Protein–RNA interactions for Protein: Q8CE47

Slc49a3, Solute carrier family 49 member A3, mousemouse

Predictions only

Length 516 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc49a3Q8CE47 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Slc49a3Q8CE47 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC15.69■□□□□ 0.1
Slc49a3Q8CE47 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Slc49a3Q8CE47 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Slc49a3Q8CE47 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Slc49a3Q8CE47 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Slc49a3Q8CE47 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Slc49a3Q8CE47 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC15.69■□□□□ 0.1
Slc49a3Q8CE47 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Slc49a3Q8CE47 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Slc49a3Q8CE47 Gm18284-201ENSMUST00000172604 624 ntBASIC15.69■□□□□ 0.1
Slc49a3Q8CE47 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Slc49a3Q8CE47 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Slc49a3Q8CE47 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Slc49a3Q8CE47 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Slc49a3Q8CE47 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Slc49a3Q8CE47 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Slc49a3Q8CE47 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Slc49a3Q8CE47 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC15.68■□□□□ 0.1
Slc49a3Q8CE47 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Slc49a3Q8CE47 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Slc49a3Q8CE47 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Slc49a3Q8CE47 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
Slc49a3Q8CE47 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Slc49a3Q8CE47 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Slc49a3Q8CE47 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Slc49a3Q8CE47 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Slc49a3Q8CE47 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Slc49a3Q8CE47 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC15.68■□□□□ 0.1
Slc49a3Q8CE47 AC140264.2-202ENSMUST00000218746 817 ntBASIC15.68■□□□□ 0.1
Slc49a3Q8CE47 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
Slc49a3Q8CE47 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC15.68■□□□□ 0.1
Slc49a3Q8CE47 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Slc49a3Q8CE47 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Slc49a3Q8CE47 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Slc49a3Q8CE47 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC15.68■□□□□ 0.1
Slc49a3Q8CE47 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Slc49a3Q8CE47 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Slc49a3Q8CE47 Gm37812-201ENSMUST00000195216 2475 ntBASIC15.68■□□□□ 0.1
Slc49a3Q8CE47 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Slc49a3Q8CE47 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Slc49a3Q8CE47 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Slc49a3Q8CE47 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC15.67■□□□□ 0.1
Slc49a3Q8CE47 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Slc49a3Q8CE47 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Slc49a3Q8CE47 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC15.67■□□□□ 0.1
Slc49a3Q8CE47 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Slc49a3Q8CE47 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Slc49a3Q8CE47 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Slc49a3Q8CE47 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Slc49a3Q8CE47 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Slc49a3Q8CE47 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Slc49a3Q8CE47 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Slc49a3Q8CE47 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Slc49a3Q8CE47 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Slc49a3Q8CE47 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Slc49a3Q8CE47 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC15.67■□□□□ 0.1
Slc49a3Q8CE47 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Slc49a3Q8CE47 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Slc49a3Q8CE47 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Slc49a3Q8CE47 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Slc49a3Q8CE47 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Slc49a3Q8CE47 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Slc49a3Q8CE47 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Slc49a3Q8CE47 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Slc49a3Q8CE47 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Slc49a3Q8CE47 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Slc49a3Q8CE47 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Slc49a3Q8CE47 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Slc49a3Q8CE47 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Slc49a3Q8CE47 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Slc49a3Q8CE47 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Slc49a3Q8CE47 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Slc49a3Q8CE47 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC15.66■□□□□ 0.1
Slc49a3Q8CE47 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC15.66■□□□□ 0.1
Slc49a3Q8CE47 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Slc49a3Q8CE47 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Slc49a3Q8CE47 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Slc49a3Q8CE47 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
Slc49a3Q8CE47 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Slc49a3Q8CE47 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Slc49a3Q8CE47 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Slc49a3Q8CE47 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Slc49a3Q8CE47 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Slc49a3Q8CE47 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC15.66■□□□□ 0.1
Slc49a3Q8CE47 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Slc49a3Q8CE47 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Slc49a3Q8CE47 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Slc49a3Q8CE47 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Slc49a3Q8CE47 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Slc49a3Q8CE47 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Slc49a3Q8CE47 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
Slc49a3Q8CE47 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Slc49a3Q8CE47 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Slc49a3Q8CE47 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Slc49a3Q8CE47 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Slc49a3Q8CE47 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Slc49a3Q8CE47 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Slc49a3Q8CE47 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Slc49a3Q8CE47 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms