Protein–RNA interactions for Protein: Q8BGD7

Npas4, Neuronal PAS domain-containing protein 4, mousemouse

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas4Q8BGD7 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Npas4Q8BGD7 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
Npas4Q8BGD7 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Npas4Q8BGD7 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Npas4Q8BGD7 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Npas4Q8BGD7 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC17.94■□□□□ 0.46
Npas4Q8BGD7 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC17.94■□□□□ 0.46
Npas4Q8BGD7 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Npas4Q8BGD7 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Npas4Q8BGD7 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Npas4Q8BGD7 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Npas4Q8BGD7 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Npas4Q8BGD7 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Npas4Q8BGD7 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Npas4Q8BGD7 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Npas4Q8BGD7 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Npas4Q8BGD7 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Npas4Q8BGD7 Gm15372-201ENSMUST00000120729 834 ntBASIC17.93■□□□□ 0.46
Npas4Q8BGD7 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC17.93■□□□□ 0.46
Npas4Q8BGD7 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Npas4Q8BGD7 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC17.93■□□□□ 0.46
Npas4Q8BGD7 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
Npas4Q8BGD7 Gm43514-201ENSMUST00000198852 424 ntBASIC17.93■□□□□ 0.46
Npas4Q8BGD7 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Npas4Q8BGD7 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Npas4Q8BGD7 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Npas4Q8BGD7 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Npas4Q8BGD7 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Npas4Q8BGD7 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Npas4Q8BGD7 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Npas4Q8BGD7 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Npas4Q8BGD7 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC17.93■□□□□ 0.46
Npas4Q8BGD7 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Npas4Q8BGD7 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Npas4Q8BGD7 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Npas4Q8BGD7 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Npas4Q8BGD7 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Npas4Q8BGD7 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Npas4Q8BGD7 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC17.92■□□□□ 0.46
Npas4Q8BGD7 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Npas4Q8BGD7 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC17.92■□□□□ 0.46
Npas4Q8BGD7 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Npas4Q8BGD7 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Npas4Q8BGD7 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Npas4Q8BGD7 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Npas4Q8BGD7 Gm29707-201ENSMUST00000196325 491 ntBASIC17.92■□□□□ 0.46
Npas4Q8BGD7 Gm6443-201ENSMUST00000203599 874 ntBASIC17.92■□□□□ 0.46
Npas4Q8BGD7 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Npas4Q8BGD7 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Npas4Q8BGD7 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
Npas4Q8BGD7 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Npas4Q8BGD7 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Npas4Q8BGD7 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Npas4Q8BGD7 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Npas4Q8BGD7 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC17.92■□□□□ 0.46
Npas4Q8BGD7 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Npas4Q8BGD7 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Npas4Q8BGD7 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Npas4Q8BGD7 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Npas4Q8BGD7 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Npas4Q8BGD7 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Npas4Q8BGD7 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Npas4Q8BGD7 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC17.91■□□□□ 0.46
Npas4Q8BGD7 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
Npas4Q8BGD7 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
Npas4Q8BGD7 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC17.91■□□□□ 0.46
Npas4Q8BGD7 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC17.91■□□□□ 0.46
Npas4Q8BGD7 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Npas4Q8BGD7 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC17.91■□□□□ 0.46
Npas4Q8BGD7 Gm44450-201ENSMUST00000199528 114 ntBASIC17.91■□□□□ 0.46
Npas4Q8BGD7 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Npas4Q8BGD7 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Npas4Q8BGD7 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Npas4Q8BGD7 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Npas4Q8BGD7 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC17.91■□□□□ 0.46
Npas4Q8BGD7 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Npas4Q8BGD7 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Npas4Q8BGD7 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Npas4Q8BGD7 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Npas4Q8BGD7 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Npas4Q8BGD7 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Npas4Q8BGD7 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Npas4Q8BGD7 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Npas4Q8BGD7 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Npas4Q8BGD7 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Npas4Q8BGD7 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC17.9■□□□□ 0.46
Npas4Q8BGD7 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Npas4Q8BGD7 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Npas4Q8BGD7 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Npas4Q8BGD7 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Npas4Q8BGD7 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC17.9■□□□□ 0.46
Npas4Q8BGD7 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Npas4Q8BGD7 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Npas4Q8BGD7 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Npas4Q8BGD7 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Npas4Q8BGD7 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
Npas4Q8BGD7 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Npas4Q8BGD7 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Npas4Q8BGD7 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC17.89■□□□□ 0.45
Npas4Q8BGD7 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms