Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Ndc1Q8VCB1 Gm9731-201ENSMUST00000209480 747 ntBASIC16.1■□□□□ 0.17
Ndc1Q8VCB1 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC16.1■□□□□ 0.17
Ndc1Q8VCB1 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Ndc1Q8VCB1 Gm5898-201ENSMUST00000121016 2071 ntBASIC16.1■□□□□ 0.17
Ndc1Q8VCB1 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ndc1Q8VCB1 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Ndc1Q8VCB1 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ndc1Q8VCB1 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ndc1Q8VCB1 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Ndc1Q8VCB1 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC16.1■□□□□ 0.17
Ndc1Q8VCB1 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ndc1Q8VCB1 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ndc1Q8VCB1 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Ndc1Q8VCB1 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ndc1Q8VCB1 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ndc1Q8VCB1 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Ndc1Q8VCB1 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Ndc1Q8VCB1 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ndc1Q8VCB1 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ndc1Q8VCB1 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ndc1Q8VCB1 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ndc1Q8VCB1 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
Ndc1Q8VCB1 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Ndc1Q8VCB1 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ndc1Q8VCB1 Gm22697-201ENSMUST00000175194 63 ntBASIC16.09■□□□□ 0.17
Ndc1Q8VCB1 Gm18101-201ENSMUST00000215769 548 ntBASIC16.09■□□□□ 0.17
Ndc1Q8VCB1 AC134329.2-201ENSMUST00000217897 428 ntBASIC16.09■□□□□ 0.17
Ndc1Q8VCB1 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ndc1Q8VCB1 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ndc1Q8VCB1 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ndc1Q8VCB1 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ndc1Q8VCB1 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Ndc1Q8VCB1 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ndc1Q8VCB1 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Ndc1Q8VCB1 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ndc1Q8VCB1 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Ndc1Q8VCB1 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC16.09■□□□□ 0.17
Ndc1Q8VCB1 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ndc1Q8VCB1 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ndc1Q8VCB1 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC16.09■□□□□ 0.17
Ndc1Q8VCB1 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Ndc1Q8VCB1 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ndc1Q8VCB1 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ndc1Q8VCB1 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ndc1Q8VCB1 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC16.08■□□□□ 0.16
Ndc1Q8VCB1 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Ndc1Q8VCB1 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ndc1Q8VCB1 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ndc1Q8VCB1 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ndc1Q8VCB1 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ndc1Q8VCB1 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ndc1Q8VCB1 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ndc1Q8VCB1 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ndc1Q8VCB1 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Ndc1Q8VCB1 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ndc1Q8VCB1 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Ndc1Q8VCB1 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ndc1Q8VCB1 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ndc1Q8VCB1 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ndc1Q8VCB1 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ndc1Q8VCB1 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Ndc1Q8VCB1 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ndc1Q8VCB1 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ndc1Q8VCB1 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
Ndc1Q8VCB1 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ndc1Q8VCB1 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ndc1Q8VCB1 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ndc1Q8VCB1 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ndc1Q8VCB1 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ndc1Q8VCB1 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ndc1Q8VCB1 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ndc1Q8VCB1 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC16.07■□□□□ 0.16
Ndc1Q8VCB1 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Ndc1Q8VCB1 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC16.07■□□□□ 0.16
Ndc1Q8VCB1 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC16.07■□□□□ 0.16
Ndc1Q8VCB1 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ndc1Q8VCB1 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Ndc1Q8VCB1 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Ndc1Q8VCB1 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ndc1Q8VCB1 AC121598.2-201ENSMUST00000228376 2325 ntBASIC16.07■□□□□ 0.16
Ndc1Q8VCB1 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ndc1Q8VCB1 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ndc1Q8VCB1 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ndc1Q8VCB1 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Ndc1Q8VCB1 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Ndc1Q8VCB1 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ndc1Q8VCB1 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
Ndc1Q8VCB1 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ndc1Q8VCB1 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ndc1Q8VCB1 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC16.06■□□□□ 0.16
Ndc1Q8VCB1 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ndc1Q8VCB1 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ndc1Q8VCB1 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Ndc1Q8VCB1 Gm13474-201ENSMUST00000122466 815 ntBASIC16.06■□□□□ 0.16
Ndc1Q8VCB1 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ndc1Q8VCB1 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Ndc1Q8VCB1 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC16.06■□□□□ 0.16
Ndc1Q8VCB1 Gm6728-201ENSMUST00000178117 1065 ntBASIC16.06■□□□□ 0.16
Ndc1Q8VCB1 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms