Protein–RNA interactions for Protein: Q61382

Traf4, TNF receptor-associated factor 4, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf4Q61382 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Traf4Q61382 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Traf4Q61382 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Traf4Q61382 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Traf4Q61382 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Traf4Q61382 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Traf4Q61382 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Traf4Q61382 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC15.13■□□□□ 0.01
Traf4Q61382 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC15.13■□□□□ 0.01
Traf4Q61382 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Traf4Q61382 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Traf4Q61382 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC15.13■□□□□ 0.01
Traf4Q61382 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Traf4Q61382 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC15.13■□□□□ 0.01
Traf4Q61382 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Traf4Q61382 AC166341.7-201ENSMUST00000221698 126 ntBASIC15.13■□□□□ 0.01
Traf4Q61382 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC15.13■□□□□ 0.01
Traf4Q61382 Timm23-208ENSMUST00000226683 750 ntBASIC15.13■□□□□ 0.01
Traf4Q61382 Odf3b-204ENSMUST00000227834 930 ntBASIC15.13■□□□□ 0.01
Traf4Q61382 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Traf4Q61382 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Traf4Q61382 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Traf4Q61382 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Traf4Q61382 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Traf4Q61382 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Traf4Q61382 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Traf4Q61382 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Traf4Q61382 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Traf4Q61382 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
Traf4Q61382 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Traf4Q61382 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Traf4Q61382 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Traf4Q61382 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Traf4Q61382 Gm7712-202ENSMUST00000222331 1510 ntBASIC15.12■□□□□ 0.01
Traf4Q61382 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Traf4Q61382 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Traf4Q61382 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Traf4Q61382 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Traf4Q61382 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Traf4Q61382 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Traf4Q61382 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Traf4Q61382 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Traf4Q61382 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Traf4Q61382 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Traf4Q61382 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Traf4Q61382 Gm26917-202ENSMUST00000192833 3329 ntBASIC15.12■□□□□ 0.01
Traf4Q61382 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Traf4Q61382 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Traf4Q61382 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Traf4Q61382 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Traf4Q61382 Shroom3-211ENSMUST00000225438 5742 ntBASIC15.12■□□□□ 0.01
Traf4Q61382 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Traf4Q61382 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC15.12■□□□□ 0.01
Traf4Q61382 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Traf4Q61382 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
Traf4Q61382 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Traf4Q61382 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Traf4Q61382 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Traf4Q61382 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
Traf4Q61382 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Traf4Q61382 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Traf4Q61382 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Traf4Q61382 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Traf4Q61382 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
Traf4Q61382 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Traf4Q61382 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
Traf4Q61382 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Traf4Q61382 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Traf4Q61382 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Traf4Q61382 AC069562.2-201ENSMUST00000224644 2146 ntBASIC15.11■□□□□ 0.01
Traf4Q61382 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Traf4Q61382 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Traf4Q61382 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
Traf4Q61382 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Traf4Q61382 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Traf4Q61382 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Traf4Q61382 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Traf4Q61382 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Traf4Q61382 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Traf4Q61382 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Traf4Q61382 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Traf4Q61382 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Traf4Q61382 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC15.1■□□□□ 0.01
Traf4Q61382 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Traf4Q61382 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC15.1■□□□□ 0.01
Traf4Q61382 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Traf4Q61382 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Traf4Q61382 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Traf4Q61382 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Traf4Q61382 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC15.1■□□□□ 0.01
Traf4Q61382 Gm14026-201ENSMUST00000120625 1789 ntBASIC15.1■□□□□ 0.01
Traf4Q61382 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC15.1■□□□□ 0.01
Traf4Q61382 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Traf4Q61382 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Traf4Q61382 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Traf4Q61382 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Traf4Q61382 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Traf4Q61382 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Traf4Q61382 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Traf4Q61382 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms