Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Lsm1Q8VC85 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Lsm1Q8VC85 Gm15039-201ENSMUST00000118914 875 ntBASIC16.35■□□□□ 0.21
Lsm1Q8VC85 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Lsm1Q8VC85 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Lsm1Q8VC85 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Lsm1Q8VC85 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC16.35■□□□□ 0.21
Lsm1Q8VC85 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC16.35■□□□□ 0.21
Lsm1Q8VC85 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Lsm1Q8VC85 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Lsm1Q8VC85 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Lsm1Q8VC85 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Lsm1Q8VC85 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Lsm1Q8VC85 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Lsm1Q8VC85 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
Lsm1Q8VC85 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Lsm1Q8VC85 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Lsm1Q8VC85 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Lsm1Q8VC85 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
Lsm1Q8VC85 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC16.35■□□□□ 0.21
Lsm1Q8VC85 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Lsm1Q8VC85 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Lsm1Q8VC85 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Lsm1Q8VC85 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Lsm1Q8VC85 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Lsm1Q8VC85 Gm45412-201ENSMUST00000210217 2275 ntBASIC16.34■□□□□ 0.21
Lsm1Q8VC85 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Lsm1Q8VC85 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Lsm1Q8VC85 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Lsm1Q8VC85 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Lsm1Q8VC85 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Lsm1Q8VC85 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Lsm1Q8VC85 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Lsm1Q8VC85 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Lsm1Q8VC85 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Lsm1Q8VC85 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Lsm1Q8VC85 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Lsm1Q8VC85 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Lsm1Q8VC85 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Lsm1Q8VC85 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Lsm1Q8VC85 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Lsm1Q8VC85 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
Lsm1Q8VC85 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Lsm1Q8VC85 Gm36858-201ENSMUST00000194501 2391 ntBASIC16.33■□□□□ 0.2
Lsm1Q8VC85 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Lsm1Q8VC85 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC16.33■□□□□ 0.2
Lsm1Q8VC85 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Lsm1Q8VC85 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Lsm1Q8VC85 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lsm1Q8VC85 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lsm1Q8VC85 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lsm1Q8VC85 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Lsm1Q8VC85 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Lsm1Q8VC85 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lsm1Q8VC85 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lsm1Q8VC85 CT010444.2-201ENSMUST00000217877 1629 ntBASIC16.33■□□□□ 0.2
Lsm1Q8VC85 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lsm1Q8VC85 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Lsm1Q8VC85 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Lsm1Q8VC85 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lsm1Q8VC85 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Lsm1Q8VC85 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lsm1Q8VC85 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lsm1Q8VC85 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC16.32■□□□□ 0.2
Lsm1Q8VC85 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lsm1Q8VC85 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Lsm1Q8VC85 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lsm1Q8VC85 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lsm1Q8VC85 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Lsm1Q8VC85 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lsm1Q8VC85 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lsm1Q8VC85 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lsm1Q8VC85 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lsm1Q8VC85 Gm9694-201ENSMUST00000193347 1189 ntBASIC16.32■□□□□ 0.2
Lsm1Q8VC85 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Lsm1Q8VC85 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lsm1Q8VC85 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lsm1Q8VC85 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lsm1Q8VC85 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lsm1Q8VC85 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lsm1Q8VC85 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lsm1Q8VC85 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
Lsm1Q8VC85 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC16.32■□□□□ 0.2
Lsm1Q8VC85 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Lsm1Q8VC85 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lsm1Q8VC85 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Lsm1Q8VC85 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lsm1Q8VC85 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lsm1Q8VC85 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Lsm1Q8VC85 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lsm1Q8VC85 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lsm1Q8VC85 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lsm1Q8VC85 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lsm1Q8VC85 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lsm1Q8VC85 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lsm1Q8VC85 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lsm1Q8VC85 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Lsm1Q8VC85 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lsm1Q8VC85 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lsm1Q8VC85 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms