 ntBASIC5.65□□□□□ -1.5
LRRC28Q86X40 MIR6813-201ENST00000621638 56 ntBASIC5.65□□□□□ -1.5
LRRC28Q86X40 LINC01440-210ENST00000629744 541 ntTSL 5 BASIC5.65□□□□□ -1.5
LRRC28Q86X40 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.51
LRRC28Q86X40 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
LRRC28Q86X40 LYPD6B-202ENST00000409029 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.51
LRRC28Q86X40 AC044839.1-206ENST00000635559 1324 ntTSL 5 BASIC5.65□□□□□ -1.51
LRRC28Q86X40 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC5.65□□□□□ -1.51
LRRC28Q86X40 AL391704.1-201ENST00000422206 2368 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
LRRC28Q86X40 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC5.65□□□□□ -1.51
LRRC28Q86X40 USP9YP3-201ENST00000434481 1766 ntBASIC5.65□□□□□ -1.51
LRRC28Q86X40 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC5.65□□□□□ -1.51
LRRC28Q86X40 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
LRRC28Q86X40 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.51
LRRC28Q86X40 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
LRRC28Q86X40 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
LRRC28Q86X40 GABRA2-215ENST00000540012 2588 ntTSL 5 BASIC5.64□□□□□ -1.51
LRRC28Q86X40 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
LRRC28Q86X40 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
LRRC28Q86X40 BIN2P1-201ENST00000504996 1530 ntBASIC5.64□□□□□ -1.51
LRRC28Q86X40 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
LRRC28Q86X40 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
LRRC28Q86X40 IMPA1-202ENST00000311489 1106 ntTSL 2 BASIC5.64□□□□□ -1.51
LRRC28Q86X40 ZNF66-202ENST00000360204 1120 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
LRRC28Q86X40 RNA5SP321-201ENST00000362722 111 ntBASIC5.64□□□□□ -1.51
LRRC28Q86X40 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC5.64□□□□□ -1.51
LRRC28Q86X40 AL138828.1-204ENST00000413745 898 ntTSL 5 BASIC5.64□□□□□ -1.51
LRRC28Q86X40 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC5.64□□□□□ -1.51
LRRC28Q86X40 AL161793.1-201ENST00000435021 445 ntTSL 3 BASIC5.64□□□□□ -1.51
LRRC28Q86X40 PFN1P11-201ENST00000445829 389 ntBASIC5.64□□□□□ -1.51
LRRC28Q86X40 AKR1D1P1-201ENST00000457236 936 ntBASIC5.64□□□□□ -1.51
LRRC28Q86X40 RN7SL393P-201ENST00000463588 296 ntBASIC5.64□□□□□ -1.51
LRRC28Q86X40 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC5.64□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 158.3 ms