Protein–RNA interactions for Protein: Q5R1I9

Trav2, T cell receptor alpha variable 2 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav2Q5R1I9 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trav2Q5R1I9 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC13.63□□□□□ -0.23
Trav2Q5R1I9 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
Trav2Q5R1I9 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC13.63□□□□□ -0.23
Trav2Q5R1I9 Gm27389-201ENSMUST00000183622 195 ntBASIC13.63□□□□□ -0.23
Trav2Q5R1I9 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Trav2Q5R1I9 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav2Q5R1I9 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav2Q5R1I9 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC13.63□□□□□ -0.23
Trav2Q5R1I9 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav2Q5R1I9 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav2Q5R1I9 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC13.63□□□□□ -0.23
Trav2Q5R1I9 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Trav2Q5R1I9 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Trav2Q5R1I9 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Trav2Q5R1I9 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav2Q5R1I9 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav2Q5R1I9 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav2Q5R1I9 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav2Q5R1I9 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav2Q5R1I9 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav2Q5R1I9 Gm18958-201ENSMUST00000174258 762 ntBASIC13.62□□□□□ -0.23
Trav2Q5R1I9 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC13.62□□□□□ -0.23
Trav2Q5R1I9 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
Trav2Q5R1I9 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Trav2Q5R1I9 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Trav2Q5R1I9 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC13.62□□□□□ -0.23
Trav2Q5R1I9 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav2Q5R1I9 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav2Q5R1I9 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav2Q5R1I9 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trav2Q5R1I9 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav2Q5R1I9 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC13.62□□□□□ -0.23
Trav2Q5R1I9 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav2Q5R1I9 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trav2Q5R1I9 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav2Q5R1I9 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav2Q5R1I9 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav2Q5R1I9 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav2Q5R1I9 Spsb2-203ENSMUST00000112473 1322 ntBASIC13.62□□□□□ -0.23
Trav2Q5R1I9 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trav2Q5R1I9 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav2Q5R1I9 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav2Q5R1I9 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trav2Q5R1I9 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav2Q5R1I9 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav2Q5R1I9 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav2Q5R1I9 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Trav2Q5R1I9 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trav2Q5R1I9 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trav2Q5R1I9 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav2Q5R1I9 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trav2Q5R1I9 Gm23634-201ENSMUST00000175071 91 ntBASIC13.61□□□□□ -0.23
Trav2Q5R1I9 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trav2Q5R1I9 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav2Q5R1I9 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trav2Q5R1I9 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav2Q5R1I9 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav2Q5R1I9 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC13.61□□□□□ -0.23
Trav2Q5R1I9 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trav2Q5R1I9 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trav2Q5R1I9 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav2Q5R1I9 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav2Q5R1I9 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav2Q5R1I9 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Trav2Q5R1I9 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav2Q5R1I9 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC13.61□□□□□ -0.23
Trav2Q5R1I9 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC13.61□□□□□ -0.23
Trav2Q5R1I9 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Trav2Q5R1I9 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav2Q5R1I9 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav2Q5R1I9 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav2Q5R1I9 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav2Q5R1I9 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav2Q5R1I9 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav2Q5R1I9 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav2Q5R1I9 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC13.6□□□□□ -0.23
Trav2Q5R1I9 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav2Q5R1I9 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trav2Q5R1I9 Mir1668-201ENSMUST00000184114 107 ntBASIC13.6□□□□□ -0.23
Trav2Q5R1I9 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trav2Q5R1I9 Gm7370-201ENSMUST00000219471 767 ntBASIC13.6□□□□□ -0.23
Trav2Q5R1I9 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC13.6□□□□□ -0.23
Trav2Q5R1I9 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav2Q5R1I9 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
Trav2Q5R1I9 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC13.6□□□□□ -0.23
Trav2Q5R1I9 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Trav2Q5R1I9 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Trav2Q5R1I9 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav2Q5R1I9 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trav2Q5R1I9 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav2Q5R1I9 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav2Q5R1I9 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav2Q5R1I9 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC13.59□□□□□ -0.23
Trav2Q5R1I9 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav2Q5R1I9 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC13.59□□□□□ -0.23
Trav2Q5R1I9 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav2Q5R1I9 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav2Q5R1I9 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav2Q5R1I9 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms