Protein–RNA interactions for Protein: Q99JR8

Smarcd2, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2, mousemouse

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd2Q99JR8 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC17.23■□□□□ 0.35
Smarcd2Q99JR8 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC17.23■□□□□ 0.35
Smarcd2Q99JR8 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC17.22■□□□□ 0.35
Smarcd2Q99JR8 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Smarcd2Q99JR8 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Smarcd2Q99JR8 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Smarcd2Q99JR8 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC17.22■□□□□ 0.35
Smarcd2Q99JR8 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Smarcd2Q99JR8 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Smarcd2Q99JR8 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Smarcd2Q99JR8 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Smarcd2Q99JR8 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Smarcd2Q99JR8 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC17.22■□□□□ 0.35
Smarcd2Q99JR8 Gm27459-201ENSMUST00000184860 107 ntBASIC17.22■□□□□ 0.35
Smarcd2Q99JR8 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC17.22■□□□□ 0.35
Smarcd2Q99JR8 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Smarcd2Q99JR8 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Smarcd2Q99JR8 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Smarcd2Q99JR8 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Smarcd2Q99JR8 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Smarcd2Q99JR8 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Smarcd2Q99JR8 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Smarcd2Q99JR8 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC17.21■□□□□ 0.35
Smarcd2Q99JR8 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Smarcd2Q99JR8 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Smarcd2Q99JR8 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Smarcd2Q99JR8 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Smarcd2Q99JR8 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC17.21■□□□□ 0.35
Smarcd2Q99JR8 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Smarcd2Q99JR8 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Smarcd2Q99JR8 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Smarcd2Q99JR8 AC153889.1-201ENSMUST00000219257 330 ntBASIC17.21■□□□□ 0.35
Smarcd2Q99JR8 AC125350.1-201ENSMUST00000225115 903 ntBASIC17.21■□□□□ 0.35
Smarcd2Q99JR8 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Smarcd2Q99JR8 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Smarcd2Q99JR8 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Smarcd2Q99JR8 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Smarcd2Q99JR8 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Smarcd2Q99JR8 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Smarcd2Q99JR8 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC17.2■□□□□ 0.34
Smarcd2Q99JR8 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Smarcd2Q99JR8 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Smarcd2Q99JR8 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Smarcd2Q99JR8 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
Smarcd2Q99JR8 Gm6190-201ENSMUST00000220683 1374 ntBASIC17.2■□□□□ 0.34
Smarcd2Q99JR8 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Smarcd2Q99JR8 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Smarcd2Q99JR8 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Smarcd2Q99JR8 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Smarcd2Q99JR8 Gm43347-201ENSMUST00000200226 580 ntBASIC17.2■□□□□ 0.34
Smarcd2Q99JR8 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Smarcd2Q99JR8 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Smarcd2Q99JR8 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Smarcd2Q99JR8 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Smarcd2Q99JR8 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC17.2■□□□□ 0.34
Smarcd2Q99JR8 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Smarcd2Q99JR8 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Smarcd2Q99JR8 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Smarcd2Q99JR8 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Smarcd2Q99JR8 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Smarcd2Q99JR8 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Smarcd2Q99JR8 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Smarcd2Q99JR8 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Smarcd2Q99JR8 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Smarcd2Q99JR8 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Smarcd2Q99JR8 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Smarcd2Q99JR8 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Smarcd2Q99JR8 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Smarcd2Q99JR8 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Smarcd2Q99JR8 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
Smarcd2Q99JR8 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC17.19■□□□□ 0.34
Smarcd2Q99JR8 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Smarcd2Q99JR8 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC17.19■□□□□ 0.34
Smarcd2Q99JR8 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Smarcd2Q99JR8 Gm5864-201ENSMUST00000202263 970 ntBASIC17.19■□□□□ 0.34
Smarcd2Q99JR8 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC17.19■□□□□ 0.34
Smarcd2Q99JR8 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Smarcd2Q99JR8 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Smarcd2Q99JR8 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC17.19■□□□□ 0.34
Smarcd2Q99JR8 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Smarcd2Q99JR8 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Smarcd2Q99JR8 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Smarcd2Q99JR8 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC17.19■□□□□ 0.34
Smarcd2Q99JR8 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Smarcd2Q99JR8 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Smarcd2Q99JR8 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Smarcd2Q99JR8 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Smarcd2Q99JR8 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Smarcd2Q99JR8 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC17.18■□□□□ 0.34
Smarcd2Q99JR8 Mir8098-201ENSMUST00000184011 137 ntBASIC17.18■□□□□ 0.34
Smarcd2Q99JR8 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Smarcd2Q99JR8 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Smarcd2Q99JR8 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Smarcd2Q99JR8 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Smarcd2Q99JR8 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Smarcd2Q99JR8 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Smarcd2Q99JR8 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Smarcd2Q99JR8 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Smarcd2Q99JR8 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Smarcd2Q99JR8 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms