Protein–RNA interactions for Protein: Q6PDG5

Smarcc2, SWI/SNF complex subunit SMARCC2, mousemouse

Predictions only

Length 1,213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc2Q6PDG5 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Smarcc2Q6PDG5 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Smarcc2Q6PDG5 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Smarcc2Q6PDG5 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Smarcc2Q6PDG5 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Smarcc2Q6PDG5 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Smarcc2Q6PDG5 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Smarcc2Q6PDG5 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Smarcc2Q6PDG5 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Smarcc2Q6PDG5 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Smarcc2Q6PDG5 Gm11841-201ENSMUST00000117060 1963 ntBASIC19.9■□□□□ 0.78
Smarcc2Q6PDG5 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Smarcc2Q6PDG5 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Smarcc2Q6PDG5 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Smarcc2Q6PDG5 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Smarcc2Q6PDG5 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC19.9■□□□□ 0.78
Smarcc2Q6PDG5 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Smarcc2Q6PDG5 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Smarcc2Q6PDG5 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Smarcc2Q6PDG5 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Smarcc2Q6PDG5 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.77
Smarcc2Q6PDG5 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC19.89■□□□□ 0.77
Smarcc2Q6PDG5 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC19.89■□□□□ 0.77
Smarcc2Q6PDG5 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Smarcc2Q6PDG5 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Smarcc2Q6PDG5 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
Smarcc2Q6PDG5 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Smarcc2Q6PDG5 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Smarcc2Q6PDG5 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Smarcc2Q6PDG5 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Smarcc2Q6PDG5 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Smarcc2Q6PDG5 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Smarcc2Q6PDG5 AC153881.2-201ENSMUST00000214877 204 ntBASIC19.88■□□□□ 0.77
Smarcc2Q6PDG5 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Smarcc2Q6PDG5 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC19.88■□□□□ 0.77
Smarcc2Q6PDG5 Gm45244-201ENSMUST00000211328 2200 ntBASIC19.88■□□□□ 0.77
Smarcc2Q6PDG5 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Smarcc2Q6PDG5 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Smarcc2Q6PDG5 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Smarcc2Q6PDG5 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Smarcc2Q6PDG5 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Smarcc2Q6PDG5 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Smarcc2Q6PDG5 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Smarcc2Q6PDG5 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Smarcc2Q6PDG5 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Smarcc2Q6PDG5 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC19.87■□□□□ 0.77
Smarcc2Q6PDG5 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Smarcc2Q6PDG5 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
Smarcc2Q6PDG5 Gm17661-201ENSMUST00000170317 270 ntBASIC19.87■□□□□ 0.77
Smarcc2Q6PDG5 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Smarcc2Q6PDG5 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC19.87■□□□□ 0.77
Smarcc2Q6PDG5 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Smarcc2Q6PDG5 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Smarcc2Q6PDG5 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Smarcc2Q6PDG5 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Smarcc2Q6PDG5 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Smarcc2Q6PDG5 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Smarcc2Q6PDG5 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Smarcc2Q6PDG5 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Smarcc2Q6PDG5 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC19.86■□□□□ 0.77
Smarcc2Q6PDG5 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Smarcc2Q6PDG5 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Smarcc2Q6PDG5 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Smarcc2Q6PDG5 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Smarcc2Q6PDG5 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Smarcc2Q6PDG5 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Smarcc2Q6PDG5 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Smarcc2Q6PDG5 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Smarcc2Q6PDG5 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Smarcc2Q6PDG5 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Smarcc2Q6PDG5 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC19.86■□□□□ 0.77
Smarcc2Q6PDG5 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Smarcc2Q6PDG5 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Smarcc2Q6PDG5 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Smarcc2Q6PDG5 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Smarcc2Q6PDG5 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Smarcc2Q6PDG5 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Smarcc2Q6PDG5 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Smarcc2Q6PDG5 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC19.85■□□□□ 0.77
Smarcc2Q6PDG5 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Smarcc2Q6PDG5 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Smarcc2Q6PDG5 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Smarcc2Q6PDG5 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Smarcc2Q6PDG5 Gm38027-201ENSMUST00000192315 235 ntBASIC19.85■□□□□ 0.77
Smarcc2Q6PDG5 Gm43799-201ENSMUST00000201845 579 ntBASIC19.85■□□□□ 0.77
Smarcc2Q6PDG5 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Smarcc2Q6PDG5 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Smarcc2Q6PDG5 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Smarcc2Q6PDG5 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Smarcc2Q6PDG5 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Smarcc2Q6PDG5 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Smarcc2Q6PDG5 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Smarcc2Q6PDG5 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC19.84■□□□□ 0.77
Smarcc2Q6PDG5 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Smarcc2Q6PDG5 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Smarcc2Q6PDG5 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Smarcc2Q6PDG5 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Smarcc2Q6PDG5 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Smarcc2Q6PDG5 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC19.84■□□□□ 0.77
Smarcc2Q6PDG5 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms