Protein–RNA interactions for Protein: Q8BP27

Sfr1, Swi5-dependent recombination DNA repair protein 1 homolog, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sfr1Q8BP27 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sfr1Q8BP27 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sfr1Q8BP27 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Sfr1Q8BP27 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Sfr1Q8BP27 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC17.33■□□□□ 0.37
Sfr1Q8BP27 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Sfr1Q8BP27 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Sfr1Q8BP27 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Sfr1Q8BP27 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Sfr1Q8BP27 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Sfr1Q8BP27 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Sfr1Q8BP27 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Sfr1Q8BP27 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Sfr1Q8BP27 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.36
Sfr1Q8BP27 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Sfr1Q8BP27 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Sfr1Q8BP27 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Sfr1Q8BP27 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sfr1Q8BP27 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sfr1Q8BP27 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Sfr1Q8BP27 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sfr1Q8BP27 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sfr1Q8BP27 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sfr1Q8BP27 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC17.32■□□□□ 0.36
Sfr1Q8BP27 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Sfr1Q8BP27 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sfr1Q8BP27 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sfr1Q8BP27 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sfr1Q8BP27 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sfr1Q8BP27 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sfr1Q8BP27 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Sfr1Q8BP27 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sfr1Q8BP27 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Sfr1Q8BP27 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Sfr1Q8BP27 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Sfr1Q8BP27 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Sfr1Q8BP27 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Sfr1Q8BP27 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sfr1Q8BP27 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sfr1Q8BP27 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Sfr1Q8BP27 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC17.31■□□□□ 0.36
Sfr1Q8BP27 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Sfr1Q8BP27 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Sfr1Q8BP27 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC17.31■□□□□ 0.36
Sfr1Q8BP27 Il3ra-202ENSMUST00000223589 738 ntBASIC17.31■□□□□ 0.36
Sfr1Q8BP27 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sfr1Q8BP27 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sfr1Q8BP27 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sfr1Q8BP27 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sfr1Q8BP27 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sfr1Q8BP27 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sfr1Q8BP27 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC17.31■□□□□ 0.36
Sfr1Q8BP27 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sfr1Q8BP27 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sfr1Q8BP27 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sfr1Q8BP27 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC17.31■□□□□ 0.36
Sfr1Q8BP27 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Sfr1Q8BP27 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Sfr1Q8BP27 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sfr1Q8BP27 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC17.3■□□□□ 0.36
Sfr1Q8BP27 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Sfr1Q8BP27 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sfr1Q8BP27 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sfr1Q8BP27 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sfr1Q8BP27 AC125311.2-201ENSMUST00000227477 1940 ntBASIC17.3■□□□□ 0.36
Sfr1Q8BP27 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sfr1Q8BP27 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Sfr1Q8BP27 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sfr1Q8BP27 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Sfr1Q8BP27 Gm43353-201ENSMUST00000199224 1295 ntBASIC17.3■□□□□ 0.36
Sfr1Q8BP27 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC17.3■□□□□ 0.36
Sfr1Q8BP27 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sfr1Q8BP27 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sfr1Q8BP27 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Sfr1Q8BP27 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sfr1Q8BP27 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sfr1Q8BP27 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC17.29■□□□□ 0.36
Sfr1Q8BP27 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sfr1Q8BP27 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sfr1Q8BP27 AC121598.2-201ENSMUST00000228376 2325 ntBASIC17.29■□□□□ 0.36
Sfr1Q8BP27 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sfr1Q8BP27 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sfr1Q8BP27 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC17.29■□□□□ 0.36
Sfr1Q8BP27 Gm11539-201ENSMUST00000119837 557 ntBASIC17.29■□□□□ 0.36
Sfr1Q8BP27 Gm13436-201ENSMUST00000120418 567 ntBASIC17.29■□□□□ 0.36
Sfr1Q8BP27 Krtap5-1-202ENSMUST00000188274 742 ntBASIC17.29■□□□□ 0.36
Sfr1Q8BP27 Gm43799-201ENSMUST00000201845 579 ntBASIC17.29■□□□□ 0.36
Sfr1Q8BP27 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Sfr1Q8BP27 Gm7791-201ENSMUST00000219066 539 ntBASIC17.29■□□□□ 0.36
Sfr1Q8BP27 AC120002.2-201ENSMUST00000220205 773 ntBASIC17.29■□□□□ 0.36
Sfr1Q8BP27 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sfr1Q8BP27 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Sfr1Q8BP27 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
Sfr1Q8BP27 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sfr1Q8BP27 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sfr1Q8BP27 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sfr1Q8BP27 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sfr1Q8BP27 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sfr1Q8BP27 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sfr1Q8BP27 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms