Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 AL391863.1-202ENST00000457427 612 ntTSL 5 BASIC5.3□□□□□ -1.56
UPK1BO75841 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC5.3□□□□□ -1.56
UPK1BO75841 RPL7P17-201ENST00000470927 724 ntBASIC5.3□□□□□ -1.56
UPK1BO75841 RN7SL37P-201ENST00000490461 307 ntBASIC5.3□□□□□ -1.56
UPK1BO75841 RAB7A-208ENST00000493186 329 ntTSL 5 BASIC5.3□□□□□ -1.56
UPK1BO75841 RPL19P11-201ENST00000495944 589 ntBASIC5.3□□□□□ -1.56
UPK1BO75841 AC140125.3-202ENST00000504362 348 ntTSL 3 BASIC5.3□□□□□ -1.56
UPK1BO75841 AC110800.1-201ENST00000505498 441 ntTSL 2 BASIC5.3□□□□□ -1.56
UPK1BO75841 LINC01184-206ENST00000508878 968 ntTSL 5 BASIC5.3□□□□□ -1.56
UPK1BO75841 AC138965.1-201ENST00000509329 348 ntTSL 3 BASIC5.3□□□□□ -1.56
UPK1BO75841 AC010343.2-201ENST00000510162 224 ntBASIC5.3□□□□□ -1.56
UPK1BO75841 LINC01603-202ENST00000519557 712 ntTSL 3 BASIC5.3□□□□□ -1.56
UPK1BO75841 AC022973.4-201ENST00000524100 917 ntTSL 2 BASIC5.3□□□□□ -1.56
UPK1BO75841 SLC14A1-206ENST00000535474 1048 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
UPK1BO75841 AC024901.1-201ENST00000535764 718 ntTSL 3 BASIC5.3□□□□□ -1.56
UPK1BO75841 AC243972.1-201ENST00000542992 570 ntTSL 4 BASIC5.3□□□□□ -1.56
UPK1BO75841 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC5.3□□□□□ -1.56
UPK1BO75841 CD63-206ENST00000548160 648 ntTSL 2 BASIC5.3□□□□□ -1.56
UPK1BO75841 PCED1B-AS1-207ENST00000551432 522 ntTSL 5 BASIC5.3□□□□□ -1.56
UPK1BO75841 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
UPK1BO75841 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC5.3□□□□□ -1.56
UPK1BO75841 AL163952.1-202ENST00000569625 600 ntBASIC5.3□□□□□ -1.56
UPK1BO75841 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC5.3□□□□□ -1.56
UPK1BO75841 MIR3689F-201ENST00000579617 66 ntBASIC5.3□□□□□ -1.56
UPK1BO75841 AC005746.2-201ENST00000585765 470 ntTSL 5 BASIC5.3□□□□□ -1.56
UPK1BO75841 AL050343.1-203ENST00000586761 1290 ntTSL 3 BASIC5.3□□□□□ -1.56
UPK1BO75841 AL354733.2-205ENST00000590813 621 ntTSL 5 BASIC5.3□□□□□ -1.56
UPK1BO75841 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC5.3□□□□□ -1.56
UPK1BO75841 AL136304.1-201ENST00000607790 509 ntBASIC5.3□□□□□ -1.56
UPK1BO75841 IGKV2OR2-10-201ENST00000613976 311 ntBASIC5.3□□□□□ -1.56
UPK1BO75841 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC5.3□□□□□ -1.56
UPK1BO75841 AL355974.3-201ENST00000617383 467 ntBASIC5.3□□□□□ -1.56
UPK1BO75841 MIR7159-201ENST00000620587 66 ntBASIC5.3□□□□□ -1.56
UPK1BO75841 SNX18P12-201ENST00000624821 759 ntBASIC5.3□□□□□ -1.56
UPK1BO75841 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
UPK1BO75841 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
UPK1BO75841 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
UPK1BO75841 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
UPK1BO75841 ANTXR2-204ENST00000404191 1469 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
UPK1BO75841 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
UPK1BO75841 ZFP90-201ENST00000398253 4384 ntAPPRIS P1 TSL 4 BASIC5.3□□□□□ -1.56
UPK1BO75841 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
UPK1BO75841 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.3□□□□□ -1.56
UPK1BO75841 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC5.3□□□□□ -1.56
UPK1BO75841 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC5.3□□□□□ -1.56
UPK1BO75841 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
UPK1BO75841 TTC33-207ENST00000637375 1824 ntTSL 5 BASIC5.3□□□□□ -1.56
UPK1BO75841 KYNU-203ENST00000409512 1576 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
UPK1BO75841 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.29□□□□□ -1.56
UPK1BO75841 AC105383.1-202ENST00000505289 2820 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
UPK1BO75841 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
UPK1BO75841 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.29□□□□□ -1.56
UPK1BO75841 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC5.29□□□□□ -1.56
UPK1BO75841 WFDC8-201ENST00000289953 1069 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
UPK1BO75841 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
UPK1BO75841 RN7SKP76-201ENST00000364419 323 ntBASIC5.29□□□□□ -1.56
UPK1BO75841 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC5.29□□□□□ -1.56
UPK1BO75841 RPS3AP5-201ENST00000389400 821 ntBASIC5.29□□□□□ -1.56
UPK1BO75841 RAN-201ENST00000392367 780 ntTSL 5 BASIC5.29□□□□□ -1.56
UPK1BO75841 RN7SKP194-201ENST00000411328 351 ntBASIC5.29□□□□□ -1.56
UPK1BO75841 HYALP1-201ENST00000417674 1279 ntBASIC5.29□□□□□ -1.56
UPK1BO75841 TRBV30-201ENST00000417977 447 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
UPK1BO75841 KCND3-AS1-201ENST00000419258 383 ntTSL 3 BASIC5.29□□□□□ -1.56
UPK1BO75841 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC5.29□□□□□ -1.56
UPK1BO75841 AC009299.1-201ENST00000429684 717 ntBASIC5.29□□□□□ -1.56
UPK1BO75841 AC108479.1-201ENST00000431142 427 ntBASIC5.29□□□□□ -1.56
UPK1BO75841 AL513303.1-201ENST00000432452 591 ntTSL 2 BASIC5.29□□□□□ -1.56
UPK1BO75841 HMGN2P24-201ENST00000433516 273 ntBASIC5.29□□□□□ -1.56
UPK1BO75841 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC5.29□□□□□ -1.56
UPK1BO75841 AC074121.1-201ENST00000441836 348 ntBASIC5.29□□□□□ -1.56
UPK1BO75841 SNRPBP1-201ENST00000443634 282 ntBASIC5.29□□□□□ -1.56
UPK1BO75841 AL136982.6-201ENST00000444180 1238 ntTSL 2 BASIC5.29□□□□□ -1.56
UPK1BO75841 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC5.29□□□□□ -1.56
UPK1BO75841 SAP18P3-201ENST00000449663 396 ntBASIC5.29□□□□□ -1.56
UPK1BO75841 AC136489.1-203ENST00000450246 736 ntTSL 5 BASIC5.29□□□□□ -1.56
UPK1BO75841 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
UPK1BO75841 PFN2-213ENST00000494827 793 ntTSL 4 BASIC5.29□□□□□ -1.56
UPK1BO75841 AC023424.1-201ENST00000496058 459 ntBASIC5.29□□□□□ -1.56
UPK1BO75841 ROPN1B-207ENST00000511082 782 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
UPK1BO75841 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC5.29□□□□□ -1.56
UPK1BO75841 TMEM97P2-201ENST00000517841 403 ntBASIC5.29□□□□□ -1.56
UPK1BO75841 OR5M4P-201ENST00000529436 925 ntBASIC5.29□□□□□ -1.56
UPK1BO75841 ZNF503-AS1-205ENST00000530606 549 ntTSL 4 BASIC5.29□□□□□ -1.56
UPK1BO75841 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC5.29□□□□□ -1.56
UPK1BO75841 AP002383.5-201ENST00000542623 1161 ntBASIC5.29□□□□□ -1.56
UPK1BO75841 RNASE11-206ENST00000553849 1101 ntAPPRIS P2 TSL 1 (best) BASIC5.29□□□□□ -1.56
UPK1BO75841 AL096869.1-201ENST00000557622 559 ntTSL 4 BASIC5.29□□□□□ -1.56
UPK1BO75841 AC103740.1-204ENST00000557994 570 ntTSL 4 BASIC5.29□□□□□ -1.56
UPK1BO75841 LINC01582-201ENST00000560195 560 ntTSL 4 BASIC5.29□□□□□ -1.56
UPK1BO75841 SCML2P1-201ENST00000584511 1100 ntBASIC5.29□□□□□ -1.56
UPK1BO75841 TTN-AS1-218ENST00000586452 828 ntTSL 5 BASIC5.29□□□□□ -1.56
UPK1BO75841 AC009303.2-206ENST00000588042 786 ntTSL 5 BASIC5.29□□□□□ -1.56
UPK1BO75841 PCBP1-AS1-244ENST00000594376 1197 ntTSL 5 BASIC5.29□□□□□ -1.56
UPK1BO75841 ZRANB2-AS2-215ENST00000596952 624 ntTSL 5 BASIC5.29□□□□□ -1.56
UPK1BO75841 RN7SL760P-201ENST00000607344 270 ntBASIC5.29□□□□□ -1.56
UPK1BO75841 PART1_3.1-201ENST00000619680 131 ntBASIC5.29□□□□□ -1.56
UPK1BO75841 MIR6723-201ENST00000621981 89 ntBASIC5.29□□□□□ -1.56
UPK1BO75841 FLII-230ENST00000628188 156 ntTSL 5 BASIC5.29□□□□□ -1.56
UPK1BO75841 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC5.29□□□□□ -1.56
UPK1BO75841 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 110.8 ms