Protein–RNA interactions for Protein: Q99NH8

Trem2, Triggering receptor expressed on myeloid cells 2, mousemouse

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem2Q99NH8 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
Trem2Q99NH8 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trem2Q99NH8 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC17.35■□□□□ 0.37
Trem2Q99NH8 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Trem2Q99NH8 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trem2Q99NH8 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trem2Q99NH8 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trem2Q99NH8 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Trem2Q99NH8 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trem2Q99NH8 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trem2Q99NH8 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC17.34■□□□□ 0.37
Trem2Q99NH8 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trem2Q99NH8 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Trem2Q99NH8 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trem2Q99NH8 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC17.34■□□□□ 0.37
Trem2Q99NH8 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC17.34■□□□□ 0.37
Trem2Q99NH8 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trem2Q99NH8 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC17.34■□□□□ 0.37
Trem2Q99NH8 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Trem2Q99NH8 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trem2Q99NH8 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trem2Q99NH8 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC17.34■□□□□ 0.37
Trem2Q99NH8 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trem2Q99NH8 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trem2Q99NH8 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trem2Q99NH8 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trem2Q99NH8 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trem2Q99NH8 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trem2Q99NH8 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trem2Q99NH8 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trem2Q99NH8 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
Trem2Q99NH8 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Trem2Q99NH8 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trem2Q99NH8 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Trem2Q99NH8 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trem2Q99NH8 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trem2Q99NH8 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trem2Q99NH8 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trem2Q99NH8 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trem2Q99NH8 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trem2Q99NH8 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Trem2Q99NH8 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trem2Q99NH8 Gm7791-201ENSMUST00000219066 539 ntBASIC17.33■□□□□ 0.36
Trem2Q99NH8 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trem2Q99NH8 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC17.33■□□□□ 0.36
Trem2Q99NH8 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC17.33■□□□□ 0.36
Trem2Q99NH8 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
Trem2Q99NH8 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trem2Q99NH8 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Trem2Q99NH8 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trem2Q99NH8 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC17.32■□□□□ 0.36
Trem2Q99NH8 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trem2Q99NH8 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
Trem2Q99NH8 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trem2Q99NH8 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC17.32■□□□□ 0.36
Trem2Q99NH8 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC17.32■□□□□ 0.36
Trem2Q99NH8 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trem2Q99NH8 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trem2Q99NH8 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trem2Q99NH8 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trem2Q99NH8 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trem2Q99NH8 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Trem2Q99NH8 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trem2Q99NH8 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Trem2Q99NH8 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trem2Q99NH8 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Trem2Q99NH8 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Trem2Q99NH8 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC17.31■□□□□ 0.36
Trem2Q99NH8 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trem2Q99NH8 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Trem2Q99NH8 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC17.31■□□□□ 0.36
Trem2Q99NH8 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trem2Q99NH8 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trem2Q99NH8 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Trem2Q99NH8 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC17.31■□□□□ 0.36
Trem2Q99NH8 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Trem2Q99NH8 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Trem2Q99NH8 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Trem2Q99NH8 Otx2os1-204ENSMUST00000227221 751 ntBASIC17.31■□□□□ 0.36
Trem2Q99NH8 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Trem2Q99NH8 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Trem2Q99NH8 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trem2Q99NH8 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trem2Q99NH8 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC17.3■□□□□ 0.36
Trem2Q99NH8 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trem2Q99NH8 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Trem2Q99NH8 Gm22240-201ENSMUST00000175225 82 ntBASIC17.3■□□□□ 0.36
Trem2Q99NH8 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Trem2Q99NH8 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trem2Q99NH8 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Trem2Q99NH8 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trem2Q99NH8 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Trem2Q99NH8 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Trem2Q99NH8 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trem2Q99NH8 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trem2Q99NH8 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Trem2Q99NH8 Gm36858-201ENSMUST00000194501 2391 ntBASIC17.3■□□□□ 0.36
Trem2Q99NH8 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Trem2Q99NH8 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trem2Q99NH8 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms