Protein–RNA interactions for Protein: Q5R1I4

Trav6-2, T cell receptor alpha variable 6-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-2Q5R1I4 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
Trav6-2Q5R1I4 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Trav6-2Q5R1I4 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC15□□□□□ -0.01
Trav6-2Q5R1I4 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav6-2Q5R1I4 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav6-2Q5R1I4 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trav6-2Q5R1I4 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav6-2Q5R1I4 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav6-2Q5R1I4 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Trav6-2Q5R1I4 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Trav6-2Q5R1I4 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav6-2Q5R1I4 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav6-2Q5R1I4 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trav6-2Q5R1I4 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Trav6-2Q5R1I4 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav6-2Q5R1I4 Grk6-206ENSMUST00000224995 2971 ntBASIC14.99□□□□□ -0.01
Trav6-2Q5R1I4 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC14.99□□□□□ -0.01
Trav6-2Q5R1I4 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Trav6-2Q5R1I4 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav6-2Q5R1I4 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Trav6-2Q5R1I4 Gm7153-201ENSMUST00000117092 455 ntBASIC14.99□□□□□ -0.01
Trav6-2Q5R1I4 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav6-2Q5R1I4 Gm27357-201ENSMUST00000183754 135 ntBASIC14.99□□□□□ -0.01
Trav6-2Q5R1I4 Ighv6-1-201ENSMUST00000193612 343 ntBASIC14.99□□□□□ -0.01
Trav6-2Q5R1I4 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC14.99□□□□□ -0.01
Trav6-2Q5R1I4 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav6-2Q5R1I4 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Trav6-2Q5R1I4 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav6-2Q5R1I4 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trav6-2Q5R1I4 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav6-2Q5R1I4 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav6-2Q5R1I4 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav6-2Q5R1I4 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav6-2Q5R1I4 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav6-2Q5R1I4 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav6-2Q5R1I4 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav6-2Q5R1I4 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trav6-2Q5R1I4 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav6-2Q5R1I4 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav6-2Q5R1I4 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav6-2Q5R1I4 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav6-2Q5R1I4 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav6-2Q5R1I4 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav6-2Q5R1I4 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC14.98□□□□□ -0.01
Trav6-2Q5R1I4 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC14.98□□□□□ -0.01
Trav6-2Q5R1I4 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
Trav6-2Q5R1I4 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav6-2Q5R1I4 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC14.98□□□□□ -0.01
Trav6-2Q5R1I4 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trav6-2Q5R1I4 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Trav6-2Q5R1I4 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav6-2Q5R1I4 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav6-2Q5R1I4 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trav6-2Q5R1I4 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC14.97□□□□□ -0.01
Trav6-2Q5R1I4 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav6-2Q5R1I4 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Trav6-2Q5R1I4 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav6-2Q5R1I4 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Trav6-2Q5R1I4 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trav6-2Q5R1I4 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav6-2Q5R1I4 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav6-2Q5R1I4 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trav6-2Q5R1I4 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav6-2Q5R1I4 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trav6-2Q5R1I4 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav6-2Q5R1I4 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trav6-2Q5R1I4 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trav6-2Q5R1I4 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
Trav6-2Q5R1I4 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav6-2Q5R1I4 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trav6-2Q5R1I4 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav6-2Q5R1I4 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Trav6-2Q5R1I4 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav6-2Q5R1I4 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav6-2Q5R1I4 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC14.96□□□□□ -0.01
Trav6-2Q5R1I4 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav6-2Q5R1I4 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav6-2Q5R1I4 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav6-2Q5R1I4 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Trav6-2Q5R1I4 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC14.96□□□□□ -0.01
Trav6-2Q5R1I4 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trav6-2Q5R1I4 Umpk-ps-201ENSMUST00000211897 827 ntBASIC14.96□□□□□ -0.01
Trav6-2Q5R1I4 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Trav6-2Q5R1I4 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Trav6-2Q5R1I4 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Trav6-2Q5R1I4 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav6-2Q5R1I4 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC14.96□□□□□ -0.01
Trav6-2Q5R1I4 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Trav6-2Q5R1I4 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC14.96□□□□□ -0.02
Trav6-2Q5R1I4 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav6-2Q5R1I4 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Trav6-2Q5R1I4 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav6-2Q5R1I4 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trav6-2Q5R1I4 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav6-2Q5R1I4 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav6-2Q5R1I4 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trav6-2Q5R1I4 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav6-2Q5R1I4 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav6-2Q5R1I4 Gm11336-201ENSMUST00000118168 334 ntBASIC14.95□□□□□ -0.02
Trav6-2Q5R1I4 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC14.95□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms