Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 INTS12-202ENST00000394735 1927 ntTSL 5 BASIC6.12□□□□□ -1.43
RIF1Q5UIP0 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
RIF1Q5UIP0 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
RIF1Q5UIP0 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC6.12□□□□□ -1.43
RIF1Q5UIP0 JAZF1-201ENST00000283928 3125 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
RIF1Q5UIP0 SYT4-201ENST00000255224 4110 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
RIF1Q5UIP0 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
RIF1Q5UIP0 CTNND1-221ENST00000529873 5931 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
RIF1Q5UIP0 PPFIBP1-202ENST00000318304 6001 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
RIF1Q5UIP0 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
RIF1Q5UIP0 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
RIF1Q5UIP0 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
RIF1Q5UIP0 AC004870.2-202ENST00000423781 706 ntTSL 3 BASIC6.12□□□□□ -1.43
RIF1Q5UIP0 AC068759.1-201ENST00000447709 470 ntTSL 5 BASIC6.12□□□□□ -1.43
RIF1Q5UIP0 RPL15P21-201ENST00000495592 567 ntBASIC6.12□□□□□ -1.43
RIF1Q5UIP0 RN7SL808P-201ENST00000496066 299 ntBASIC6.12□□□□□ -1.43
RIF1Q5UIP0 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC6.12□□□□□ -1.43
RIF1Q5UIP0 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC6.12□□□□□ -1.43
RIF1Q5UIP0 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC6.12□□□□□ -1.43
RIF1Q5UIP0 LINC02341-202ENST00000637462 1295 ntTSL 5 BASIC6.12□□□□□ -1.43
RIF1Q5UIP0 BRD8-201ENST00000230901 3198 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
RIF1Q5UIP0 AC008555.1-201ENST00000561778 2757 ntBASIC6.12□□□□□ -1.43
RIF1Q5UIP0 TLR10-202ENST00000361424 3484 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
RIF1Q5UIP0 AC027088.4-201ENST00000611559 1947 ntBASIC6.12□□□□□ -1.43
RIF1Q5UIP0 NLGN4X-204ENST00000381095 5870 ntAPPRIS P2 TSL 1 (best) BASIC6.12□□□□□ -1.43
RIF1Q5UIP0 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC6.12□□□□□ -1.43
RIF1Q5UIP0 NAV2-202ENST00000360655 10667 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
RIF1Q5UIP0 CBR4-201ENST00000306193 3443 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
RIF1Q5UIP0 ZNF846-202ENST00000586293 1621 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
RIF1Q5UIP0 MED28-201ENST00000237380 10868 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
RIF1Q5UIP0 ADGRE3-201ENST00000253673 2254 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
RIF1Q5UIP0 CFAP61-203ENST00000377293 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
RIF1Q5UIP0 CYCSP52-201ENST00000422857 310 ntBASIC6.11□□□□□ -1.43
RIF1Q5UIP0 OR13C7-201ENST00000424348 959 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
RIF1Q5UIP0 AC005033.1-201ENST00000428904 813 ntBASIC6.11□□□□□ -1.43
RIF1Q5UIP0 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC6.11□□□□□ -1.43
RIF1Q5UIP0 RN7SL172P-201ENST00000460535 303 ntBASIC6.11□□□□□ -1.43
RIF1Q5UIP0 RPS14P8-201ENST00000478778 369 ntBASIC6.11□□□□□ -1.43
RIF1Q5UIP0 AC006487.2-201ENST00000503624 577 ntTSL 4 BASIC6.11□□□□□ -1.43
RIF1Q5UIP0 AC138866.2-201ENST00000508650 584 ntBASIC6.11□□□□□ -1.43
RIF1Q5UIP0 PCNAP4-201ENST00000532690 730 ntBASIC6.11□□□□□ -1.43
RIF1Q5UIP0 AC084816.1-202ENST00000536744 647 ntTSL 2 BASIC6.11□□□□□ -1.43
RIF1Q5UIP0 AP001823.1-201ENST00000604056 1003 ntBASIC6.11□□□□□ -1.43
RIF1Q5UIP0 GULP1-203ENST00000409609 1932 ntAPPRIS P3 TSL 2 BASIC6.11□□□□□ -1.43
RIF1Q5UIP0 SAR1A-202ENST00000373238 3227 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
RIF1Q5UIP0 Z93929.1-201ENST00000418200 1475 ntBASIC6.11□□□□□ -1.43
RIF1Q5UIP0 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC6.11□□□□□ -1.43
RIF1Q5UIP0 UTY-212ENST00000545955 6817 ntAPPRIS P5 TSL 1 (best) BASIC6.11□□□□□ -1.43
RIF1Q5UIP0 CDY7P-201ENST00000429883 1604 ntBASIC6.11□□□□□ -1.43
RIF1Q5UIP0 TSHZ2-203ENST00000603338 3803 ntTSL 2 BASIC6.11□□□□□ -1.43
RIF1Q5UIP0 ZNF83-205ENST00000594682 2890 ntTSL 4 BASIC6.11□□□□□ -1.43
RIF1Q5UIP0 C1orf162-202ENST00000369718 915 ntAPPRIS ALT2 TSL 2 BASIC6.11□□□□□ -1.43
RIF1Q5UIP0 CYB5AP4-201ENST00000396692 399 ntBASIC6.11□□□□□ -1.43
RIF1Q5UIP0 AC016397.1-201ENST00000412463 242 ntBASIC6.11□□□□□ -1.43
RIF1Q5UIP0 SEPT14P12-201ENST00000442280 560 ntBASIC6.11□□□□□ -1.43
RIF1Q5UIP0 GLRXP3-201ENST00000470810 321 ntBASIC6.11□□□□□ -1.43
RIF1Q5UIP0 OR2AO1P-201ENST00000476497 403 ntBASIC6.11□□□□□ -1.43
RIF1Q5UIP0 BX510359.5-201ENST00000515651 304 ntBASIC6.11□□□□□ -1.43
RIF1Q5UIP0 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC6.11□□□□□ -1.43
RIF1Q5UIP0 GMFG-212ENST00000602185 423 ntTSL 3 BASIC6.11□□□□□ -1.43
RIF1Q5UIP0 AL356986.1-201ENST00000604085 341 ntBASIC6.11□□□□□ -1.43
RIF1Q5UIP0 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC6.11□□□□□ -1.43
RIF1Q5UIP0 NCOA6-202ENST00000374796 9311 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
RIF1Q5UIP0 HERC4-211ENST00000492996 3385 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
RIF1Q5UIP0 SAGE3P-201ENST00000619800 1635 ntBASIC6.11□□□□□ -1.43
RIF1Q5UIP0 OR1C1-201ENST00000408896 1307 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
RIF1Q5UIP0 SLF2-202ENST00000370269 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
RIF1Q5UIP0 ADGRB3-201ENST00000238918 2927 ntTSL 2 BASIC6.11□□□□□ -1.43
RIF1Q5UIP0 AC110597.1-201ENST00000562669 3176 ntBASIC6.1□□□□□ -1.43
RIF1Q5UIP0 AL356967.1-201ENST00000406305 431 ntBASIC6.1□□□□□ -1.43
RIF1Q5UIP0 RPL35AP31-201ENST00000418340 337 ntBASIC6.1□□□□□ -1.43
RIF1Q5UIP0 CNOT7P2-201ENST00000441051 832 ntBASIC6.1□□□□□ -1.43
RIF1Q5UIP0 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
RIF1Q5UIP0 RN7SL57P-201ENST00000493687 290 ntBASIC6.1□□□□□ -1.43
RIF1Q5UIP0 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
RIF1Q5UIP0 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC6.1□□□□□ -1.43
RIF1Q5UIP0 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC6.1□□□□□ -1.43
RIF1Q5UIP0 OR8G3P-201ENST00000533406 921 ntBASIC6.1□□□□□ -1.43
RIF1Q5UIP0 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC6.1□□□□□ -1.43
RIF1Q5UIP0 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC6.1□□□□□ -1.43
RIF1Q5UIP0 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC6.1□□□□□ -1.43
RIF1Q5UIP0 AC005332.4-201ENST00000592752 579 ntBASIC6.1□□□□□ -1.43
RIF1Q5UIP0 SIRPG-AS1-202ENST00000456177 2795 ntTSL 2 BASIC6.1□□□□□ -1.43
RIF1Q5UIP0 CYP4F30P-203ENST00000438109 2250 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
RIF1Q5UIP0 CHD8-201ENST00000399982 8229 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
RIF1Q5UIP0 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
RIF1Q5UIP0 CLUL1-201ENST00000338387 1897 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
RIF1Q5UIP0 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC6.1□□□□□ -1.43
RIF1Q5UIP0 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC6.1□□□□□ -1.43
RIF1Q5UIP0 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
RIF1Q5UIP0 KAT6A-201ENST00000265713 9153 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
RIF1Q5UIP0 AL353743.3-201ENST00000442109 1468 ntBASIC6.1□□□□□ -1.43
RIF1Q5UIP0 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC6.1□□□□□ -1.43
RIF1Q5UIP0 KLHL2-209ENST00000514860 2442 ntAPPRIS ALT2 TSL 2 BASIC6.1□□□□□ -1.43
RIF1Q5UIP0 NF1-201ENST00000356175 12362 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
RIF1Q5UIP0 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
RIF1Q5UIP0 MIR223-201ENST00000385204 110 ntBASIC6.1□□□□□ -1.43
RIF1Q5UIP0 LMCD1-AS1-202ENST00000439407 576 ntTSL 4 BASIC6.1□□□□□ -1.43
RIF1Q5UIP0 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC6.1□□□□□ -1.43
RIF1Q5UIP0 AC002553.3-201ENST00000453002 341 ntBASIC6.1□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 72.9 ms