Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhb3Q91XZ7 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhb3Q91XZ7 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhb3Q91XZ7 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhb3Q91XZ7 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhb3Q91XZ7 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Pcdhb3Q91XZ7 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhb3Q91XZ7 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhb3Q91XZ7 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhb3Q91XZ7 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhb3Q91XZ7 AC133083.1-201ENSMUST00000221736 2209 ntBASIC17.05■□□□□ 0.32
Pcdhb3Q91XZ7 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhb3Q91XZ7 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhb3Q91XZ7 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhb3Q91XZ7 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhb3Q91XZ7 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Pcdhb3Q91XZ7 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhb3Q91XZ7 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhb3Q91XZ7 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhb3Q91XZ7 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhb3Q91XZ7 Gm10653-202ENSMUST00000139570 835 ntBASIC17.05■□□□□ 0.32
Pcdhb3Q91XZ7 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhb3Q91XZ7 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC17.05■□□□□ 0.32
Pcdhb3Q91XZ7 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC17.05■□□□□ 0.32
Pcdhb3Q91XZ7 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhb3Q91XZ7 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC17.05■□□□□ 0.32
Pcdhb3Q91XZ7 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Pcdhb3Q91XZ7 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhb3Q91XZ7 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhb3Q91XZ7 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Pcdhb3Q91XZ7 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhb3Q91XZ7 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhb3Q91XZ7 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhb3Q91XZ7 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhb3Q91XZ7 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhb3Q91XZ7 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Pcdhb3Q91XZ7 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhb3Q91XZ7 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhb3Q91XZ7 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhb3Q91XZ7 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
Pcdhb3Q91XZ7 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhb3Q91XZ7 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhb3Q91XZ7 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
Pcdhb3Q91XZ7 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhb3Q91XZ7 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Pcdhb3Q91XZ7 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhb3Q91XZ7 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhb3Q91XZ7 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhb3Q91XZ7 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
Pcdhb3Q91XZ7 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhb3Q91XZ7 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhb3Q91XZ7 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhb3Q91XZ7 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhb3Q91XZ7 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhb3Q91XZ7 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhb3Q91XZ7 Gm12527-201ENSMUST00000117967 564 ntBASIC17.03■□□□□ 0.32
Pcdhb3Q91XZ7 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhb3Q91XZ7 Gm20760-201ENSMUST00000179197 648 ntBASIC17.03■□□□□ 0.32
Pcdhb3Q91XZ7 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhb3Q91XZ7 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC17.03■□□□□ 0.32
Pcdhb3Q91XZ7 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhb3Q91XZ7 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhb3Q91XZ7 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhb3Q91XZ7 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhb3Q91XZ7 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhb3Q91XZ7 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhb3Q91XZ7 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhb3Q91XZ7 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Pcdhb3Q91XZ7 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC17.03■□□□□ 0.32
Pcdhb3Q91XZ7 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdhb3Q91XZ7 Gm9954-202ENSMUST00000198686 4725 ntBASIC17.02■□□□□ 0.32
Pcdhb3Q91XZ7 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdhb3Q91XZ7 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC17.02■□□□□ 0.32
Pcdhb3Q91XZ7 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdhb3Q91XZ7 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdhb3Q91XZ7 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdhb3Q91XZ7 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdhb3Q91XZ7 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdhb3Q91XZ7 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdhb3Q91XZ7 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC17.02■□□□□ 0.32
Pcdhb3Q91XZ7 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC17.02■□□□□ 0.32
Pcdhb3Q91XZ7 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC17.02■□□□□ 0.32
Pcdhb3Q91XZ7 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC17.02■□□□□ 0.32
Pcdhb3Q91XZ7 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdhb3Q91XZ7 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Pcdhb3Q91XZ7 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Pcdhb3Q91XZ7 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Pcdhb3Q91XZ7 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
Pcdhb3Q91XZ7 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Pcdhb3Q91XZ7 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC17.01■□□□□ 0.31
Pcdhb3Q91XZ7 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhb3Q91XZ7 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhb3Q91XZ7 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhb3Q91XZ7 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC17.01■□□□□ 0.31
Pcdhb3Q91XZ7 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhb3Q91XZ7 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhb3Q91XZ7 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhb3Q91XZ7 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhb3Q91XZ7 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhb3Q91XZ7 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms