Protein–RNA interactions for Protein: Q8C4D8

Gm11541, Predicted gene 11541, mousemouse

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm11541Q8C4D8 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Gm11541Q8C4D8 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Gm11541Q8C4D8 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Gm11541Q8C4D8 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Gm11541Q8C4D8 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Gm11541Q8C4D8 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Gm11541Q8C4D8 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
Gm11541Q8C4D8 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC15.35■□□□□ 0.05
Gm11541Q8C4D8 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Gm11541Q8C4D8 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Gm11541Q8C4D8 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Gm11541Q8C4D8 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Gm11541Q8C4D8 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Gm11541Q8C4D8 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Gm11541Q8C4D8 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC15.34■□□□□ 0.05
Gm11541Q8C4D8 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Gm11541Q8C4D8 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Gm11541Q8C4D8 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Gm11541Q8C4D8 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Gm11541Q8C4D8 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Gm11541Q8C4D8 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC15.34■□□□□ 0.05
Gm11541Q8C4D8 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Gm11541Q8C4D8 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Gm11541Q8C4D8 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Gm11541Q8C4D8 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Gm11541Q8C4D8 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Gm11541Q8C4D8 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC15.34■□□□□ 0.05
Gm11541Q8C4D8 Mir1199-201ENSMUST00000117015 119 ntBASIC15.34■□□□□ 0.05
Gm11541Q8C4D8 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Gm11541Q8C4D8 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Gm11541Q8C4D8 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC15.34■□□□□ 0.05
Gm11541Q8C4D8 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC15.34■□□□□ 0.05
Gm11541Q8C4D8 Arhgef33-211ENSMUST00000225658 473 ntBASIC15.34■□□□□ 0.05
Gm11541Q8C4D8 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC15.34■□□□□ 0.05
Gm11541Q8C4D8 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Gm11541Q8C4D8 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Gm11541Q8C4D8 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Gm11541Q8C4D8 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC15.34■□□□□ 0.05
Gm11541Q8C4D8 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Gm11541Q8C4D8 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Gm11541Q8C4D8 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Gm11541Q8C4D8 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Gm11541Q8C4D8 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Gm11541Q8C4D8 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Gm11541Q8C4D8 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Gm11541Q8C4D8 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Gm11541Q8C4D8 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Gm11541Q8C4D8 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Gm11541Q8C4D8 CT010478.1-201ENSMUST00000220747 2787 ntBASIC15.33■□□□□ 0.04
Gm11541Q8C4D8 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Gm11541Q8C4D8 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Gm11541Q8C4D8 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Gm11541Q8C4D8 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Gm11541Q8C4D8 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Gm11541Q8C4D8 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Gm11541Q8C4D8 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Gm11541Q8C4D8 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC15.33■□□□□ 0.04
Gm11541Q8C4D8 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC15.33■□□□□ 0.04
Gm11541Q8C4D8 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC15.33■□□□□ 0.04
Gm11541Q8C4D8 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Gm11541Q8C4D8 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Gm11541Q8C4D8 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Gm11541Q8C4D8 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Gm11541Q8C4D8 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Gm11541Q8C4D8 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Gm11541Q8C4D8 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Gm11541Q8C4D8 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Gm11541Q8C4D8 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Gm11541Q8C4D8 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
Gm11541Q8C4D8 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Gm11541Q8C4D8 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Gm11541Q8C4D8 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC15.32■□□□□ 0.04
Gm11541Q8C4D8 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Gm11541Q8C4D8 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC15.32■□□□□ 0.04
Gm11541Q8C4D8 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Gm11541Q8C4D8 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Gm11541Q8C4D8 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Gm11541Q8C4D8 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Gm11541Q8C4D8 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC15.32■□□□□ 0.04
Gm11541Q8C4D8 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC15.32■□□□□ 0.04
Gm11541Q8C4D8 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Gm11541Q8C4D8 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Gm11541Q8C4D8 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Gm11541Q8C4D8 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Gm11541Q8C4D8 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Gm11541Q8C4D8 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Gm11541Q8C4D8 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gm11541Q8C4D8 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Gm11541Q8C4D8 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Gm11541Q8C4D8 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Gm11541Q8C4D8 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC15.31■□□□□ 0.04
Gm11541Q8C4D8 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gm11541Q8C4D8 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gm11541Q8C4D8 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gm11541Q8C4D8 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gm11541Q8C4D8 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
Gm11541Q8C4D8 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC15.31■□□□□ 0.04
Gm11541Q8C4D8 Gm13181-201ENSMUST00000120117 1069 ntBASIC15.31■□□□□ 0.04
Gm11541Q8C4D8 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gm11541Q8C4D8 Gm10517-202ENSMUST00000192970 758 ntBASIC15.31■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms