Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
Tsen54Q8C2A2 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Tsen54Q8C2A2 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Tsen54Q8C2A2 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Tsen54Q8C2A2 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Tsen54Q8C2A2 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Tsen54Q8C2A2 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Tsen54Q8C2A2 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC14.3□□□□□ -0.12
Tsen54Q8C2A2 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Tsen54Q8C2A2 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Tsen54Q8C2A2 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Tsen54Q8C2A2 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Tsen54Q8C2A2 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Tsen54Q8C2A2 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Tsen54Q8C2A2 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Tsen54Q8C2A2 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Tsen54Q8C2A2 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC14.3□□□□□ -0.12
Tsen54Q8C2A2 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Tsen54Q8C2A2 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tsen54Q8C2A2 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC14.29□□□□□ -0.12
Tsen54Q8C2A2 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Tsen54Q8C2A2 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Tsen54Q8C2A2 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tsen54Q8C2A2 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tsen54Q8C2A2 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tsen54Q8C2A2 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Tsen54Q8C2A2 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tsen54Q8C2A2 Gm12933-201ENSMUST00000120203 872 ntBASIC14.29□□□□□ -0.12
Tsen54Q8C2A2 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC14.29□□□□□ -0.12
Tsen54Q8C2A2 Gm42555-201ENSMUST00000199304 1039 ntBASIC14.29□□□□□ -0.12
Tsen54Q8C2A2 Gm19094-201ENSMUST00000209791 1246 ntBASIC14.29□□□□□ -0.12
Tsen54Q8C2A2 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC14.29□□□□□ -0.12
Tsen54Q8C2A2 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tsen54Q8C2A2 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Tsen54Q8C2A2 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC14.29□□□□□ -0.12
Tsen54Q8C2A2 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tsen54Q8C2A2 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tsen54Q8C2A2 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tsen54Q8C2A2 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Tsen54Q8C2A2 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tsen54Q8C2A2 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tsen54Q8C2A2 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Tsen54Q8C2A2 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tsen54Q8C2A2 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tsen54Q8C2A2 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tsen54Q8C2A2 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Tsen54Q8C2A2 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Tsen54Q8C2A2 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC14.28□□□□□ -0.12
Tsen54Q8C2A2 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tsen54Q8C2A2 Gm7290-201ENSMUST00000104990 617 ntBASIC14.28□□□□□ -0.12
Tsen54Q8C2A2 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Tsen54Q8C2A2 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Tsen54Q8C2A2 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Tsen54Q8C2A2 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Tsen54Q8C2A2 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tsen54Q8C2A2 Gm12918-201ENSMUST00000120234 636 ntBASIC14.28□□□□□ -0.12
Tsen54Q8C2A2 Gm15710-201ENSMUST00000121821 636 ntBASIC14.28□□□□□ -0.12
Tsen54Q8C2A2 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC14.28□□□□□ -0.12
Tsen54Q8C2A2 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC14.28□□□□□ -0.12
Tsen54Q8C2A2 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC14.28□□□□□ -0.12
Tsen54Q8C2A2 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC14.28□□□□□ -0.12
Tsen54Q8C2A2 Gm5075-201ENSMUST00000196916 622 ntBASIC14.28□□□□□ -0.12
Tsen54Q8C2A2 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tsen54Q8C2A2 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
Tsen54Q8C2A2 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tsen54Q8C2A2 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tsen54Q8C2A2 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Tsen54Q8C2A2 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tsen54Q8C2A2 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tsen54Q8C2A2 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC14.28□□□□□ -0.12
Tsen54Q8C2A2 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC14.28□□□□□ -0.12
Tsen54Q8C2A2 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Tsen54Q8C2A2 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tsen54Q8C2A2 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tsen54Q8C2A2 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Tsen54Q8C2A2 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Tsen54Q8C2A2 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC14.28□□□□□ -0.12
Tsen54Q8C2A2 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Tsen54Q8C2A2 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tsen54Q8C2A2 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Tsen54Q8C2A2 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Tsen54Q8C2A2 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Tsen54Q8C2A2 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Tsen54Q8C2A2 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Tsen54Q8C2A2 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC14.27□□□□□ -0.12
Tsen54Q8C2A2 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Tsen54Q8C2A2 AC131586.2-201ENSMUST00000228370 1512 ntBASIC14.27□□□□□ -0.12
Tsen54Q8C2A2 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Tsen54Q8C2A2 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Tsen54Q8C2A2 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Tsen54Q8C2A2 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC14.27□□□□□ -0.13
Tsen54Q8C2A2 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC14.27□□□□□ -0.13
Tsen54Q8C2A2 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC14.27□□□□□ -0.13
Tsen54Q8C2A2 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
Tsen54Q8C2A2 Gm26971-201ENSMUST00000182423 1072 ntBASIC14.27□□□□□ -0.13
Tsen54Q8C2A2 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Tsen54Q8C2A2 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Tsen54Q8C2A2 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Tsen54Q8C2A2 Gm6365-201ENSMUST00000054711 744 ntBASIC14.27□□□□□ -0.13
Tsen54Q8C2A2 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 63.2 ms