Protein–RNA interactions for Protein: P18858

LIG1, DNA ligase 1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1P18858 HNRNPCP8-201ENST00000528764 888 ntBASIC8.08□□□□□ -1.12
LIG1P18858 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC8.08□□□□□ -1.12
LIG1P18858 AC011595.1-201ENST00000548901 753 ntTSL 3 BASIC8.08□□□□□ -1.12
LIG1P18858 LINC01146-203ENST00000555996 459 ntTSL 2 BASIC8.08□□□□□ -1.12
LIG1P18858 NR2F2-AS1-205ENST00000559505 1005 ntTSL 5 BASIC8.08□□□□□ -1.12
LIG1P18858 AC007950.1-201ENST00000560465 615 ntTSL 3 BASIC8.08□□□□□ -1.12
LIG1P18858 AGGF1P9-201ENST00000561884 913 ntBASIC8.08□□□□□ -1.12
LIG1P18858 MED31-202ENST00000574128 619 ntTSL 3 BASIC8.08□□□□□ -1.12
LIG1P18858 MIR1273F-201ENST00000580581 99 ntBASIC8.08□□□□□ -1.12
LIG1P18858 RN7SL657P-201ENST00000582431 293 ntBASIC8.08□□□□□ -1.12
LIG1P18858 AC068254.1-201ENST00000584753 483 ntTSL 3 BASIC8.08□□□□□ -1.12
LIG1P18858 AC011476.3-203ENST00000586961 346 ntTSL 5 BASIC8.08□□□□□ -1.12
LIG1P18858 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC8.08□□□□□ -1.12
LIG1P18858 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC8.08□□□□□ -1.12
LIG1P18858 Z99497.2-201ENST00000603634 310 ntBASIC8.08□□□□□ -1.12
LIG1P18858 AL139123.1-201ENST00000612008 430 ntBASIC8.08□□□□□ -1.12
LIG1P18858 AC241377.2-201ENST00000612313 553 ntTSL 4 BASIC8.08□□□□□ -1.12
LIG1P18858 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC8.08□□□□□ -1.12
LIG1P18858 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC8.08□□□□□ -1.12
LIG1P18858 AC091059.2-201ENST00000623355 614 ntBASIC8.08□□□□□ -1.12
LIG1P18858 LINC01427-203ENST00000635277 781 ntTSL 5 BASIC8.08□□□□□ -1.12
LIG1P18858 AC132825.8-201ENST00000640783 297 ntBASIC8.08□□□□□ -1.12
LIG1P18858 CLCA3P-203ENST00000490028 2781 ntBASIC8.08□□□□□ -1.12
LIG1P18858 TEX14-203ENST00000389934 4927 ntAPPRIS P4 TSL 1 (best) BASIC8.08□□□□□ -1.12
LIG1P18858 FRMD5-211ENST00000618556 5059 ntTSL 5 BASIC8.08□□□□□ -1.12
LIG1P18858 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC8.08□□□□□ -1.12
LIG1P18858 ZNF326-203ENST00000370447 9433 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
LIG1P18858 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
LIG1P18858 ATF7IP2-203ENST00000396559 3641 ntTSL 2 BASIC8.08□□□□□ -1.12
LIG1P18858 ZNF711-202ENST00000360700 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
LIG1P18858 OR2A3P-202ENST00000641249 1776 ntBASIC8.07□□□□□ -1.12
LIG1P18858 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC8.07□□□□□ -1.12
LIG1P18858 AC121761.1-201ENST00000547326 1482 ntTSL 3 BASIC8.07□□□□□ -1.12
LIG1P18858 STN1-202ENST00000369764 1311 ntAPPRIS P1 TSL 2 BASIC8.07□□□□□ -1.12
LIG1P18858 SOX6-201ENST00000316399 8808 ntAPPRIS P3 TSL 5 BASIC8.07□□□□□ -1.12
LIG1P18858 TEAD1-201ENST00000334310 3075 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
LIG1P18858 TEAD1-205ENST00000527575 3063 ntTSL 5 BASIC8.07□□□□□ -1.12
LIG1P18858 PCBP1-AS1-210ENST00000416395 2451 ntTSL 2 BASIC8.07□□□□□ -1.12
LIG1P18858 KLHL2-202ENST00000421009 2452 ntTSL 5 BASIC8.07□□□□□ -1.12
LIG1P18858 IAPP-205ENST00000542023 2015 ntTSL 2 BASIC8.07□□□□□ -1.12
LIG1P18858 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC8.07□□□□□ -1.12
LIG1P18858 ATP10D-203ENST00000504445 2550 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
LIG1P18858 DCP1A-206ENST00000610213 5994 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
LIG1P18858 IGF2R-201ENST00000356956 14044 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
LIG1P18858 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC8.07□□□□□ -1.12
LIG1P18858 SNORA70.8-201ENST00000384231 136 ntBASIC8.07□□□□□ -1.12
LIG1P18858 S100B-203ENST00000397648 839 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
LIG1P18858 RNA5SP231-201ENST00000410496 138 ntBASIC8.07□□□□□ -1.12
LIG1P18858 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC8.07□□□□□ -1.12
LIG1P18858 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC8.07□□□□□ -1.12
LIG1P18858 LINC01687-203ENST00000420255 897 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
LIG1P18858 GSTA7P-201ENST00000438425 448 ntBASIC8.07□□□□□ -1.12
LIG1P18858 AL359265.1-201ENST00000440296 795 ntBASIC8.07□□□□□ -1.12
LIG1P18858 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC8.07□□□□□ -1.12
LIG1P18858 PMS2P9-201ENST00000441237 515 ntBASIC8.07□□□□□ -1.12
LIG1P18858 MIR4422HG-201ENST00000451250 638 ntTSL 3 BASIC8.07□□□□□ -1.12
LIG1P18858 USP9YP10-201ENST00000454868 628 ntBASIC8.07□□□□□ -1.12
LIG1P18858 AF015262.1-201ENST00000455028 698 ntTSL 3 BASIC8.07□□□□□ -1.12
LIG1P18858 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC8.07□□□□□ -1.12
LIG1P18858 SNORA35.1-201ENST00000458908 128 ntBASIC8.07□□□□□ -1.12
LIG1P18858 BET1P1-201ENST00000482276 359 ntBASIC8.07□□□□□ -1.12
LIG1P18858 EIF1P7-201ENST00000487533 337 ntBASIC8.07□□□□□ -1.12
LIG1P18858 AC096741.2-201ENST00000510225 637 ntTSL 5 BASIC8.07□□□□□ -1.12
LIG1P18858 USP9YP5-201ENST00000511770 630 ntBASIC8.07□□□□□ -1.12
LIG1P18858 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC8.07□□□□□ -1.12
LIG1P18858 AC008494.2-201ENST00000514544 370 ntBASIC8.07□□□□□ -1.12
LIG1P18858 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC8.07□□□□□ -1.12
LIG1P18858 IGLV1-62-201ENST00000518003 441 ntBASIC8.07□□□□□ -1.12
LIG1P18858 SUMO2P19-201ENST00000518920 295 ntBASIC8.07□□□□□ -1.12
LIG1P18858 AC010476.1-201ENST00000519111 851 ntBASIC8.07□□□□□ -1.12
LIG1P18858 IGHVII-49-1-201ENST00000521760 224 ntBASIC8.07□□□□□ -1.12
LIG1P18858 C5orf58-205ENST00000524171 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC8.07□□□□□ -1.12
LIG1P18858 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
LIG1P18858 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC8.07□□□□□ -1.12
LIG1P18858 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC8.07□□□□□ -1.12
LIG1P18858 AC016144.1-201ENST00000548175 1087 ntBASIC8.07□□□□□ -1.12
LIG1P18858 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC8.07□□□□□ -1.12
LIG1P18858 C1GALT1P1-201ENST00000548895 1089 ntBASIC8.07□□□□□ -1.12
LIG1P18858 AL049870.3-201ENST00000555157 360 ntTSL 2 BASIC8.07□□□□□ -1.12
LIG1P18858 AC023827.2-201ENST00000566880 1061 ntBASIC8.07□□□□□ -1.12
LIG1P18858 AC009063.2-203ENST00000567860 745 ntTSL 2 BASIC8.07□□□□□ -1.12
LIG1P18858 AC026992.2-201ENST00000570122 766 ntTSL 5 BASIC8.07□□□□□ -1.12
LIG1P18858 AC090774.2-201ENST00000584708 322 ntBASIC8.07□□□□□ -1.12
LIG1P18858 FAM60CP-201ENST00000591086 664 ntBASIC8.07□□□□□ -1.12
LIG1P18858 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC8.07□□□□□ -1.12
LIG1P18858 AL353807.4-201ENST00000604995 257 ntBASIC8.07□□□□□ -1.12
LIG1P18858 AMYH02020865.1-207ENST00000617096 458 ntTSL 3 BASIC8.07□□□□□ -1.12
LIG1P18858 AL121985.3-201ENST00000620690 523 ntBASIC8.07□□□□□ -1.12
LIG1P18858 AC093875.1-201ENST00000623688 504 ntBASIC8.07□□□□□ -1.12
LIG1P18858 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC8.07□□□□□ -1.12
LIG1P18858 FRG1EP-201ENST00000634469 770 ntBASIC8.07□□□□□ -1.12
LIG1P18858 ELOVL5-201ENST00000304434 2827 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
LIG1P18858 RASGRP3-203ENST00000407811 4210 ntAPPRIS ALT1 TSL 1 (best) BASIC8.07□□□□□ -1.12
LIG1P18858 PPHLN1-207ENST00000432191 3377 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
LIG1P18858 GCNA-201ENST00000373695 3213 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
LIG1P18858 PCDH15-213ENST00000395445 5917 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
LIG1P18858 KCNJ15-220ENST00000612702 3046 ntAPPRIS P1 TSL 4 BASIC8.07□□□□□ -1.12
LIG1P18858 BLOC1S2-206ENST00000618916 2470 ntTSL 5 BASIC8.07□□□□□ -1.12
LIG1P18858 SORCS1-210ENST00000622431 6701 ntTSL 5 BASIC8.07□□□□□ -1.12
LIG1P18858 MPP7-201ENST00000337532 5080 ntAPPRIS P1 TSL 5 BASIC8.07□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 66.7 ms