Protein–RNA interactions for Protein: W4VSP1

Speer3, MCG129800, mousemouse

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Speer3W4VSP1 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Speer3W4VSP1 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Speer3W4VSP1 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Speer3W4VSP1 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Speer3W4VSP1 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Speer3W4VSP1 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Speer3W4VSP1 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Speer3W4VSP1 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Speer3W4VSP1 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
Speer3W4VSP1 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
Speer3W4VSP1 Gm12441-201ENSMUST00000121806 588 ntBASIC17.36■□□□□ 0.37
Speer3W4VSP1 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Speer3W4VSP1 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC17.36■□□□□ 0.37
Speer3W4VSP1 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC17.36■□□□□ 0.37
Speer3W4VSP1 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Speer3W4VSP1 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Speer3W4VSP1 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Speer3W4VSP1 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC17.36■□□□□ 0.37
Speer3W4VSP1 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Speer3W4VSP1 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Speer3W4VSP1 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Speer3W4VSP1 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Speer3W4VSP1 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Speer3W4VSP1 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Speer3W4VSP1 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Speer3W4VSP1 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Speer3W4VSP1 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Speer3W4VSP1 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Speer3W4VSP1 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Speer3W4VSP1 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC17.35■□□□□ 0.37
Speer3W4VSP1 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Speer3W4VSP1 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC17.35■□□□□ 0.37
Speer3W4VSP1 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Speer3W4VSP1 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Speer3W4VSP1 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Speer3W4VSP1 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Speer3W4VSP1 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Speer3W4VSP1 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Speer3W4VSP1 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC17.35■□□□□ 0.37
Speer3W4VSP1 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Speer3W4VSP1 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC17.35■□□□□ 0.37
Speer3W4VSP1 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Speer3W4VSP1 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Speer3W4VSP1 Gm12896-201ENSMUST00000118430 226 ntBASIC17.34■□□□□ 0.37
Speer3W4VSP1 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC17.34■□□□□ 0.37
Speer3W4VSP1 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Speer3W4VSP1 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC17.34■□□□□ 0.37
Speer3W4VSP1 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Speer3W4VSP1 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Speer3W4VSP1 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Speer3W4VSP1 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Speer3W4VSP1 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Speer3W4VSP1 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Speer3W4VSP1 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Speer3W4VSP1 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Speer3W4VSP1 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Speer3W4VSP1 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Speer3W4VSP1 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Speer3W4VSP1 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Speer3W4VSP1 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC17.34■□□□□ 0.37
Speer3W4VSP1 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Speer3W4VSP1 Gm37166-201ENSMUST00000195473 2474 ntBASIC17.33■□□□□ 0.37
Speer3W4VSP1 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Speer3W4VSP1 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Speer3W4VSP1 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Speer3W4VSP1 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Speer3W4VSP1 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Speer3W4VSP1 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
Speer3W4VSP1 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC17.33■□□□□ 0.36
Speer3W4VSP1 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Speer3W4VSP1 Gm38285-201ENSMUST00000192928 922 ntBASIC17.33■□□□□ 0.36
Speer3W4VSP1 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Speer3W4VSP1 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC17.33■□□□□ 0.36
Speer3W4VSP1 Zfp783-201ENSMUST00000095946 670 ntBASIC17.33■□□□□ 0.36
Speer3W4VSP1 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Speer3W4VSP1 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Speer3W4VSP1 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Speer3W4VSP1 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Speer3W4VSP1 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Speer3W4VSP1 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC17.33■□□□□ 0.36
Speer3W4VSP1 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Speer3W4VSP1 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Speer3W4VSP1 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Speer3W4VSP1 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Speer3W4VSP1 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Speer3W4VSP1 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Speer3W4VSP1 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Speer3W4VSP1 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Speer3W4VSP1 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Speer3W4VSP1 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Speer3W4VSP1 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Speer3W4VSP1 Zkscan3-208ENSMUST00000224820 5398 ntBASIC17.32■□□□□ 0.36
Speer3W4VSP1 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Speer3W4VSP1 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Speer3W4VSP1 Gm20628-201ENSMUST00000177363 3215 ntBASIC17.32■□□□□ 0.36
Speer3W4VSP1 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Speer3W4VSP1 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC17.32■□□□□ 0.36
Speer3W4VSP1 Crls1-204ENSMUST00000124836 1267 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Speer3W4VSP1 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC17.32■□□□□ 0.36
Speer3W4VSP1 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 61.4 ms