Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC16.79■□□□□ 0.28
Pcdhga4Q91XY4 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
Pcdhga4Q91XY4 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhga4Q91XY4 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Pcdhga4Q91XY4 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Pcdhga4Q91XY4 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Pcdhga4Q91XY4 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhga4Q91XY4 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC16.79■□□□□ 0.28
Pcdhga4Q91XY4 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhga4Q91XY4 Gm30025-201ENSMUST00000218555 728 ntBASIC16.79■□□□□ 0.28
Pcdhga4Q91XY4 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Pcdhga4Q91XY4 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhga4Q91XY4 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhga4Q91XY4 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhga4Q91XY4 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC16.79■□□□□ 0.28
Pcdhga4Q91XY4 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhga4Q91XY4 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhga4Q91XY4 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhga4Q91XY4 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhga4Q91XY4 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhga4Q91XY4 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhga4Q91XY4 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhga4Q91XY4 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhga4Q91XY4 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhga4Q91XY4 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Pcdhga4Q91XY4 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhga4Q91XY4 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhga4Q91XY4 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC16.78■□□□□ 0.28
Pcdhga4Q91XY4 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhga4Q91XY4 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC16.78■□□□□ 0.28
Pcdhga4Q91XY4 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Pcdhga4Q91XY4 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Pcdhga4Q91XY4 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhga4Q91XY4 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhga4Q91XY4 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhga4Q91XY4 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Pcdhga4Q91XY4 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Pcdhga4Q91XY4 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
Pcdhga4Q91XY4 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC16.77■□□□□ 0.28
Pcdhga4Q91XY4 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdhga4Q91XY4 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdhga4Q91XY4 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdhga4Q91XY4 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Pcdhga4Q91XY4 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdhga4Q91XY4 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdhga4Q91XY4 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdhga4Q91XY4 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdhga4Q91XY4 Gm27463-201ENSMUST00000183569 57 ntBASIC16.77■□□□□ 0.28
Pcdhga4Q91XY4 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC16.77■□□□□ 0.28
Pcdhga4Q91XY4 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC16.77■□□□□ 0.28
Pcdhga4Q91XY4 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdhga4Q91XY4 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdhga4Q91XY4 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdhga4Q91XY4 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdhga4Q91XY4 Gm37374-201ENSMUST00000194954 1829 ntBASIC16.77■□□□□ 0.27
Pcdhga4Q91XY4 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Pcdhga4Q91XY4 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Pcdhga4Q91XY4 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Pcdhga4Q91XY4 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Pcdhga4Q91XY4 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Pcdhga4Q91XY4 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhga4Q91XY4 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhga4Q91XY4 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhga4Q91XY4 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhga4Q91XY4 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhga4Q91XY4 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhga4Q91XY4 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhga4Q91XY4 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhga4Q91XY4 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Pcdhga4Q91XY4 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhga4Q91XY4 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC16.76■□□□□ 0.27
Pcdhga4Q91XY4 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhga4Q91XY4 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhga4Q91XY4 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhga4Q91XY4 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhga4Q91XY4 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhga4Q91XY4 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhga4Q91XY4 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhga4Q91XY4 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhga4Q91XY4 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhga4Q91XY4 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhga4Q91XY4 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhga4Q91XY4 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhga4Q91XY4 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhga4Q91XY4 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhga4Q91XY4 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhga4Q91XY4 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhga4Q91XY4 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhga4Q91XY4 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhga4Q91XY4 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Pcdhga4Q91XY4 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC16.75■□□□□ 0.27
Pcdhga4Q91XY4 Gm15565-201ENSMUST00000118890 427 ntBASIC16.75■□□□□ 0.27
Pcdhga4Q91XY4 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC16.75■□□□□ 0.27
Pcdhga4Q91XY4 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhga4Q91XY4 Gm20472-201ENSMUST00000174403 1240 ntBASIC16.75■□□□□ 0.27
Pcdhga4Q91XY4 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhga4Q91XY4 Krtap5-1-202ENSMUST00000188274 742 ntBASIC16.75■□□□□ 0.27
Pcdhga4Q91XY4 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhga4Q91XY4 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhga4Q91XY4 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms