Protein–RNA interactions for Protein: Q8R4G9

Chrna3, Neuronal acetylcholine receptor subunit alpha-3, mousemouse

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna3Q8R4G9 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Chrna3Q8R4G9 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Chrna3Q8R4G9 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Chrna3Q8R4G9 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Chrna3Q8R4G9 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Chrna3Q8R4G9 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Chrna3Q8R4G9 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Chrna3Q8R4G9 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Chrna3Q8R4G9 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Chrna3Q8R4G9 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Chrna3Q8R4G9 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Chrna3Q8R4G9 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC16.76■□□□□ 0.27
Chrna3Q8R4G9 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Chrna3Q8R4G9 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Chrna3Q8R4G9 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
Chrna3Q8R4G9 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC16.76■□□□□ 0.27
Chrna3Q8R4G9 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Chrna3Q8R4G9 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC16.76■□□□□ 0.27
Chrna3Q8R4G9 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Chrna3Q8R4G9 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Chrna3Q8R4G9 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Chrna3Q8R4G9 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Chrna3Q8R4G9 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Chrna3Q8R4G9 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Chrna3Q8R4G9 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Chrna3Q8R4G9 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Chrna3Q8R4G9 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Chrna3Q8R4G9 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Chrna3Q8R4G9 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Chrna3Q8R4G9 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC16.75■□□□□ 0.27
Chrna3Q8R4G9 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
Chrna3Q8R4G9 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Chrna3Q8R4G9 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC16.75■□□□□ 0.27
Chrna3Q8R4G9 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Chrna3Q8R4G9 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Chrna3Q8R4G9 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Chrna3Q8R4G9 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Chrna3Q8R4G9 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC16.75■□□□□ 0.27
Chrna3Q8R4G9 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Chrna3Q8R4G9 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Chrna3Q8R4G9 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Chrna3Q8R4G9 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Chrna3Q8R4G9 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Chrna3Q8R4G9 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Chrna3Q8R4G9 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Chrna3Q8R4G9 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Chrna3Q8R4G9 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC16.75■□□□□ 0.27
Chrna3Q8R4G9 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Chrna3Q8R4G9 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC16.74■□□□□ 0.27
Chrna3Q8R4G9 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Chrna3Q8R4G9 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Chrna3Q8R4G9 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Chrna3Q8R4G9 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Chrna3Q8R4G9 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Chrna3Q8R4G9 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC16.74■□□□□ 0.27
Chrna3Q8R4G9 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Chrna3Q8R4G9 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Chrna3Q8R4G9 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC16.74■□□□□ 0.27
Chrna3Q8R4G9 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Chrna3Q8R4G9 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC16.74■□□□□ 0.27
Chrna3Q8R4G9 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Chrna3Q8R4G9 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Chrna3Q8R4G9 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Chrna3Q8R4G9 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Chrna3Q8R4G9 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Chrna3Q8R4G9 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Chrna3Q8R4G9 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC16.73■□□□□ 0.27
Chrna3Q8R4G9 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Chrna3Q8R4G9 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
Chrna3Q8R4G9 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC16.73■□□□□ 0.27
Chrna3Q8R4G9 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Chrna3Q8R4G9 Gm7370-201ENSMUST00000219471 767 ntBASIC16.73■□□□□ 0.27
Chrna3Q8R4G9 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Chrna3Q8R4G9 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Chrna3Q8R4G9 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Chrna3Q8R4G9 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Chrna3Q8R4G9 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Chrna3Q8R4G9 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Chrna3Q8R4G9 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Chrna3Q8R4G9 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Chrna3Q8R4G9 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Chrna3Q8R4G9 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Chrna3Q8R4G9 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Chrna3Q8R4G9 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Chrna3Q8R4G9 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Chrna3Q8R4G9 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Chrna3Q8R4G9 Fcho2-208ENSMUST00000224992 2964 ntBASIC16.72■□□□□ 0.27
Chrna3Q8R4G9 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Chrna3Q8R4G9 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC16.72■□□□□ 0.27
Chrna3Q8R4G9 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC16.72■□□□□ 0.27
Chrna3Q8R4G9 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
Chrna3Q8R4G9 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC16.72■□□□□ 0.27
Chrna3Q8R4G9 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC16.72■□□□□ 0.27
Chrna3Q8R4G9 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Chrna3Q8R4G9 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC16.72■□□□□ 0.27
Chrna3Q8R4G9 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Chrna3Q8R4G9 Zcchc6-207ENSMUST00000225576 2499 ntBASIC16.72■□□□□ 0.27
Chrna3Q8R4G9 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Chrna3Q8R4G9 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Chrna3Q8R4G9 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms