Protein–RNA interactions for Protein: Q6Q899

Ddx58, Probable ATP-dependent RNA helicase DDX58, mousemouse

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx58Q6Q899 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC21.1■□□□□ 0.97
Ddx58Q6Q899 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ddx58Q6Q899 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ddx58Q6Q899 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ddx58Q6Q899 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ddx58Q6Q899 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC21.1■□□□□ 0.97
Ddx58Q6Q899 Zcchc6-207ENSMUST00000225576 2499 ntBASIC21.1■□□□□ 0.97
Ddx58Q6Q899 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Ddx58Q6Q899 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Ddx58Q6Q899 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ddx58Q6Q899 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ddx58Q6Q899 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ddx58Q6Q899 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Ddx58Q6Q899 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Ddx58Q6Q899 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ddx58Q6Q899 AC130713.1-201ENSMUST00000228853 1096 ntBASIC21.09■□□□□ 0.97
Ddx58Q6Q899 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ddx58Q6Q899 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ddx58Q6Q899 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ddx58Q6Q899 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC21.09■□□□□ 0.97
Ddx58Q6Q899 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ddx58Q6Q899 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ddx58Q6Q899 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ddx58Q6Q899 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ddx58Q6Q899 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ddx58Q6Q899 Fcho2-208ENSMUST00000224992 2964 ntBASIC21.09■□□□□ 0.97
Ddx58Q6Q899 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ddx58Q6Q899 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ddx58Q6Q899 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ddx58Q6Q899 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ddx58Q6Q899 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ddx58Q6Q899 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ddx58Q6Q899 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ddx58Q6Q899 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Ddx58Q6Q899 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC21.08■□□□□ 0.97
Ddx58Q6Q899 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ddx58Q6Q899 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ddx58Q6Q899 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Ddx58Q6Q899 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Ddx58Q6Q899 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC21.08■□□□□ 0.96
Ddx58Q6Q899 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Ddx58Q6Q899 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Ddx58Q6Q899 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ddx58Q6Q899 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
Ddx58Q6Q899 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Ddx58Q6Q899 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ddx58Q6Q899 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ddx58Q6Q899 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ddx58Q6Q899 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Ddx58Q6Q899 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
Ddx58Q6Q899 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC21.07■□□□□ 0.96
Ddx58Q6Q899 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC21.07■□□□□ 0.96
Ddx58Q6Q899 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ddx58Q6Q899 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ddx58Q6Q899 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ddx58Q6Q899 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ddx58Q6Q899 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Ddx58Q6Q899 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ddx58Q6Q899 Tfap2a-209ENSMUST00000225180 1828 ntBASIC21.06■□□□□ 0.96
Ddx58Q6Q899 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Ddx58Q6Q899 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ddx58Q6Q899 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ddx58Q6Q899 Gm11336-201ENSMUST00000118168 334 ntBASIC21.06■□□□□ 0.96
Ddx58Q6Q899 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Ddx58Q6Q899 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ddx58Q6Q899 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ddx58Q6Q899 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ddx58Q6Q899 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Ddx58Q6Q899 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Ddx58Q6Q899 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC21.06■□□□□ 0.96
Ddx58Q6Q899 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ddx58Q6Q899 Gm43182-201ENSMUST00000199476 2528 ntBASIC21.06■□□□□ 0.96
Ddx58Q6Q899 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ddx58Q6Q899 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ddx58Q6Q899 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Ddx58Q6Q899 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ddx58Q6Q899 Phf7-203ENSMUST00000226565 1971 ntBASIC21.05■□□□□ 0.96
Ddx58Q6Q899 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Ddx58Q6Q899 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ddx58Q6Q899 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ddx58Q6Q899 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC21.05■□□□□ 0.96
Ddx58Q6Q899 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC21.05■□□□□ 0.96
Ddx58Q6Q899 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ddx58Q6Q899 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC21.05■□□□□ 0.96
Ddx58Q6Q899 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC21.05■□□□□ 0.96
Ddx58Q6Q899 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ddx58Q6Q899 Gm6190-201ENSMUST00000220683 1374 ntBASIC21.05■□□□□ 0.96
Ddx58Q6Q899 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Ddx58Q6Q899 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ddx58Q6Q899 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Ddx58Q6Q899 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ddx58Q6Q899 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Ddx58Q6Q899 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Ddx58Q6Q899 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ddx58Q6Q899 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ddx58Q6Q899 Gm9103-201ENSMUST00000119371 405 ntBASIC21.04■□□□□ 0.96
Ddx58Q6Q899 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC21.04■□□□□ 0.96
Ddx58Q6Q899 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ddx58Q6Q899 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ddx58Q6Q899 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 85.5 ms