Protein–RNA interactions for Protein: Q5R1I1

Trav7d-3, T cell receptor alpha variable 7-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7d-3Q5R1I1 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav7d-3Q5R1I1 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav7d-3Q5R1I1 Dio3-201ENSMUST00000097228 1449 ntBASIC12.56□□□□□ -0.4
Trav7d-3Q5R1I1 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav7d-3Q5R1I1 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav7d-3Q5R1I1 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav7d-3Q5R1I1 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trav7d-3Q5R1I1 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Trav7d-3Q5R1I1 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav7d-3Q5R1I1 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav7d-3Q5R1I1 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav7d-3Q5R1I1 Gm37820-201ENSMUST00000194021 2147 ntBASIC12.56□□□□□ -0.4
Trav7d-3Q5R1I1 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav7d-3Q5R1I1 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trav7d-3Q5R1I1 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav7d-3Q5R1I1 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC12.56□□□□□ -0.4
Trav7d-3Q5R1I1 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav7d-3Q5R1I1 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Trav7d-3Q5R1I1 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav7d-3Q5R1I1 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav7d-3Q5R1I1 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav7d-3Q5R1I1 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav7d-3Q5R1I1 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC12.55□□□□□ -0.4
Trav7d-3Q5R1I1 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav7d-3Q5R1I1 Gm43859-201ENSMUST00000200075 1412 ntBASIC12.55□□□□□ -0.4
Trav7d-3Q5R1I1 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav7d-3Q5R1I1 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav7d-3Q5R1I1 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav7d-3Q5R1I1 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav7d-3Q5R1I1 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav7d-3Q5R1I1 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Trav7d-3Q5R1I1 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trav7d-3Q5R1I1 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav7d-3Q5R1I1 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav7d-3Q5R1I1 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trav7d-3Q5R1I1 Gm13401-201ENSMUST00000117074 291 ntBASIC12.55□□□□□ -0.4
Trav7d-3Q5R1I1 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trav7d-3Q5R1I1 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trav7d-3Q5R1I1 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trav7d-3Q5R1I1 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav7d-3Q5R1I1 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC12.55□□□□□ -0.4
Trav7d-3Q5R1I1 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav7d-3Q5R1I1 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav7d-3Q5R1I1 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trav7d-3Q5R1I1 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav7d-3Q5R1I1 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav7d-3Q5R1I1 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
Trav7d-3Q5R1I1 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC12.55□□□□□ -0.4
Trav7d-3Q5R1I1 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Trav7d-3Q5R1I1 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trav7d-3Q5R1I1 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trav7d-3Q5R1I1 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav7d-3Q5R1I1 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trav7d-3Q5R1I1 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trav7d-3Q5R1I1 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav7d-3Q5R1I1 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trav7d-3Q5R1I1 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trav7d-3Q5R1I1 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav7d-3Q5R1I1 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav7d-3Q5R1I1 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trav7d-3Q5R1I1 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav7d-3Q5R1I1 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav7d-3Q5R1I1 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trav7d-3Q5R1I1 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC12.54□□□□□ -0.4
Trav7d-3Q5R1I1 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav7d-3Q5R1I1 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav7d-3Q5R1I1 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC12.54□□□□□ -0.4
Trav7d-3Q5R1I1 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC12.54□□□□□ -0.4
Trav7d-3Q5R1I1 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Trav7d-3Q5R1I1 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC12.54□□□□□ -0.4
Trav7d-3Q5R1I1 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav7d-3Q5R1I1 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav7d-3Q5R1I1 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav7d-3Q5R1I1 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trav7d-3Q5R1I1 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav7d-3Q5R1I1 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
Trav7d-3Q5R1I1 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav7d-3Q5R1I1 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trav7d-3Q5R1I1 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
Trav7d-3Q5R1I1 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trav7d-3Q5R1I1 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav7d-3Q5R1I1 Gm44443-201ENSMUST00000204396 5633 ntBASIC12.54□□□□□ -0.4
Trav7d-3Q5R1I1 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trav7d-3Q5R1I1 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav7d-3Q5R1I1 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Trav7d-3Q5R1I1 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Trav7d-3Q5R1I1 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav7d-3Q5R1I1 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav7d-3Q5R1I1 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav7d-3Q5R1I1 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav7d-3Q5R1I1 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav7d-3Q5R1I1 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Trav7d-3Q5R1I1 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav7d-3Q5R1I1 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav7d-3Q5R1I1 Ptprs-211ENSMUST00000223859 5588 ntBASIC12.53□□□□□ -0.4
Trav7d-3Q5R1I1 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC12.53□□□□□ -0.4
Trav7d-3Q5R1I1 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC12.53□□□□□ -0.4
Trav7d-3Q5R1I1 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav7d-3Q5R1I1 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav7d-3Q5R1I1 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms