Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nkx2-4Q9EQM3 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Nkx2-4Q9EQM3 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Nkx2-4Q9EQM3 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nkx2-4Q9EQM3 Gm32996-201ENSMUST00000199828 1447 ntBASIC17.48■□□□□ 0.39
Nkx2-4Q9EQM3 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nkx2-4Q9EQM3 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC17.48■□□□□ 0.39
Nkx2-4Q9EQM3 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC17.48■□□□□ 0.39
Nkx2-4Q9EQM3 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nkx2-4Q9EQM3 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC17.48■□□□□ 0.39
Nkx2-4Q9EQM3 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Nkx2-4Q9EQM3 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nkx2-4Q9EQM3 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
Nkx2-4Q9EQM3 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Nkx2-4Q9EQM3 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nkx2-4Q9EQM3 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nkx2-4Q9EQM3 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC17.48■□□□□ 0.39
Nkx2-4Q9EQM3 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Nkx2-4Q9EQM3 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nkx2-4Q9EQM3 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nkx2-4Q9EQM3 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nkx2-4Q9EQM3 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nkx2-4Q9EQM3 Gm38342-201ENSMUST00000195710 2980 ntBASIC17.47■□□□□ 0.39
Nkx2-4Q9EQM3 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Nkx2-4Q9EQM3 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nkx2-4Q9EQM3 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nkx2-4Q9EQM3 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nkx2-4Q9EQM3 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nkx2-4Q9EQM3 Gm15165-201ENSMUST00000118140 502 ntBASIC17.47■□□□□ 0.39
Nkx2-4Q9EQM3 Gm13312-201ENSMUST00000119631 718 ntBASIC17.47■□□□□ 0.39
Nkx2-4Q9EQM3 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC17.47■□□□□ 0.39
Nkx2-4Q9EQM3 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC17.47■□□□□ 0.39
Nkx2-4Q9EQM3 Gm13830-205ENSMUST00000201195 1155 ntBASIC17.47■□□□□ 0.39
Nkx2-4Q9EQM3 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
Nkx2-4Q9EQM3 CT943659.1-201ENSMUST00000215459 326 ntBASIC17.47■□□□□ 0.39
Nkx2-4Q9EQM3 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nkx2-4Q9EQM3 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nkx2-4Q9EQM3 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Nkx2-4Q9EQM3 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Nkx2-4Q9EQM3 Gm43272-201ENSMUST00000200599 1584 ntBASIC17.47■□□□□ 0.39
Nkx2-4Q9EQM3 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nkx2-4Q9EQM3 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nkx2-4Q9EQM3 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC17.47■□□□□ 0.39
Nkx2-4Q9EQM3 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nkx2-4Q9EQM3 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nkx2-4Q9EQM3 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nkx2-4Q9EQM3 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Nkx2-4Q9EQM3 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC17.46■□□□□ 0.39
Nkx2-4Q9EQM3 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Nkx2-4Q9EQM3 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nkx2-4Q9EQM3 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC17.46■□□□□ 0.39
Nkx2-4Q9EQM3 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nkx2-4Q9EQM3 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nkx2-4Q9EQM3 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nkx2-4Q9EQM3 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nkx2-4Q9EQM3 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nkx2-4Q9EQM3 Gm15467-201ENSMUST00000120582 445 ntBASIC17.46■□□□□ 0.39
Nkx2-4Q9EQM3 Mir8112-201ENSMUST00000184382 131 ntBASIC17.46■□□□□ 0.39
Nkx2-4Q9EQM3 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC17.46■□□□□ 0.39
Nkx2-4Q9EQM3 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC17.46■□□□□ 0.39
Nkx2-4Q9EQM3 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
Nkx2-4Q9EQM3 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC17.46■□□□□ 0.39
Nkx2-4Q9EQM3 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nkx2-4Q9EQM3 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nkx2-4Q9EQM3 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC17.46■□□□□ 0.39
Nkx2-4Q9EQM3 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nkx2-4Q9EQM3 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nkx2-4Q9EQM3 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Nkx2-4Q9EQM3 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nkx2-4Q9EQM3 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nkx2-4Q9EQM3 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Nkx2-4Q9EQM3 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.38
Nkx2-4Q9EQM3 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nkx2-4Q9EQM3 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nkx2-4Q9EQM3 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Nkx2-4Q9EQM3 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC17.45■□□□□ 0.38
Nkx2-4Q9EQM3 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC17.45■□□□□ 0.38
Nkx2-4Q9EQM3 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Nkx2-4Q9EQM3 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Nkx2-4Q9EQM3 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nkx2-4Q9EQM3 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nkx2-4Q9EQM3 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nkx2-4Q9EQM3 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Nkx2-4Q9EQM3 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Nkx2-4Q9EQM3 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nkx2-4Q9EQM3 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Nkx2-4Q9EQM3 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nkx2-4Q9EQM3 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nkx2-4Q9EQM3 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nkx2-4Q9EQM3 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC17.44■□□□□ 0.38
Nkx2-4Q9EQM3 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Nkx2-4Q9EQM3 Mir5126-201ENSMUST00000175513 77 ntBASIC17.44■□□□□ 0.38
Nkx2-4Q9EQM3 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
Nkx2-4Q9EQM3 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nkx2-4Q9EQM3 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC17.44■□□□□ 0.38
Nkx2-4Q9EQM3 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nkx2-4Q9EQM3 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nkx2-4Q9EQM3 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Nkx2-4Q9EQM3 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nkx2-4Q9EQM3 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 56.8 ms